Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Downloadalignment | | 20 40 60 80 100 120 140 160 180
| | | | | | | | | |
| SS Seq | CCCCCCCCCCCCCHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCSSSSSSSSSSSCCCCCSSSSSSSCSSSSCCSCCCCCCCCCCCCCCCCCCCCCSSSSSSSCCCCCCCCCCCSSSSSSCSCSCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC MSTFPVLAEDIPLRERHVKGRVDPHFRAPKMEMFQRLLLLLLLSMGGTWASKEPLRPRCRPINATLAVEKEGCPVCITVNTTICAGYCPTMTRVLQGVLPALPQVVCNYRDVRFESIRLPGCPRGVNPVVSYAVALSCQCALCRRSTTDCGGPKDHPLTCDDPRFQDSSSSKAPPPSLPSPSRLPGP |
1 | 6r3qA | 0.09 | 0.06 | 2.47 | 0.83 | DEthreader | | QLRALHLCIHAIGIHLFIMSQVRSRSTFLKVGQSIMHGKDLEVEKALKERMIHSPR-LFA-I-FMSANK------SAHALLLLFCYYCVAGCPE-----PRAHCCMGLMIRIECQ-K-------------KEMVNM-RV--GVHTLMEQVIATKYLDDRYEMEDLIA--GQ---------------- |
2 | 1hcnB | 1.00 | 0.59 | 16.47 | 3.59 | SPARKS-K | | ---------------------------------------------------KEPLRPRCRPINATLAVEKEGCPVCITVNTTICAGYCPTMTRVLQGVLPALPQVVCNYRDVRFESIRLPGCPRGVNPVVSYAVALSCQCALCRRSTTDCGGPKDHPLTCD-------------------------- |
3 | 5aejA | 0.13 | 0.07 | 2.59 | 0.84 | MapAlign | | -----------------------------------LESSQEALHVTERKYL---KRDWCKTQPLKQTIHEEGC-NSRTIINRFCYGQCNSFYIPRHIEGSFQSCSFCKPKKFTTMMVTLNCPLQPPTKKKRVTRVKQCRCISIDL------------------------------------------ |
4 | 1hcnB | 1.00 | 0.59 | 16.47 | 0.85 | CEthreader | | ---------------------------------------------------KEPLRPRCRPINATLAVEKEGCPVCITVNTTICAGYCPTMTRVLQGVLPALPQVVCNYRDVRFESIRLPGCPRGVNPVVSYAVALSCQCALCRRSTTDCGGPKDHPLTCD-------------------------- |
5 | 1hcnB | 1.00 | 0.59 | 16.47 | 1.94 | MUSTER | | ---------------------------------------------------KEPLRPRCRPINATLAVEKEGCPVCITVNTTICAGYCPTMTRVLQGVLPALPQVVCNYRDVRFESIRLPGCPRGVNPVVSYAVALSCQCALCRRSTTDCGGPKDHPLTCD-------------------------- |
6 | 1fl7B | 0.35 | 0.20 | 5.91 | 5.83 | HHsearch | | ----------------------------------------------------------CELTNITIAIEKEECRFCISINTAWCAGYCYTRDLVYKDPARPKIQKTCTFKELVYETVRVPGCAHHADSLYTYPVATQCHCGKCDSDSTDCTVRGLGPSYCSFGEM---------------------- |
7 | 1hcnB | 1.00 | 0.59 | 16.47 | 1.34 | FFAS-3D | | ---------------------------------------------------KEPLRPRCRPINATLAVEKEGCPVCITVNTTICAGYCPTMTRVLQGVLPALPQVVCNYRDVRFESIRLPGCPRGVNPVVSYAVALSCQCALCRRSTTDCGGPKDHPLTCD-------------------------- |
8 | 2k8pA | 0.14 | 0.12 | 4.18 | 1.00 | EigenThreader | | PEPPPELENNKTMNRAENGGRPPHHPFE----------------------TKDVSEYSCRELHFTRYVTD---GPCRSATELVCSGQCGPARLLPNAIGPSGPDFRCIPDRYRAQRVQLLCPGGEAPRARKVRLVASCKCKRLTRFHNQSELKDFGTEAARPQKGRKPRPRARSAKANQAELENAY- |
9 | 1hcnB | 1.00 | 0.59 | 16.47 | 2.26 | CNFpred | | ---------------------------------------------------KEPLRPRCRPINATLAVEKEGCPVCITVNTTICAGYCPTMTRVLQGVLPALPQVVCNYRDVRFESIRLPGCPRGVNPVVSYAVALSCQCALCRRSTTDCGGPKDHPLTCD-------------------------- |
10 | 4c2mA | 0.07 | 0.05 | 2.16 | 0.83 | DEthreader | | -------DKVSLEDRRVIFSRLMNAFVTIQNDVNAFIDGVKQALEGLFRKHMGKRV--AAFLTYPEPVTAYLTPSNKKVYRHIDVVLMNRPTLH-------ASMMGHKVRVLP-----------------------TLRLHANGA-NANTQVRGLIQGAKLSVLGRLT--T------HKTKQ----- |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Download alignment lists the threading program used to identify the template, and provide the 3D structure of aligned regions of threading templates (threading[1-10].pdb.gz). |
(f) | Template residues identical to query sequence are highlighted in color. |
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