>A6NIZ1 (184 residues) MREYKLVVLGSRGVGKSALTVQFVQGIFVEKYDPTIEDSYREQVEVDAQQCMLEILDTAG TEQFTAMRDLYMKNGQGFALVYSITAQSTFNDLQDLREQILRVKDTDDVPMILVGNKCDL EDERVVGKEQGQNLARQWNNCAFLESSAKSKINVNEIFYDLVRQINRKTPVPGKARKKSS CQLL |
Sequence |
20 40 60 80 100 120 140 160 180 | | | | | | | | | MREYKLVVLGSRGVGKSALTVQFVQGIFVEKYDPTIEDSYREQVEVDAQQCMLEILDTAGTEQFTAMRDLYMKNGQGFALVYSITAQSTFNDLQDLREQILRVKDTDDVPMILVGNKCDLEDERVVGKEQGQNLARQWNNCAFLESSAKSKINVNEIFYDLVRQINRKTPVPGKARKKSSCQLL |
Prediction | CCSSSSSSSCCCCCCHHHHHHHHHHCCCCCCCCCCCCSSSSSSSSSCCSSSSSSSSSCCCCCHHHHHHHHHHHCCCSSSSSSSCCCHHHHHHHHHHHHHHHHHHCCCCCCSSSSSSCCCCCCCCCCCHHHHHHHHHHHCCCCSSSCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCSSC |
Confidence | 9658999996999858898878763844687799765566799999999999999848995156767898761397899999789978999999999999998189997099996577781116729999999999618991798246889898999999999999855788776789874669 |
H:Helix; S:Strand; C:Coil | |
Sequence |
20 40 60 80 100 120 140 160 180 | | | | | | | | | MREYKLVVLGSRGVGKSALTVQFVQGIFVEKYDPTIEDSYREQVEVDAQQCMLEILDTAGTEQFTAMRDLYMKNGQGFALVYSITAQSTFNDLQDLREQILRVKDTDDVPMILVGNKCDLEDERVVGKEQGQNLARQWNNCAFLESSAKSKINVNEIFYDLVRQINRKTPVPGKARKKSSCQLL |
Prediction | 6551100001122021100020004541376240101341333041564502000001033331431363214301000000002356006404501530371364740000000011116763514473045107614703000000256430440033005304744756777765440305 |
Values range from 0 (buried residue) to 8 (highly exposed residue) | |
Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Downloadalignment | 20 40 60 80 100 120 140 160 180 | | | | | | | | | | |||||||||||||
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SS Seq | CCSSSSSSSCCCCCCHHHHHHHHHHCCCCCCCCCCCCSSSSSSSSSCCSSSSSSSSSCCCCCHHHHHHHHHHHCCCSSSSSSSCCCHHHHHHHHHHHHHHHHHHCCCCCCSSSSSSCCCCCCCCCCCHHHHHHHHHHHCCCCSSSCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCSSC MREYKLVVLGSRGVGKSALTVQFVQGIFVEKYDPTIEDSYREQVEVDAQQCMLEILDTAGTEQFTAMRDLYMKNGQGFALVYSITAQSTFNDLQDLREQILRVKDTDDVPMILVGNKCDLEDERVVGKEQGQNLARQWNNCAFLESSAKSKINVNEIFYDLVRQINRKTPVPGKARKKSSCQLL | |||||||||||||||||||
1 | 2f9mA | 0.29 | 0.28 | 8.43 | 1.50 | DEthreader | DYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIVEFATRSIQVDGKTIKAQIWDTAGQEYRR-ITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADS-NIVIMLVGNKSDLRHLRAVPTDEARAFAEKNN-LSFIETSALDSTNVEEAFKNILTEIYRIVKQDRAAHD------- | |||||||||||||
2 | 1c1yA | 0.97 | 0.88 | 24.68 | 1.86 | SPARKS-K | MREYKLVVLGSGGVGKSALTVQFVQGIFVEKYDPTIEDSYRKQVEVDCQQCMLEILDTAGTEQFTAMRDLYMKNGQGFALVYSITAQSTFNDLQDLREQILRVKDTEDVPMILVGNKCDLEDERVVGKEQGQNLARQWCNCAFLESSAKSKINVNEIFYDLVRQINR----------------- | |||||||||||||
