Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Downloadalignment | | 20 40 60 80 100 120 140
| | | | | | | |
| SS Seq | CCCCSSSCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCHHHSHHHCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC QRMIISRHLPSVSSLPFHPQLHPQQMIISRHLPSVCGGRFHPQQMIISRHLPSVSSLPFHPQLHPQQMIISRHLPSVCGGRFHPQRMIISRHLPSVSSLPFHPQLHPQQMIISRHLPSVCGERLRGPLPPSADDNLKTPSERQLTPLPPSAPPSA |
1 | 6yw7C | 0.07 | 0.07 | 2.92 | 0.51 | CEthreader | | NGHITGIDWAPKSDRIVTCGADRNAYVWSQKDGVKPTLVILRINRAATFVKWSPLENKFAVGSGARLISVCYFESENDWWVSKHIKKPIRSTVLSLDWHPNNVLLAARVFSAYIKEVDEKPASTPWGSKMPFGQLMSEFGGSGTGGWVHGVSFSA |
2 | 3c98B | 0.05 | 0.05 | 2.39 | 0.52 | EigenThreader | | QVEEIRGFIDKIAENVTANKVRSKLKSIEQSIEQEEGRKTQHSTLSRKFVEVMSEYNATQSDYRERCKGRIQRQLEITGRTTTSEELEDMLESGNPAIFASGIIMISKQALSEIETRHSEIIKLENSIRELHDMFMDMAMLVESQGEMIDRIEYN |
3 | 6y5q8 | 0.17 | 0.15 | 5.08 | 0.34 | FFAS-3D | | -------TVAELKQLVARPDVDPKLLVHLKATRNSVPVPRH--WCFKRKYLQGKRGIEKPPFELPDFIKRDIDYQKLHDAFFKWQT---KPKLTIHGDLYYEGKEFEDELRISLGMPVGPNAHKVPPPPPPSYPNLKIP--GLNSPIPPLYGDV- |
4 | 6ahfC1 | 0.10 | 0.08 | 3.12 | 0.97 | SPARKS-K | | HPQLQPIHI--LAAFIETPEDG--SVPYLQNLIEKGRYDYDLFKKVVNRRIPQQQPAPAEITPSYALLQDAAKIQKQQKDSFIAQDHILFALFNDSSIQQIFKEAQVDIEAIKQQALELRGNTRIDSRGADTNTPLE------------------ |
5 | 6g7eB | 0.18 | 0.04 | 1.26 | 0.63 | CNFpred | | -----------------HPALHPFVMQQVPLVIKALRSDLSVFRYMAAKCM-------------------------------------------------------------------------------------------------------- |
6 | 2ragA | 0.06 | 0.05 | 2.01 | 0.83 | DEthreader | | ---LTLDTHLDPVVYIGARYALHRTIEIREMLAN-DTFEMALTSDAR------------AFVS--ETFYGLRMAGPALVQSVSAPIIASHSGHPRN--------------D-MKTATPEAVKAYADAADKPAARGDFYMITIWSVLVDAQAAKSV |
7 | 2v45A2 | 0.04 | 0.04 | 1.95 | 0.84 | MapAlign | | ATCFFIIGSNTSEAHGTDLAFMHSMAWVIINEELDARAFAESAATMSLWCMGINQRVQGANNLIHNLHLITGQICRPGATSFSLSLRYVRGQDPCVPADHPDRFFFYGKPDGRAVIWMRPAKGAAEEPDAEYPLYLTSMR--------------- |
8 | 1jvrA | 0.15 | 0.13 | 4.36 | 0.74 | MUSTER | | HMGQIHGLSPTPIPKAPRGLSTHHWLNFLQAAYRLQPGPSDFDFQQLRRFLKLALKTP-IWLNPIDYSLLASLIPKGYPGRV----VEIINILVKNQVSPSAPAAPVPTPICPTTTP---------PPPPPPSPEAHVPP-----PYVEPTTTQC |
9 | 2pffB | 0.18 | 0.17 | 5.69 | 0.82 | HHsearch | | QGLNILEWLENPSNTLKGATGHSQGLVTAVAITDSWESFFVSVRKAITEAYP-NTSLPPSILEDSLENNEGVPSPMISNLTQE-QVQKTNSHLPAGKQVEISGNLPPQSNLTLRRIPFSESNRFLPVASPFHSHLLVPASDLINIQIPVYDTFDG |
10 | 5yzvA1 | 0.06 | 0.05 | 2.30 | 0.49 | CEthreader | | TDREAVAVAFSPGGSLLAGGSGDKLIHVWDVASGDELHTLEGHTDWVRAVAFSPDGALLASGSDDATVRLWDVRAVFEGHTHYVLDIAFSPDGSMVASGTARLWNVATGTEHAVLKSVAFHPEGTTLASASEDGTIRIWP--------------- |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Download alignment lists the threading program used to identify the template, and provide the 3D structure of aligned regions of threading templates (threading[1-10].pdb.gz). |
(f) | Template residues identical to query sequence are highlighted in color. |
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