Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Downloadalignment | | 20 40 60 80 100 120 140 160 180 200 220 240 260 280 300 320 340 360 380 400
| | | | | | | | | | | | | | | | | | | | |
| SS Seq | CCCCCCCCHHHHHHHHHHHHSSCCCCCCCCCCCCCCSSCCCCCSSSCCCCCCSSSCCCCCCHHHHHHCCSSSSSSSCCCCCSSSSCCCCCCCCHHHHHHHHHHHHHCCCHHHCCCCSSSSSCCCCCCSSSSSSSCCCCCSSSSSSSSSSCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCSSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHSSSSCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHCCCCHHHHHHHHCCCCCCCHHHHHHHHHHCCCCCCCHHHHHCCCCCC MGPRQGRWWLLLWLPPLATLPVRGEAAAAALSVRRCKALKEKDLIRTSESDCYCYNQNSQVEWKYIWSTMQVKITSPGLFRIVYIAERHNCQYPENILSFIKCVIHNFWIPKESNEITIIINPYRETVCFSVEPVKKIFNYMIHVNRNIMDFKLFLVFVAGVFLFFYARTLSQSPTFYYSSGTVLGVLMTLVFVLLLVKRFIPKYSTFWALMVGCWFASVYIVCQLMEDLKWLWYENRIYVLGYVLIVGFFSFVVCYKHGPLADDRSRSLLMWMLRLLSLVLVYAGVAVPQFAYAAIILLMSSWSLHYPLRACSYMRWKMEQWFTSKELVVKYLTEDEYREQADAETNSALEELRRACRKPDFPSWLVVSRLHTPSKFADFVLGGSHLSPEEISLHEEQYGLGGAFLEEQLFNPSTA |
1 | 6v4aA | 0.07 | 0.07 | 2.72 | 0.72 | CEthreader | | ---------------------------------------GRVQHFTGYIEDGRGIFYSLPDMKQGDIIYASMQNTGGNLDPLVGIMAEEIDPASELTAVADRIFLGWDDDGGKGYSASLEFTDGTYHIFAGSTITYTTGSFQLILGLNAPQVISGEGEPEGEVFASLAIKPEAHVQELEIRLDKDTRYLTQHTRNLQPGDTFHALVEPIGEAP-LPRLRLTDSGGKPLAFGLIDQPGESVELNYTCDQDICELVVHVDGTDGQKDSGEAVYRLLVGINAPNLSSVFLESDLVTVGLAVDQIVGVDQRSENFSVVGTLKPKLGFSPDQCGCTVKSFEDASIRAVAGEINLPLPSFSFYNQQGNRWSQNQVIFVTPDGRASYFERFTVTLQAPDFDFLAYPFDRQKFSIKVDLAVPTNM |
2 | 2hg4D | 0.07 | 0.06 | 2.34 | 0.72 | EigenThreader | | GFFGISPREALADPQQRIL-EISWEALERAGHDPVSGVGTVDYSGLTALHLAGVTVSSPGAFTEFRCKPFRGSAVDLTAPSVEAHGTGTRL--GDPIEVHALLSTYGAERDPDDPLWIGSVGHTQAAAGVVSSFGISGTNAHVIVEEGRDE---------------------QAR-----AQAGRLADHLARE---------PRNSLRDTGFTLATR---------------------------RDEALAGLRAVAD---GGARDLLRESQVFADSIRDCERAL--AWSLTDLLSGDVVQPALFAVVSLAALWRSH----------GVEPAGHSQGEIAAAHVAKLVAVRSRVLRRLGGQGGASFGL-----GTEQAAERIGRFAGASGPLDELIAECEAEAHKARRI----PVDYA |
3 | 5z1fA | 0.12 | 0.08 | 2.98 | 0.85 | FFAS-3D | | ----------------------------------------------------------------------------QTAAVVFFTT------------RVAAASAAQSLHCQMVDKWTVTEAPEPRQLL--------WQNLNIKLFSRIIRQYFIYFFVAVTILFYMIPIATRTVLESFLPQIALIVFLAMLKLLLFLSKAEGIPSQSHAIRAASGKYFYFSVFMIINLLATSLPKSATFFLTYVALKFFIGYGLLKKKYLCKTEAYATRVPGDMLILTITFCYSVIAPLILIFGITYFGL-----------GWLVLRNQALKVYVPSYE----SYGRMWPHIHQRILAALFLFQVVMKTFFYTALVIPLII-TSLIFGYVCRQKFHTALEVACRELKQSP-----DLEEIFRA--- |
4 | 5cqcA | 0.09 | 0.07 | 2.53 | 0.77 | SPARKS-K | | NKGMNSSRLHKLYSLFFDKSSAFYLGDDVSVLLTGAYGFQSKK----NDQQIFLFRP------------------DSDYVAGYHVDAKSDAGWVNDKLDRRLSEISEFCSKATQ-PATFILPFVVQHQVLTISYDPKSKQLTPTVYDSIGR-----------------DTYSESLSSYFKGKCDEILTQSIEKAIFTLGKFYNTEGN----------CGSYTFRTIKEVISSSAQGY------------------------LT-SQHVQDIESCIKYRNLGALTEGKTLPVQLSEFIVALEDYGKLRSAKLTAVELLIGILNDIKGKNE----ISESQYDKLVKEVDCLMGKLVQFHLKNLGAESLQKLVLPCVKFD---------------------------------------- |
