>A6NKF7 (163 residues) MSEQGRETEEEEGGGGASDTAPMLPRGPPDHQASALTCPGWSGPPLLPGRLLAGLLLHLL LPAAAFLLVLLPAAAVVYLGFLCHSRVHPAPGPRCRALFSDRGSAALIVFGLLSLPPLLV LASAVRARLARRLRPLLPPPAGTPGPRRPPGRPDEDEQLCAWV |
Sequence |
20 40 60 80 100 120 140 160 | | | | | | | | MSEQGRETEEEEGGGGASDTAPMLPRGPPDHQASALTCPGWSGPPLLPGRLLAGLLLHLLLPAAAFLLVLLPAAAVVYLGFLCHSRVHPAPGPRCRALFSDRGSAALIVFGLLSLPPLLVLASAVRARLARRLRPLLPPPAGTPGPRRPPGRPDEDEQLCAWV |
Prediction | CCCCCCCCHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCSCCCCCCCCHHHSCCCCCSSHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC |
Confidence | 9621223256526887556788789999644334566663023455778999999999999999999999999999998553103111589986021031798221257888876589999999999987751025899777777789999857767721139 |
H:Helix; S:Strand; C:Coil | |
Sequence |
20 40 60 80 100 120 140 160 | | | | | | | | MSEQGRETEEEEGGGGASDTAPMLPRGPPDHQASALTCPGWSGPPLLPGRLLAGLLLHLLLPAAAFLLVLLPAAAVVYLGFLCHSRVHPAPGPRCRALFSDRGSAALIVFGLLSLPPLLVLASAVRARLARRLRPLLPPPAGTPGPRRPPGRPDEDEQLCAWV |
Prediction | 8576646445765444444333333533344456514132132000121420110322333333233303331331130111021323526344034204452100010223343331311121333300420441203322342264254444565310215 |
Values range from 0 (buried residue) to 8 (highly exposed residue) | |
Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Downloadalignment | 20 40 60 80 100 120 140 160 | | | | | | | | | |||||||||||||
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SS Seq | CCCCCCCCHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCSCCCCCCCCHHHSCCCCCSSHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC MSEQGRETEEEEGGGGASDTAPMLPRGPPDHQASALTCPGWSGPPLLPGRLLAGLLLHLLLPAAAFLLVLLPAAAVVYLGFLCHSRVHPAPGPRCRALFSDRGSAALIVFGLLSLPPLLVLASAVRARLARRLRPLLPPPAGTPGPRRPPGRPDEDEQLCAWV | |||||||||||||||||||
1 | 6ykmA | 0.05 | 0.05 | 2.33 | 0.64 | CEthreader | KGSGVNLPERIAQLIEFAINEIENEFLKNAMMMLVDGKSFEEIHESMEIQTEQLEEHYKECAEYWIVFGETCPTMGLVGAVFGLILALKLLDNPQAMAAGISGAFTATVTGIFGAYAFAPWGKKLKANGMDLVKEQIVITEAIKGIAEGANPRDLEAKLFNFL | |||||||||||||
2 | 6ykmA | 0.05 | 0.05 | 2.33 | 0.60 | EigenThreader | GVNLPERIAQLIEFAIIARRDGLLALESRTNEIEMMMLVDGKSFEEIHESMEIQTEQLEEHYKECAEYWIVFGETCPTMGLVGAVFGLILALKLLGISGAFTATVTGIFGAYALFAPWGKKLKANGMDLVKEQIVITEAIKGIAEGANPRDLEAKLFNFLSHD | |||||||||||||
3 | 5z1fA | 0.15 | 0.12 | 4.14 | 0.53 | FFAS-3D | ---------------------------CKTEAEVKEAWYPGDLSYATRVPGDMLILTITFCYSVIAPLILIFGITYFGLGWLVYVPSYESYGRMWPHIHQ-RILAALFLFQVVMVIPLIITSLIFGYVCRQKFYGGFEHTALEVACRELKQSPDLEEIFRAYI | |||||||||||||
4 | 6y5rA1 | 0.08 | 0.08 | 3.15 | 0.77 | SPARKS-K | PKGEIIEKPSAKSSDVLGSLNHEYVLVDITTSFTLLSVTGIMAGSNRAQKSIPIGTILAILTTSFVYLSNVVLFGACIGVVLRDKFGDAVKGNLVVGTLSWPSPWVIVIGSFFSTCGAGLQSLTGAPRLLQAIAKIIPFLRVFGHSKANGEPTWALLLTAAIA | |||||||||||||
5 | 3rkoB | 0.10 | 0.06 | 2.05 | 0.83 | CNFpred | -----------------------------------------HAATMVTAGVYLIARTHGLFLMTVLHLVGIVGAVTLLLAGFAALVQ-----TDIKRVLAYSSQIGYMFLALGVQAWDAAIFHLMTHAFFKALLFLA-------------------------- | |||||||||||||
6 | 3i9wA2 | 0.06 | 0.04 | 1.83 | 1.00 | DEthreader | -----------------------------------SRSLRQGELVGQRLQLRQQQQQLSQQIVAAADEIARLAQGQANNATTSAGATQAGIESALDRLID-IDLEYVQIEDVRAQVATTLTTVSQ-YSDLLALYQQDSSHLQTLAQ----------------- | |||||||||||||
7 | 2g87A | 0.08 | 0.08 | 3.12 | 0.84 | MapAlign | ------MNGTEGPNFYVPFSNKTGVVRSPFEAPQYYLAEPWQFSMLAAYMFLLIMLGFPINFLTPLNYILLNLAVADLFMVFGGFTTTSLHGYFVFGPTGCNLEGFFATLGGEIANHAIMGVAFTWVMALACWSRYIPEGMQCSCGIDYYTPHEETNNESFVI | |||||||||||||
8 | 2w53A2 | 0.09 | 0.07 | 2.79 | 0.45 | MUSTER | -----HLPFMQ-----------ELERTSTDQRDTPVH------DLRAVMIHSFIELSEDERLRKTMEIMLRSTEMQQAGFRDALDRMERADLGQLREGADPKIAARMLHATVLGVLHGAMVLKRDGMLALDMTLAAYVKDGVFVPGTVPEPLP---------- | |||||||||||||
9 | 6sp2A | 0.16 | 0.12 | 4.07 | 0.42 | HHsearch | LAENWIESAE-N-------------------------SRGYYYALAGVGINKFFISINLIFCLAISVISILSSLVTLYTVYLTWSAVANNPEKECNPGMFRVTFDTTNIIGLVVWL--LCILYNCI-------SSAVEGVTYSWSWYK----PHSEIEASMWV | |||||||||||||
10 | 6ysfE | 0.08 | 0.08 | 3.15 | 0.61 | CEthreader | GMSNIDVIQNFVDLSRKARREGLLSLEDAINNLTDDYMKKGLRMVVDGIEPETIREIMELEIDEMEKRHKSGADMLKTWGGYAPAFGMVGKALITTFYGSLMANAVFNPMGANLMFKSGVEATTREMVLEGVLAIQSGVNPRIMEEKLVSYLSPPERQAYSKV | |||||||||||||
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Top 10 structural analogs in PDB (as identified by
TM-align)
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Top 5 enzyme homologs in PDB
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Template proteins with similar binding site:
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References: | |
1. | Wei Zheng, Chengxin Zhang, Yang Li, Robin Pearce, Eric W. Bell, Yang Zhang. Folding non-homology proteins by coupling deep-learning contact maps with I-TASSER assembly simulations. In preparation, 2020. |