>A6NH13 (148 residues) MPGGDTTPEEAAAPSCAGYNPGLLLFRAQKAQGACVTSTEGAWPRRASALYGGRKMRCGE SGAGPDPRSNSAEVSSSQPALASKSQSKWGPTSNNPRGALTTTEFEMAGNRSQNIKHKQT ALIAIPMSSQTPRMLGRPRNQGQLYPQP |
Sequence |
20 40 60 80 100 120 140 | | | | | | | MPGGDTTPEEAAAPSCAGYNPGLLLFRAQKAQGACVTSTEGAWPRRASALYGGRKMRCGESGAGPDPRSNSAEVSSSQPALASKSQSKWGPTSNNPRGALTTTEFEMAGNRSQNIKHKQTALIAIPMSSQTPRMLGRPRNQGQLYPQP |
Prediction | CCCCCCCHHHCCCCCCCCCCCCSSSSSSCCCCCCSSSCCCCCCCCHHHHHHCCCCSCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCSSSSSSCCCCCCCCCHHHHSSSSSSSCCCCCCHHHCCCCCCCCCCCCC |
Confidence | 9988898344036654677872377750002663341257766421233206630003578889898877431345770231024465788889987642002221137621121011013677416778803307867678777899 |
H:Helix; S:Strand; C:Coil | |
Sequence |
20 40 60 80 100 120 140 | | | | | | | MPGGDTTPEEAAAPSCAGYNPGLLLFRAQKAQGACVTSTEGAWPRRASALYGGRKMRCGESGAGPDPRSNSAEVSSSQPALASKSQSKWGPTSNNPRGALTTTEFEMAGNRSQNIKHKQTALIAIPMSSQTPRMLGRPRNQGQLYPQP |
Prediction | 8666544465333441342420001020452442223336332444141234444241366444454555545245544323455565244457434231334415334544551544411000022446234324434754533568 |
Values range from 0 (buried residue) to 8 (highly exposed residue) | |
Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Downloadalignment | 20 40 60 80 100 120 140 | | | | | | | | |||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
SS Seq | CCCCCCCHHHCCCCCCCCCCCCSSSSSSCCCCCCSSSCCCCCCCCHHHHHHCCCCSCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCSSSSSSCCCCCCCCCHHHHSSSSSSSCCCCCCHHHCCCCCCCCCCCCC MPGGDTTPEEAAAPSCAGYNPGLLLFRAQKAQGACVTSTEGAWPRRASALYGGRKMRCGESGAGPDPRSNSAEVSSSQPALASKSQSKWGPTSNNPRGALTTTEFEMAGNRSQNIKHKQTALIAIPMSSQTPRMLGRPRNQGQLYPQP | |||||||||||||||||||
1 | 5u47A2 | 0.10 | 0.10 | 3.74 | 0.59 | CEthreader | PTRFGMVGESSGIVSQNSVNIAQSSFGQGISRAFTAISNNGIMLEPQFIKGTVRTAKKEVIGKPVSKQAASPIIQVGNNDVTVKSGTAQVPDEKTGTYKTLNSVVAMVPSEDPEYIMYVTVQEPKTWNNNFFATVVNPVLEEAMSMGA | |||||||||||||
2 | 1sva1 | 0.06 | 0.05 | 2.34 | 0.67 | EigenThreader | KLVIKGGIEVLGVKTGVDS---FTEVE-------CFLNPQMGNPDEHQ-------KGLSKSLAPDKEQLPCYFAVGEPLELQGVTVTPKNATVDSQQMNTDHYPWVPDPSKNYVSAVDICYFKITLRNPYPISFLLSDLINRRTQRVD | |||||||||||||
3 | 5hx2F | 0.16 | 0.11 | 3.83 | 0.30 | FFAS-3D | ---GSPRPEELANAIYGNPQLYWVLLMCND-----NYDPYYGWITSQEAAYQASIQKYKNVGGDQIVYHVNENGEKFYNLISYDDNPRKYPQYEGALAAVDTYEAAVLENEKLQIK-------------------------------- | |||||||||||||
4 | 6ahfC1 | 0.10 | 0.09 | 3.53 | 0.73 | SPARKS-K | LTILTLAQKLASDHQHPQLQPIHILAAFIETPEDGSVPYLQNLIEKGRYDYDLKKVVNRNLVRIPQQQPAPAEITPSYALGKVLQDAAKIQKQQKDS-FIAQDHILFALFNDSSIQQIFKEA---QVDIEALELRGNTRIDSRNTPLE | |||||||||||||
5 | 4da2A | 0.13 | 0.03 | 0.94 | 0.28 | CNFpred | ---------------------AMIVFIGALPNVSKFKPYKKGDPKIAELLKE------------------------------------------------------------------------------------------------ | |||||||||||||
6 | 3q1nA | 0.10 | 0.07 | 2.75 | 0.67 | DEthreader | ----FDTQLAVTVHYT--VTNPFALGFHPAFNVYDLTVLNSPLQRFVILLLDGGLVI------LANSEIAKATLASPHDH-SI--TLDIS--D-----FPYLTIWS------APFIA-VEPFGGNTTLS-AGAN--K------LALKV | |||||||||||||
7 | 2c9kA2 | 0.04 | 0.03 | 1.50 | 0.82 | MapAlign | ------------------EIYQVLNFHLFTWLDSLNFYEKATSHYNMFHYTLDNISQKSSVFGNHNVTDKLKSLGLATNIYIFLLNVISLDNKYLNDYNISKMDFFITNGTRLLEKELTAKTQVYTFAWTHS---------------- | |||||||||||||
8 | 6eu4A | 0.18 | 0.17 | 5.51 | 0.49 | MUSTER | PETTFAVPEEIGISSLTAFT-KLGVYYTTNA---SVDAYVKGVRYQDGAKFSGLVDSLSTSAKSLGNESITNLRGSLGNAVLVQSSTANATVANGPSSGVPYLVQQWSSAAGNN---SYNAQLAFAISSASATFWLRTGDYGQAYA-S | |||||||||||||
9 | 2pffB | 0.21 | 0.21 | 6.65 | 0.68 | HHsearch | ADDEPTTPAELVG-KFLGYVSSLVEPSKVGQLNLCLTEFENCYSGPPQSLYGLNLTLRKAKAPSGIPFSEKLKFSNRFLDLINKDLVKNNVSFNAKDIQIPVYTFDGSDLRSGSISERIVDIIRLPVKWETTTQFKRVIVAGTLDINP | |||||||||||||
10 | 2c9kA2 | 0.07 | 0.07 | 2.79 | 0.54 | CEthreader | EESPYKYYDFQYQEDSLTRRPHLFYEKAQTTPNNFFTSH-----YNMFHYTLDNISQKSSVFGNHNVTDKLKSLGLATNIYIFLLNVISLDNKYLDYNNISKMDFFITNGTRLLEKELTAGSGQITYDVNKNIFGLPILKRREETLFP | |||||||||||||
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Top 10 structural analogs in PDB (as identified by
TM-align)
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Top 5 enzyme homologs in PDB
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Template proteins with similar binding site:
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References: | |
1. | Wei Zheng, Chengxin Zhang, Yang Li, Robin Pearce, Eric W. Bell, Yang Zhang. Folding non-homology proteins by coupling deep-learning contact maps with I-TASSER assembly simulations. In preparation, 2020. |