Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Downloadalignment | | 20 40 60 80 100 120 140 160 180 200 220 240 260 280 300 320
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| SS Seq | CCCCCSSSSCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCSSSSSCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHCCCCCCCCHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHCCCHHHSCCCCCCCCCCCCCCCSSSSSSCCCCCCCCCCCCCSSCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC MLSPTFVLWDVGYPLYTYGSICIIALIIWQVKKSCQKLSLVPNRSCCRCHRRVQQKSGDRTSRARRTSQEEAEKLWKLLFLMKSQGWLPQEGSVRRILCADPCCQICNVMALEIKQLLAGENNQISLTSLGPSQGSSCLEALSTSSVSFKHSQDLGSPKSKELSLASVTPTLSQLMDQKSLTQSAARSAGADSVQDSWADHFQRGQRSQVPAVSQVMGSLSSNFEKPGIPLSQQERTKNNSKFVLENQEAPEVGLDNKMKLFLHWINPEMKDRRHEESILLSKAETVTQDRTKNIEKSPTVTKDHVWGATTQKTTEDPEAQPPSTEEEGLIFCDAPSA |
1 | 1vt4I | 0.05 | 0.05 | 2.26 | 1.05 | MapAlign | | TSRSDHSSNIKLRIHSIQAELRRLLKSIYLELKVKLLIPPYLDQYFYSHIGHHLKNIEHPERMTLDNDPKYERLVNAILDFLPGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG----- |
2 | 2pffB | 0.18 | 0.15 | 4.80 | 1.20 | HHsearch | | LENPSNTPDK-DYLLSIPISCPLIGVIHYVVTAKLLGF--TP--------------------GELRSYLKGATHSQGLVTAAETDSWESFFVSVRKA-----------ITVLFFIGVRCYEAYPNT----SLPPSIVPSPMLSISNLTQEQVQDYVNKTNSHLPAGKQ-VEISLVNGAKNLVVSGPAPSGLSRIPFS-----ERKLKFSNRFLP----VASPFHSHLLVPASDLDLVKNNVSFNAKDIQIPVYDTGSDLRVLSGSISERIV-----DCILPVKWETTTQFKATHIL-----DFGPGGASGLGVLTHR-------NKDTGVTLDINPDD |
3 | 1vt4I | 0.05 | 0.05 | 2.28 | 0.51 | CEthreader | | GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG |
4 | 6gmhQ | 0.06 | 0.06 | 2.58 | 0.63 | EigenThreader | | GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGVEAMQAESCYQLARSFHVQEDQAFQYYYQATQFASSSFVLPFFGLGQMYIYRGDKENASQCFEKVLKAYPNNYETMKILGSLYAASEDQEKRDIAKGHLKKVTEQYPDDVEAWIELAQILEQTDIQGALSAYGTATRIL------QEKVQADVPPEILNNVGALHFRLGNLGEAKKYFLASLDRAKAEAEHDEHYYNAISVTTSYNLARLYEAMCEF |
5 | 6em3n | 0.11 | 0.09 | 3.12 | 0.45 | FFAS-3D | | -IYPRF------YYAKDIQYLM-HEPVLAKFRKLTRALGRGEVSSAKRLEENRDSYTLDHIIKERYPSFPDARDIDDALNMLFLFSNLPSTNQVSS-----KIINDAQKICNQWLAYVAK---------------ERLVRKVFVSIKGVYYQANIKGEEVRWLVPFKFPENIPSDVDFRIM----------LTFLEFYSTLLHF-VLYKLYT--------DSGLIYPPKLDLKKDKIISGLSSYILESRYDSP-VASLFSAFVFYVSREVPIDILEFLILSCGGNVISEAAMDSKVTHQIVDRPVLKNKVAGRTYIQPQ------------------- |
6 | 5yfpA | 0.07 | 0.06 | 2.60 | 0.81 | SPARKS-K | | LDEISLNQLLECPIREKNLPWMENQLNLLLKAFQAIGSDGNEVEY-----NLREISGKQRLQFYEKVTKIFLNRIVEEMQKKFSNIRGQDISH--------DQMIRILTTLLIFSPLIL---------FCKEISQKSYQAIVEIQPVYMELQLQGIDTNDEKMNELSLSQLLNEWRKERKTNDINPVFKNSFECLQTMRQECIVYQNFVEISSKHNFEEYIKHFNDPDAPPILMQSDREAAVIETQLVSRIFQPIVT---RLSSYFVELVKAEPTVENEIKSLESSNHEFLLSAVTRMYTQIKQVWSDNVEEQVLHFERISNATTNGEILPGILDLPV |
7 | 6co7A | 0.16 | 0.05 | 1.58 | 0.55 | CNFpred | | -----RVLWEAGR--EPMAAALMASRLLKRMASRAQEDNTI----------------TDISSDLYDHARLFEERAVGVLDECFNEN----ETLSQTLLVRELSRMTALELAVESQDFIA----------------HTSCQVLLT-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- |
8 | 6yufD | 0.08 | 0.05 | 2.13 | 0.67 | DEthreader | | ------FPNLDIIFYTVPILVTLDNSKTHLPTARSNSIK---R-SAIVRDCIISI-LNIRVDIASKLSLEVLEKLFSPASNELDCQKGYEQ-LTFLEKQK---LRVQYFPLLLSCLFNQLIEVVTEKGILYEI----MS-TLFV---------------------------------F--SRAFPFLFDLSYLHLLKPYLRSASTQRLVVFRQVLPFQKEIS--------------SLFTRLNDYERLKIVVSCLSLEEARHWKHSLDFI----SPECDDAYILLMSRICLRELAADEQKLSLGKQNV------------------------------ |
9 | 1vt4I3 | 0.07 | 0.07 | 2.72 | 0.97 | MapAlign | | FYSHIGHHLKNIEHPERMTLFRMVFLDFRFLEQKIRHDSTAWNASGSILNTLQQLKF--YKPYICDNDPKYERLVNAILDFLPKILICSKYTDLLRIALMAEDEAIFEEAHKQVGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG-------GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG---GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG |
10 | 2atyA | 0.09 | 0.08 | 2.95 | 0.64 | MUSTER | | PIAVVIRYSSGTFRLIGEKSLLCIT-GTW----DKPAPKCEYFNK-------YSSCPEPIVPGGYKI----------------RGSTPYRHGDSVTFACNGNKSVWCQA------------NNMWGPTRLPTCVSVFPLEGSIEGRGGSELADPEVPRDCGCKPCICTVPEVSSVFIFPPKPKDVLTITLTPKVTCVVVDI---SKDDPEVQFSFVDDVEVHTAQTQPREEQFNSTFRSVSELPIMHQDWLNGKENSAAFPAPIEKTISKTKGRPKAPQLYTIPPPKEQMAKDKVTDFFPEDWNGQPAENYKNTQPIMNTNESYFVYSKLNVQKSNWE |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Download alignment lists the threading program used to identify the template, and provide the 3D structure of aligned regions of threading templates (threading[1-10].pdb.gz). |
(f) | Template residues identical to query sequence are highlighted in color. |
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