Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Downloadalignment | | 20 40 60 80 100 120 140 160 180 200 220 240 260 280 300 320
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| SS Seq | CSSSSSCCCSSSSCCCSSSSSSSSSSCCCCCSSSSSSSSSSSCCCCCCCCCCCCCCCCCHHHSSSSSSCCCSSSSSSSSHHHHHHCCCCCCCSSSSSSSSSSCCCCSSSSSSSSSSSSSSCSSSSSSCCCCCSCCCCSSSSSSSSSCCCCCCCCCCSSSSSSSSCCCSSSSSSSSCCCCSSSSSSCCCCCCCCSSSSSSSSCCCCCCCCCCCCCCCCCCSSSSSSSSSCCCCCSSSSSSCCCCCCCCCSSSSSSSSCCCCCCSSSSSSSSSSSSCCCCCSSSSSSSSSSSSSSCCSSSSCCCCCCCCCSSSSSSSCCCCCCCCCCCCC FKVEVVEPKELSTVQESFLVKICCRYTYGKPMLGAVQVSVCQKANTYWYREVEREQLPDKCRNLSGQTDKTGCFSAPVDMATFDLIGYAYSHQINIVATVVEEGTGVEANATQNIYISPQMGSMTFEDTSNFYHPNFPFSGKIRVRGHDDSFLKNHLVFLVIYGTNGTFNQTLVTDNNGLAPFTLETSGWNGTDVSLEGKFQMEDLVYNPEQVPRYYQNAYLHLRPFYSTTRSFLVAEYDQCPVSGPWDFPQPLIDPMPQGHSSQRSIIWRPSFSEGTDLFSFFRDVGLKILSNAKIKKPVDCSHRSPEYSTAMGAGGGHPEAFESST |
1 | 4acqA | 0.20 | 0.18 | 5.85 | 1.33 | DEthreader | | FEVQVTVPKIITILEEEMNVSVCGLYTYGKPVPGHVTVSICRKYSDA---SDCHGDSQAFCEKFSGQLNSHGCFYQQVKTKVFQLKRK--EYEMKLHTEAQIQEETVVELTGRSSEITRTITKLSFVKVDSHFRQGIPFFGQVRLVDGKGVPIPNKVIFIRGNE--ANYYSNATTDEHGLVQFSINTT-NV-MGTSLTVRVNY-KDR-----VSEEHEEAHHTAYLVFS-PSKSFVHHYFYYLIMAKGIVRTGTHGLLVMKGHFSISIPVKSDIAPVARLLIYAVLTGDVIGDSAKYDVENCLANKVAAPS------------IS--A |
2 | 2pn5A1 | 0.14 | 0.13 | 4.39 | 2.03 | SPARKS-K | | FDVQVMPSVIPLEEHQAVNLTIEANYHFGKPVQGVAKVELYLD---------------DDKLKLKKELTVYGKGQVELRFDNFAMDAD--QQDVPVKVSFVEQYTNRTVVKQSQITVYRYAYRVELIKESPQFRPGLPFKCALQFTHHDGTPAKGISGKVEVSDVR--FETTTTSDNDGLIKLELQPSE-GTEQLSIHFNA-VDGFFFYEDNKVETVTDAYIKLELIKRNKLMRFMVTFFVYYVMSKGNIIDAGFMRPNKQPKYLLQLNATEKMIPRAKILIATVAGRTVVYDFADLAFQELRNNFDLSIDEQEIKPGRQIELSMSGR |
3 | 3cu7A | 0.14 | 0.13 | 4.47 | 1.03 | MapAlign | | FSVSIEPENFIGYNFKNFEITIKARYFYNKVVEADVYITFGIREDL--------KDDQKEMMAMNTMLIN-GIAQVTFDSELSYYSLEDNNKYLYIAVTVIESTGGFSEEAEIGIKYVLSPYKLNLVATPLFLKPGIPYPIKVQVKDSLDQLVGGVPVTLNAQTIDSDLPSKSVTRVDGVASFVLNLPSGV-TVLEFNVKTDAPDL------PEENQAREGYRAIAYSSLSQSYLYDKITHYNYLILSKIHFGTREKFSDASYQSINIPVTQNMSSRLLVYYIVTGEQTAELVSDSVWLNIEEKCGNQLQVHLSPDADAY-------- |
4 | 3cu7A | 0.13 | 0.13 | 4.52 | 0.69 | CEthreader | | FSVSIEPEYNFIGYKKNFEITIKARYFYNKVVEADVYITFGIREDLKDDQKEMMQTAMQNTMLINGIAQVTFDSETAVKELSYYSLEDLNNKYLYIAVTVIESTGGFSEEAEIGIKYVLSPYKLNLVATPLFLKPGIPYPIKVQVKDSLDQLVGGVPVTLNAQTSDLDPSKSVTRVDDGVASFVLNLPSGV-TVLEFNVKTDAPDLP------EENQAREGYRAIAYSSLSQSYLYIDWYNYLILSKGKIIHFGTREKFSDSYQSINIPVTQNMVPSSRLLVYYIVTAELVSDSVWLNIEEKCGQVHLSPDADAYSPGQTVSLNMATG |