3 | 2f9mA | 0.29 | 0.26 | 7.95 | 0.55 | MapAlign | DYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTGVEFATRSIQVDGKTIKAQIWDTAGQERYRRITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHA-DSNIVIMLVGNKSDLRHLRAVPTDEARAFAEKN-NLSFIETSALDSTNVEEAFKNILTEIYRIV--------------- | |||||||||||||
4 | 2f9mA | 0.28 | 0.27 | 8.31 | 0.39 | CEthreader | DYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIVEFATRSIQVDGKTIKAQIWDTAGQERYRRITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHA-DSNIVIMLVGNKSDLRHLRAVPTDEARAFAEKN-NLSFIETSALDSTNVEEAFKNILTEIYRIVSQKQIADRAAHD--- | |||||||||||||
5 | 1c1yA | 0.97 | 0.88 | 24.68 | 1.82 | MUSTER | MREYKLVVLGSGGVGKSALTVQFVQGIFVEKYDPTIEDSYRKQVEVDCQQCMLEILDTAGTEQFTAMRDLYMKNGQGFALVYSITAQSTFNDLQDLREQILRVKDTEDVPMILVGNKCDLEDERVVGKEQGQNLARQWCNCAFLESSAKSKINVNEIFYDLVRQINR----------------- | |||||||||||||
6 | 2v55D | 0.29 | 0.26 | 7.95 | 0.91 | HHsearch | NVKCKIVVVGDSQCGKTALLHVFAKDCFPENYVPTVFENYTASFEIDTQRIELSLWDTSGSPYYDNVRPLSYPDSDAVLICFDISRPETLDSVKKWKGEIQEF--CPNTKMLLVGCKSDLRTDTPVSYDQGANMAKQIGAATYIECSALQSENVRDIFHVATLACVNK---------------- | |||||||||||||
7 | 1c1yA | 0.97 | 0.88 | 24.68 | 2.91 | FFAS-3D | MREYKLVVLGSGGVGKSALTVQFVQGIFVEKYDPTIEDSYRKQVEVDCQQCMLEILDTAGTEQFTAMRDLYMKNGQGFALVYSITAQSTFNDLQDLREQILRVKDTEDVPMILVGNKCDLEDERVVGKEQGQNLARQWCNCAFLESSAKSKINVNEIFYDLVRQINR----------------- | |||||||||||||
8 | 6jmgA | 0.25 | 0.24 | 7.60 | 0.65 | EigenThreader | ALRIKVISMGNAEVGKSCIIKRYCEKRFVPKYQATIGIDGVTKVHIKDREIKVNIFDMAGHPFFYEVRNEFYKDTQGVILVYDVGHKETFESLDGWLAEMKQELGIDNIVFAVCANKIDSTKHRSVDESEGRLWSES-KGFLYFETSAQSGEGINEMFQAFYSAIVDLCDNGGKRPVSAINIGF | |||||||||||||
9 | 4dxaA | 0.99 | 0.90 | 25.12 | 1.85 | CNFpred | MREYKLVVLGSVGVGKSALTVQFVQGIFVEKYDPTIEDSYRKQVEVDAQQCMLEILDTAGTEQFTAMRDLYMKNGQGFALVYSITAQSTFNDLQDLREQILRVKDTDDVPMILVGNKCDLEDERVVGKEQGQNLARQWNNCAFLESSAKSKINVNEIFYDLVRQINR----------------- | |||||||||||||
10 | 6s5fA | 0.32 | 0.30 | 9.01 | 1.50 | DEthreader | LYQFRLIVIGDSTVGKSCLIRRFTEGRFAQVSDPTVVDFFSRLVEIEPKRIKLQIWDTAGQERFRSITRAYYRNSVGGLLLFDITNRRSFQNVHEWLEETKVHVQPYQIVFVLVGHKCDLDTQRQVTRHEAEKLAAAYG-MKYIETSARDAINVEKAFTDLTRDIYELV-K------RGEI--- | |||||||||||||
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Top 10 structural analogs in PDB (as identified by
TM-align)
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Top 5 enzyme homologs in PDB
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Template proteins with similar binding site:
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References: | |
1. | Wei Zheng, Chengxin Zhang, Yang Li, Robin Pearce, Eric W. Bell, Yang Zhang. Folding non-homology proteins by coupling deep-learning contact maps with I-TASSER assembly simulations. In preparation, 2020. |