Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Downloadalignment | | 20 40 60 80 100 120 140 160
| | | | | | | | |
| SS Seq | CCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCSSSCCCCCCCCCHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHCHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCSCCCCCCCSCCCCHHHHHHHHHCCC SRPQSSPADRESPFQARTRRLRSLQAQEMILKMKESISERIKFVPVPCGHQDWSEEEEGRTVVPPRPSTVSGSRRAPERQTRSQSESCLQSHVEDPTFQELRRVQRDLSQKLEAFYALGAKGQGQSQEQILQPRAAAVWPNGTCRVSPSNTTSRLKASLTKN |
1 | 5m89A | 0.05 | 0.05 | 2.33 | 0.43 | CEthreader | | EPVTATEWTGTKVVIGTAKGWVKVYDAGRESATFQTHAGPVTGLAVHPGGRILASVGVDKSFVFYDLETGERVARGYADAALTTCAFHFAAGTQTGHILVFHTTTLEQAESFPLGTPIQAAATGKGTSSVTIFDLRKSGAAAAVKELQTGEVLSISWDYTGQ |
2 | 3i1nC | 0.04 | 0.04 | 1.86 | 0.57 | EigenThreader | | NSKSGGITTRHIGGGHKQAFKRNK---------------DRLEYDPNR--SANIALVLYRRYAPKGIQSGVDAANTLGSTVHNVGQLARSAGTYVATNAEHMLRVLGKAGAARWRGTAMNPVDHPHGGGVTPWGVQTKGKKTRSNKRTDK----FIVRRRS- |
3 | 3c7nA2 | 0.10 | 0.05 | 1.83 | 0.42 | FFAS-3D | | --------------------TEDRKNEEYIYTLRGKLEEEYA-------------------------PFASDAEKTKLQGMLNKAEEWLYDEGFDSIKAKYIAKYEELASLGNIIRGRYLAKEEEK------------------------------------ |
4 | 5yfpB | 0.07 | 0.07 | 2.99 | 0.81 | SPARKS-K | | ILIGDSNIIESYQKSLILKEEQINEVRLKGEEFITSVSQNLIFFTSSQSSLPSSLKDSTGDITRSNKDSGSPLDYGFI-PPNCNGLSCLRTNGITICRNTLSTIINRCVGAISSTKLRDISNQLENWQVYETVTFSSKSQDSSKNLTFEYGVTQFPEIVTSF |
5 | 5ot4A | 0.09 | 0.04 | 1.41 | 0.42 | CNFpred | | -----------------------GLVVDQLRRQVVALEGHLKSLPKEGEFKAAGLTLEQKAEIKK-------------------------------LRTDLEAELSAVREDLDFYKKIQGK----------------------------------------- |
6 | 3ayfA | 0.06 | 0.05 | 2.11 | 0.83 | DEthreader | | --EMAP-RPKEVTKIIQAFQGLNIAKGYHLQLAIFWIATAWLGMLL-----LFIVF---RGVKLFYSA--------IAPFFYIA--Q--FTADRWWIIHWVEGFMMVYGMFAIAV---------AWNDKWLFSWMILAGVVITRVPIFLIGVVALLVA---- |
7 | 2z3wA | 0.06 | 0.06 | 2.50 | 0.71 | MapAlign | | TNFAGFDPKGTRLYFESTEASPLERHSGMHRTQLSPDGSAIIDIFQSPTVPRKVTVTNITLLEAGWDIYMAQKGYAVFTVDSRGSANRGAAFEQVITEMADQMCGVDFLKGFMTTNLMLTHGDVFKVGVAGGPVIDWNRYAIMYGERYFDAPQENPEGYDAA |
8 | 6etxG | 0.10 | 0.10 | 3.67 | 0.69 | MUSTER | | EGESHQRYLRNKDFLLGVNFPLSFPNLCSCPLLKSLVFSSHCKAVSGYSDQVVHQRRSATSSLRRCLLTELPSFLCVASPRVTAVRRVLKEGGSLAAKQCLLNGAPELAADWLNRRSQPEPAGGLWSIRPQNGWSFIRIPGKESLITDSGKLYALDVLLSQG |
9 | 2rsyB | 0.27 | 0.06 | 1.90 | 0.71 | HHsearch | | ---------------------------------------------------------------------------GP-LGSKRFSSLSYKSREEDPTLTEEE---------ISAMSSVNKPG---------------------------------------- |
10 | 2v5oA1 | 0.09 | 0.07 | 2.59 | 0.43 | CEthreader | | ----------------CQVTNPSSLSGRAGFTAAYSEKGLVYMSNENCPPGVGACFGQTRISVGKANKRLRYVDQVLQLVYKDGSPCPSKSGLSYKSVISF--VCRPEAGPTNRPMLISLDKQTCTLFFSWHTPLACEQA---------------------- |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Download alignment lists the threading program used to identify the template, and provide the 3D structure of aligned regions of threading templates (threading[1-10].pdb.gz). |
(f) | Template residues identical to query sequence are highlighted in color. |
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