Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Downloadalignment | | 20 40 60 80 100 120 140
| | | | | | | |
| SS Seq | CHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHC TAYVTAALLEMGKDVDDPMVSQGLRCLKNSATSTTNLYTQALLAYIFSLAGEMDIRNILLKQLDQQAIISGESIYWSQKPTPSSNASPWSEPAAVDVELTAYALLAQLTKPSLTQKEIAKATSIVAWLAKQHNAYGGFSSTQDTVVALQALAKYATTAY |
1 | 4acqA2 | 0.44 | 0.43 | 12.70 | 1.33 | DEthreader | | SAYITIALLEIPLTVTHPVVRNALFCLESAWKTASHVYTKALLAYAFALAGNQDKRKEVLKSLNEEAVKKDNSVHWERPQ-KPKAPHFEP-APSAEVEMTSYVLLAYLTAPAPTSEDLTSATNIVKWITKQQNAQGGFSSTQDTVVALHALSKYGAATF |
2 | 4acqA | 0.43 | 0.43 | 12.72 | 1.63 | SPARKS-K | | SAYITIALLEIPLTVTHPVVRNALFCLESAWDHGSHVYTKALLAYAFALAGNQDKRKEVLKSLNEEAVKKDNSVHWERPQKPKAGHFYEPQAPSAEVEMTSYVLLAYLTAQPPTSEDLTSATNIVKWITKQQNAQGGFSSTQDTVVALHALSKYGAATF |
3 | 4c1sA | 0.08 | 0.08 | 3.01 | 0.71 | MapAlign | | NVWIGLDMVDKEMRY-LTQAKVVWRYLIDGWGGVKHSCSTGPTAVMGCKMYYLDWAIKCYDYMLDLQD--KSDHLFYDNVRPNKDDPNLPGEKNKYSYNSGQPLQAACLLITGEQKYLDEAYAIAESCHKWFMTFNILAHAWFNTIMCRGFFELYSID- |
4 | 4fxgB | 0.32 | 0.31 | 9.30 | 0.54 | CEthreader | | TAFVTIALHHGLAVFQEASISKANSFLGEKASAGLGAHAAAITAYALSLTKAVDLLGVAHNNLMAMAQETGDNLYWGSVTGSQNPSDPMPQAPALWIETTAYALLHLLLHEGKA----EMADQASAWLTRQGSFQGGFRSTQDTVIALDALSAYWIASH |
5 | 4acqA2 | 0.43 | 0.43 | 12.72 | 1.29 | MUSTER | | SAYITIALLEIPLTVTHPVVRNALFCLESAWKHGSHVYTKALLAYAFALAGNQDKRKEVLKSLNEEAVKKDNSVHWERPQKPPVGHFYEPQAPSAEVEMTSYVLLAYLTAQPPTSEDLTSATNIVKWITKQQNAQGGFSSTQDTVVALHALSKYGAATF |
6 | 3cu7A | 0.26 | 0.25 | 7.58 | 2.13 | HHsearch | | TAFTVIGIRKAFDICPDTALIKADNFLLENTLPAQSTFTLAISAYALSLGDKHPQFRSIVSALKREALVKGNYRFWKDNLQHK--DSSVPNGTARMVETTAYALLTSLNLKD-----INYVNPVIKWLSEEQRYGGGFYSTQDTINAIEGLTEYSLLVK |
7 | 2b39A1 | 0.29 | 0.25 | 7.65 | 1.92 | FFAS-3D | | TAFVLIALHEAKDICEARSIAKAGDFLENHYRELRRPYTVAIAAYALALLGKLEGDRLTKFLNT----------------AKEKNRWEEPNQKLYNVEATSYALLALLARKDYDT-----TPPVVRWLNEQRYYGGGYGSTQATFMVFQALAQYQKDV- |
8 | 4acqA2 | 0.43 | 0.43 | 12.72 | 0.98 | EigenThreader | | SAYITIALLEIPLTVTHPVVRNALFCLESAWKTAQHVYTKALLAYAFALAGNQDKRKEVLKSLNEEAVKKDNSVHWERPQKPPVGHFYEPQAPSAEVEMTSYVLLAYLTAQPPTSEDLTSATNIVKWITKQQNAQGGFSSTQDTVVALHALSKYGAATF |
9 | 4acqA | 0.44 | 0.43 | 12.71 | 1.29 | CNFpred | | SAYITIALLEIPLTVTHPVVRNALFCLESAWK-GSHVYTKALLAYAFALAGNQDKRKEVLKSLNEEAVKKDNSVHWERPQKPKAPHFYEPQAPSAEVEMTSYVLLAYLTAQAPTSEDLTSATNIVKWITKQQNAQGGFSSTQDTVVALHALSKYGAATF |
10 | 4acqA | 0.44 | 0.43 | 12.70 | 1.33 | DEthreader | | SAYITIALLEIPLTVTHPVVRNALFCLESAWKTASHVYTKALLAYAFALAGNQDKRKEVLKSLNEEAVKKDNSVHWERPQ-KPKAPHFEP-APSAEVEMTSYVLLAYLTAPAPTSEDLTSATNIVKWITKQQNAQGGFSSTQDTVVALHALSKYGAATF |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Download alignment lists the threading program used to identify the template, and provide the 3D structure of aligned regions of threading templates (threading[1-10].pdb.gz). |
(f) | Template residues identical to query sequence are highlighted in color. |
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