5 | 7d3uA | 0.15 | 0.07 | 2.27 | 0.95 | CNFpred | | --------------------------------------------------------------------------------------------------------------------------------------------------------VIAVLIAMAAFTKSAQAWLPDAMVAATPVSAYLHAAAMVKAGIYLLLRFSEALWNLLLITCGMTTAVLGAVFAMQRDLKELLAYSTISQLGFLVATIGVGTPAAMVAA------IIHTIAHALFKSSLFMFVGVVD-PGTAIGVGLAAASMAGLLLGFVSKEWMFKSMLDAPG----------GPALGALAVFAATFTFAYSARFL----------------------------------------------------------- |
6 | 5a1uC | 0.04 | 0.02 | 1.28 | 0.67 | DEthreader | | -----------------HHEYPWIVWNTCVCVLTGHYVMCA-SASLDQTVRVWD------------------LEGHDR-V--AAFHP--P-----------WRMNE--SKAWEVDTCAVFHPR--------------------WVLAFAVFKLERERP-YY----------------------SYNPAENAVLLYTI-DA-SQNPDAPEGKR--G-TAVW--AVLDRMHSLLIQVPNCD-FDVQQL-DMSHVNR-AWDESGVFAVTTHGIIYVTRVVYCLDREC--------RP--RV---------NAKLVGQSIIAYLQKATSLALIEILNQI--MNLEKLRKMMKIAEIHRRILKNCGQKSLAYLSATHGLDEEAESLKET-------------PAPIMPL------------- |
7 | 6v4aA | 0.07 | 0.06 | 2.27 | 1.18 | MapAlign | | --------------------------------------GRVQHFTGYIDGRGIFYSLPDMK----QGDIIYASMQNTGNLDPLVGIMAALASENDLISELTAVADRIDDDGGKGYSASLEFTIGTYHIFAGSTTT---GSFQLILGLNAPIKPEAHVQELEIRLDKDTRYLTQHTRNLQPGDTFHALVEPIGEAPLPRLRLTDSGGKPLAFGLID-----------------------------QPGESVELNYTCDQDICE----LVVHVQKDSGEAVYRLLVGINNSRFTTTLLVKRNLEYYILRIFVPLFLIISVSWVIFFLKDYGRQLEVASGNLLVFVALDRFMIVSFCLTAIVVLISVCQKRLGAVGKQAVAAQIDTWVLVIYPLVYSLYIIWVYLRF------------- |
8 | 5mz61 | 0.09 | 0.09 | 3.29 | 0.61 | MUSTER | | KTWKMDKSSKDMFSATEFAMNYLKKSEYRVEMLEKLMKLRD-KVKSDPTRSFSRYELASYVSWLCSTLS-NVPVGSALRECEFPDRVSHIQEAALKSDSLVRNRIPGLASSQFDNSVNASIWPFLDG-------HQEDSNYYVHIIAWHFEMRRECALVNAQTRDSMSAMIL-NLRVALKSASFFRVLQTTNTLAYYSSIIEEAGSEKNAKLMRVSCVNLLNVCTIYPLHSSFAAEYMMSYAIHS-QLSIKHFNDEFARIRERMSSQVLMHIIQNEIFGMCVIRWLTKKDTMEIFNNALKIVRYLQQRTTDMILAVTQLGRQLEFPMECNYSWMRPTIDKERFEKVRLAMRNEMNHYGHIL-YREWRCRLFARDPWEAAYAWAESTQIGARNAVQSRLEKCKRGLVT----MSGHDR |
9 | 1vt4I3 | 0.14 | 0.05 | 1.56 | 0.45 | HHsearch | | ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------EYALHRSI-------VDHYNIPKLIPPY------------LDQYFYSHIGHHLK---------------------------------------------------------NIEHPERMTLFRMVFLDF-------RFLEQKIR---HDSTAWNASGS-----------ILNTLQQLKFYPICDNDPKY--ERLVN---AILDFLPKILICSKYTDLLRIALMAEDEAIFEEAHKQVQRG |
10 | 4tlgA | 0.06 | 0.02 | 1.03 | 0.62 | CEthreader | | PVEFGGTMTDPDGNPKCLTKINYGGEVPKSYYLCEQVRLQYEHTRSVGRGSSLQVENEILFP----GCVLRWQFASDGGDIGFGVFLKTKMGEQQSAREMTEVLPSQRYNAHMVPEDGSLTCLQAGVYVLRFDNTYSAKKLSYTVEVLLPDKASEETLQSMR--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Download alignment lists the threading program used to identify the template, and provide the 3D structure of aligned regions of threading templates (threading[1-10].pdb.gz). |
(f) | Template residues identical to query sequence are highlighted in color. |
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