Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Downloadalignment | | 20 40 60 80 100 120 140 160
| | | | | | | | |
| SS Seq | CCSCCCCCCCCCCCCCHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC MQEVIAGLERFTFAFEKDVEMQKGTGLLPFQGMDKSASAVCNFFTKGLCEKGKLCPFRHDRGEKMVVCKHWLRGLCKKGDHCKFLHQYDLTRMPECYFYSKFGDCSNKECSFLHVKPAFKSQDCPWYDQGFCKDGPLCKYRHVPRIMCLNYLVGFCPEGPKCQFAQKIREFKLLPGSKI |
1 | 3gtgA | 0.04 | 0.03 | 1.80 | 0.83 | DEthreader | | DRNLKTCQEECPGP-RNLGKRVDFSLFNQPSLH-K--MSMMLNLSVT-PLSQLCAV-QISKPCMGIVLCGIR-KLTGLSVAIP-VEKKT----FSTGGDT-IADNLKDLNNVKQIAMSACVGQQSVEGKRIAYSPEGFVEFFAASKVTSGPRLKEILNV------MKTPSDGVNLSDIE |
2 | 6bllC | 0.67 | 0.44 | 12.41 | 3.79 | SPARKS-K | | MQEIIASVDHIKFDLEIAVEQQLGAQPLPFPGMDKSGAAVCEFFLKAACGKGGMCPFRHISGEKTVVCKHWLRGLCKKGDQCEFLHEYDMTKMPECYFYSKFGECSNKECPFLHID--------------------------------------------------------------- |
3 | 3rmjA | 0.07 | 0.06 | 2.56 | 0.66 | MapAlign | | ---GAAMTKEEKIRVARQLEKLGVDIIEAGFATITKSTVCSLSRAIERDIAGEAVKKRIH--TFIATSPIHMEYKLKMKPKQVCEDASEIDFLACGAVIEAGATINIFFRELKTPNGGKVVWSAHCNDLGLAVNSLAALARQV--ECT--VN---GLGERAG-NASVEEIVMAL----- |
4 | 5elhA | 0.15 | 0.11 | 3.58 | 0.64 | CEthreader | | --------------------------PQHYTYLKEFRTEQCPLFVQHKCTQHRPCFHWHFVNQRRRRSIRRRDGTFNY-----------SPDVYCTKYDEATGLCPEDECPFLHRTTGDTERRY--------------HLRYYKTGICIHETDSKTKNGLHCAFAHGPHDLRSPVYDIR |
5 | 6bllC | 0.67 | 0.44 | 12.41 | 2.38 | MUSTER | | MQEIIASVDHIKFDLEIAVEQQLGAQPLPFPGMDKSGAAVCEFFLKAACGKGGMCPFRHISGEKTVVCKHWLRGLCKKGDQCEFLHEYDMTKMPECYFYSKFGECSNKECPFLHID--------------------------------------------------------------- |
6 | 6bllC | 0.67 | 0.44 | 12.41 | 2.82 | HHsearch | | MQEIIASVDHIKFDLEIAVEQQLGAQPLPFPGMDKSGAAVCEFFLKAACGKGGMCPFRHISGEKTVVCKHWLRGLCKKGDQCEFLHEYDMTKMPECYFYSKFGECSNKECPFLHID--------------------------------------------------------------- |
7 | 6bllC | 0.57 | 0.36 | 10.45 | 1.23 | FFAS-3D | | MQEIIASVDHIKFDLEIAVEQQLGAQPLPFPGMDKSGAAVCEFFLKAACGKGGMCPFRHISGEKTVVCKHWLRGLCKKGDQCEFLHEYDMTKMPE----------------------------------------------------CYFYSKFGECSNKECPFLHI------------ |
8 | 6xlrA | 0.05 | 0.05 | 2.30 | 0.57 | EigenThreader | | ASAPIGSAIPRNNW----AVTCDSAQSGNEDGTNWGSPVASGSWFADSTEANGQPWTIDLPIVPAWSSYRNDAFEGSPGGTKHDMFCPNDAKKPDMQVAR---GQSDGRVFTGSWSGNAKVNPMLT---ADKQGLYRSDNHAPDAMCGGGSPSDATTNLYFARTFHGQRRGIPFEDSTP |
9 | 6bllC | 0.68 | 0.44 | 12.41 | 5.86 | CNFpred | | MQEIIASVDHIKFDLEIAVEQQLGAQPLPFPGMDKSGAAVCEFFLKAACGKGGMCPFRHISGEKTVVCKHWLRGLCKKGDQCEFLHEYDMTKMPECYFYSKFGECSNKECPFLHI---------------------------------------------------------------- |
10 | 3s4wA | 0.07 | 0.06 | 2.35 | 0.83 | DEthreader | | QMILTFVVSSVLDLFSIALLVVGLEFGFLMSYGPKKILD-VLNRV-VTR--T----SSPILPLQTVQLLI-LRKAMFASQLDARKSDIMYDGFYDVL-RRNSQLASSIMQTLCICWYRKPDKQNLCDITRVL-----------EGLQKT-F----S-V-LQFYFLIFQLKEALLDASCK |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Download alignment lists the threading program used to identify the template, and provide the 3D structure of aligned regions of threading templates (threading[1-10].pdb.gz). |
(f) | Template residues identical to query sequence are highlighted in color. |
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