>A8MYJ7 (163 residues) GQPRQALGYCSLSVLASGSSACHLRLRATCLAELQEFGRALRDLDHVLQEALGDGDLPRR AEDFCRQGRLLLSLGDEAAAAGAFAQALKLAPSLAQNSLCRQPGRAPTARMFLLRGQCCL EEQRHAEAWTAVESGLLVDPDHRGLKRLKARIRREASSGCWLQ |
Sequence |
20 40 60 80 100 120 140 160 | | | | | | | | GQPRQALGYCSLSVLASGSSACHLRLRATCLAELQEFGRALRDLDHVLQEALGDGDLPRRAEDFCRQGRLLLSLGDEAAAAGAFAQALKLAPSLAQNSLCRQPGRAPTARMFLLRGQCCLEEQRHAEAWTAVESGLLVDPDHRGLKRLKARIRREASSGCWLQ |
Prediction | CCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCHHHHHHHCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCC |
Confidence | 9899999999999985999899999999999998489999999999996188886324789999999999999099999999999999849863677887321036999999999999999788999999999999879899999999999997741366559 |
H:Helix; S:Strand; C:Coil | |
Sequence |
20 40 60 80 100 120 140 160 | | | | | | | | GQPRQALGYCSLSVLASGSSACHLRLRATCLAELQEFGRALRDLDHVLQEALGDGDLPRRAEDFCRQGRLLLSLGDEAAAAGAFAQALKLAPSLAQNSLCRQPGRAPTARMFLLRGQCCLEEQRHAEAWTAVESGLLVDPDHRGLKRLKARIRREASSGCWLQ |
Prediction | 8536401620240062247214101210300430561650160034006234745513530430032020133155165016004400611373332214544444411420252044125474154015103300410372450341324053426450447 |
Values range from 0 (buried residue) to 8 (highly exposed residue) | |
Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Downloadalignment | 20 40 60 80 100 120 140 160 | | | | | | | | | |||||||||||||
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SS Seq | CCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCHHHHHHHCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCC GQPRQALGYCSLSVLASGSSACHLRLRATCLAELQEFGRALRDLDHVLQEALGDGDLPRRAEDFCRQGRLLLSLGDEAAAAGAFAQALKLAPSLAQNSLCRQPGRAPTARMFLLRGQCCLEEQRHAEAWTAVESGLLVDPDHRGLKRLKARIRREASSGCWLQ | |||||||||||||||||||
1 | 3sf4A | 0.16 | 0.15 | 4.90 | 1.33 | DEthreader | GNFRDAVIAHEQRLLIAKKERRAYSNLGNAYIFLGEFETASEYYKKTLLLARQLKDRAVEAQSCYSLGNTYTLLQDYEKAIDYHLKHLAIAQLNDRI---------GEGRACWSLGNAYTALGNHDQAMHFAEKHLEISRKELTARLNLSDLQMVLGLSY--- | |||||||||||||
2 | 4ui9C3 | 0.08 | 0.07 | 2.70 | 1.44 | SPARKS-K | SMKSELSYLAHNLCEIDKYRVETCCVIGNYYSLRSQHEKAALYFQRALKLNPR------YLGAWTLMGHEYMEMKNTSAAIQAYRHAIEVNKRDY--------------RAWYGLGQTYEILKMPFYCLYYYRRAHQLRPNDSRMLVALGECYEKLNQLVEAK | |||||||||||||
3 | 3uq3A | 0.16 | 0.16 | 5.29 | 0.47 | MapAlign | RQFDEAIEHYNKAWELH-KDITYLNNRAAAEYEKGEYETAISTLNDAVEQGREMRAYKVISKSFARIGNAYHKLGDLKKTIEYYQKSLTEHTADILTKLRMIKRAPEDARGYSNRAAALAKLMSFPEAIADCNKAIEKDPNFVRAYIRKATAQIAVKEYASA- | |||||||||||||
4 | 4a1sA | 0.15 | 0.14 | 4.76 | 0.31 | CEthreader | EALTRAVEFYQENLKLMGAQGRACGNLGNTYYLLGDFQAAIEHHQERLRIAREFGDRAAERRANSNLGNSHIFLGQFEDAAEHYKRTLALAVELGE--------REVEAQSCYSLGNTYTLLHEFNTAIEYHNRHLAIAQELARACWSLGNAHSAIGGHERAL | |||||||||||||
5 | 5aemA1 | 0.10 | 0.09 | 3.17 | 1.34 | MUSTER | NDLQVAERLFNEVIKKDARNFAAYETLGDIYQLQGRLNDCCNSWFLAAHLN------ASDWEFWKIVAILSADLDHVRQAIYCFSRVISLNPME--------------WESIYRRSMLYKKTGQLARALDGFQRLYMYNPYDANILRELAILYVDYDR----- | |||||||||||||
6 | 3pe3A | 0.16 | 0.13 | 4.51 | 0.61 | HHsearch | GNIEEAVRLYRKALEVFPEFAAAHSNLASVLQQQGKLQEALMHYKEAIRISPT------FADAYSNMGNTLKEMQDVQGALQCYTRAIQINPAFA--------------DAHSNLASIHKDSGNIPEAIASYRTALKLKPDFPDAYCNLAHCLQIVCD--WTD | |||||||||||||
7 | 6vbu42 | 0.17 | 0.15 | 4.85 | 2.06 | FFAS-3D | -DLDKAIEIYKKAVEFSPENTELLTTLGLLYLQLGIYQKAFEHLGNTLTYDPTACAVIESPPLWNNIGMCFFGKKKYVAAISCLKRANYLAPLDWKI--------------LYNLGLVHLTMQQYASAFHFLSAAINFQPKMGELYMLLAVALTNLED----- | |||||||||||||
8 | 3txmA | 0.10 | 0.09 | 3.44 | 0.57 | EigenThreader | AGTGIEVQLCKDCIEWAKQEQSLEARLIALYFDTALYTEALALGAQLLRELKKLDDKNLLVEVQLLESKTYHALSNLPKARAALTSARTTANAI-------YCPPKVQGALDLQSGILHAADEDFKTAFSYFYEAFEGFDSVDTSLKYMLLCKIMLGQSDDVN | |||||||||||||
9 | 4rg6A | 0.12 | 0.12 | 4.10 | 1.13 | CNFpred | REHDIAIKFFQRAIQVDPNYAYAYTLLGHEFVLTEELDKALACFRNAIRVN------PRHYNAWYGLGMIYYKQEKFSLAEMHFQKALDINPQSSVLLCHIGV-DPKNPLCKFHRASVLFANEKYKSALQELEELKQIVPKESLVYFLIGKVYKKLGQTHLAL | |||||||||||||
10 | 4a1sA | 0.13 | 0.12 | 4.23 | 1.33 | DEthreader | VALTRAVEFYQENLKLMRRQGRACGNLGNTYYLLGDFQAAIEHHQERLRIAREFGDRAAERRANSNLGNSHIFLGQFEDAAEHYKRTLALAVLGERE---------VEAQSCYSLGNTYTLLHEFNTAIEYHNRHLAIAQREARACWSLGNAHSAIGG----- | |||||||||||||
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Top 10 structural analogs in PDB (as identified by
TM-align)
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Top 5 enzyme homologs in PDB
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Template proteins with similar binding site:
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References: | |
1. | Wei Zheng, Chengxin Zhang, Yang Li, Robin Pearce, Eric W. Bell, Yang Zhang. Folding non-homology proteins by coupling deep-learning contact maps with I-TASSER assembly simulations. In preparation, 2020. |