5 | 4acqA | 0.22 | 0.21 | 6.75 | 1.54 | MUSTER | | FEVQVTVPKIITILEEEMNVSVCGLYTYGKPVPGHVTVSICRKYSDASDC--HGEDSQAFCEKFSGQLNSHGCFYQQVKTKVFQLKRKEYEMKLHTEAQIQEEGTVVELTGRQSSEITRTITKLSFVKVDSHFRQGIPFFGQVRLVDGKGVPIPNKVIFIRGNEAN--YYSNATTDEHGLVQFSINTTNVMGTSLTVRVNYKDRSPCYGYQWVSEEHEEAHHTAYLVFSPSKHYIKKLSFYYLIMAKGGIVRTGTHGLLMKGHFSISIPVKSDIAPVARLLIYAVPTGDVIGDSAKYDVECLANKVDLSFSPSQSLPASHHLRVTAAP |
6 | 6ysqA3 | 0.15 | 0.14 | 4.80 | 3.21 | HHsearch | | FEVKITPGKYILTVPGHLDLDIQARYIYGKPVQGVAYVRFGLLDEDGKKTF-----FRGL---ESQTKLVNGQSHISLSKAEFQDATDLQGLRLYVAAAIIESPGGEMEEAELSWYFVSSPFSLDLSKTKRHLVPGAPFLLQALVREMSGSPASGIPVKVSATVPGSVQDIQQNTDGSGQVSIPIIIPQTI-SELQLSVSAGSPHPA-----------IARLTVAAPPSGGPGFLSISHYYYMILSRGQIVFMNREPKR-T-LTSVSVFVDHHLAPSFYFVAFYYHDHPVANSLRVDVQAACEGKLELSVDAKQYRNGESVKL-HLET |
7 | 4acqA4 | 0.27 | 0.18 | 5.61 | 1.80 | FFAS-3D | | FEVQVTVPKIITILEEEMNVSVCGLYTYGKPVPGHVTVSICRKYSDA--SDCHGEDSQAFCEKFSGQLNSHGCFYQQVKTKVFQLKRKEYEMKLHTEAQIQEEGTVVELTGRQSSEITRTITKLSFVKVDSHFRQGIPFFGQVRLVDGKGVPIPNKVIFIRGNEANYY--SNATTDEHGLVQFSINTTNVMGTSLTVRVNYKDRSPCYGYQWVSEEHEEAHHTAY------------------------------------------------------------------------------------------------------- |
8 | 2pn5A1 | 0.10 | 0.08 | 3.05 | 1.07 | EigenThreader | | TFQVMPSVIP-LEEHQAVNLTIEANYHFGKPVQGVAKVELYLDD------------DKLKLKKELTVG----KGQVELRF----DNFAMDADQQDVPVKVSFVENRTVVKQSQITVYRYAY-RVELIKESPQFRPGLPFKCALQFTHHDGTPAKGISGKVEVS-DVRFETTTTS--DNDGLIKLELQPSEGTEQLSIHFNA-------VDG-------FFYEDVNKVETVTDMVTCTERMTVYYVMSKGNIIDAGFMRPNK-QYLLQLNATEKM-IPRAKILIATGR--TVYDFADLAFQ-------------ELRNNFDLSIDEQEI |
9 | 4d93A | 0.13 | 0.12 | 4.23 | 3.86 | CNFpred | | FDVQVMPSVIPLEEHQAVNLTIEANYHFGKPVQGVAKVELYLDD---------------DKLNQKKELTVYGKGQVELRFDNFAMD--ADQQDVRVKVSFIEQYTNRTVVKQSQITVYRYAYRVELIKESPQFRPGLPFKCALQFTHHDGTPAKGITGKVEVSD--VGFETTTTSDNDGLIKLELQPSE-GTEQLGINFNAVDGFFFYEDVNKVETVTDAYIKLELKSPIKLMRFMVT-FVYYVMSKGNIIDAGFMRPNKQTKYLLQLNATEKMIPKAKILIATVAGRTVVYDYADLDFQELRNNFDLSIDEQEIKPGRQI-ELSMSG |
10 | 6ysqA3 | 0.13 | 0.12 | 4.11 | 1.17 | DEthreader | | FEVKITPKPYILTHLDEMQLDIQARYIYGKPVQGVAYVRFGLL-D--ED---G-KKTFFRGLESQTKLV-NGQSHISLSKAEFQGITDLQGLRLYVAAAIIESPGGEMEEAELTWYFVSSPFSLDLSKTKRHLVPGAPFLLQALVREMSPASGIPVKVSATVSSPGVPEVQDIQQNTDGVSIPIIIPQTI---SELQLSVSAGSP---------HPAIARLTVAAP-PSGGPGFLSILHYYYMILSRGQIVFMNREPKRTLTSVSVFVDHH--LAPSFYFVAFYYHGDHPVANSLRVDVGKVFAGLSLSKTKG---------CVATPV |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Download alignment lists the threading program used to identify the template, and provide the 3D structure of aligned regions of threading templates (threading[1-10].pdb.gz). |
(f) | Template residues identical to query sequence are highlighted in color. |
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