Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Downloadalignment | | 20 40 60 80 100 120 140 160 180 200 220 240 260 280 300 320 340 360
| | | | | | | | | | | | | | | | | | |
| SS Seq | CCCCCCCCCHHHHHHHHCCCCCCCCCCCCCSCCCCCHHHHHCCCCCCCCHHHSCCCCCCCCCCCCCCCCCCCCCCSSSSSSSCCCCCCCCHHHHHHHHHHHHHHHCCCCCSSSSSSSCCCCSSSSCCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCSSSSSSSCCCCCCCCCHHHHHHHHHHHHCCCSSSSSSCCCCCHHHHHHHHCCCCCSSSSSCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCSSSSSCCCCCSCCCCCSSSSSSSSCCSSSSCCCCCSSCCCCCCCCCCSCCCCCCSSSSSSSSCCCCCSSCCCSSSSSSCCCCCHHHHHHHHHHHHHHHHHHHHHHHHC MGSHESLGPYFLVFLLLLLLPPPLFRAGSLRYHGPDWRIFHRLALGSRRAHHHHGPGWRQHWRQGQAGHRCQGSFDLYFILDKSGSVNNNWIDLYMWVEETVARFQSPNIRMCFITYSTDGQTVLPLTSDKNRIKNGLDQLQKIVPDGHTFMQAGFRKAIQQIESFNSGNKVPSMIIAMTDGELVAHAFQDTLREAQKARKLGANVYTLGVADYNLDQITAIADSPGHVFAVENGFKALRSTIDALTSKVCLDVTSVEPSSECVGEPYHVVIHGNGFQNLKKRDEVICRFIFNESTIIDEKPTSIDNNSMNCPGPKLEKPGEEYSIEVSLNKGKTFFKSNVSITSTTCGIFRNWLYFVPLLLLVPLLLCCVWRLCR |
1 | 3k71G | 0.16 | 0.11 | 3.63 | 1.00 | DEthreader | | ----------------------------------------------------TVHHE--RNM---------RQEQDIVFLIDGSGSISRNFATMMNFVRAVISQFQRPSTQFSLMQFSNKFQTHFTFFRRSSNPLSLLASVHQLQ-G-FTYTATAIQNVVHRLFHASGARRAAKILIVITDGKKE-GDSLDYKDVIPMADAAGIIRYAIGVGLFSWKELNDIASKSEHIFKVEDFDA-LKDIQNQLKEKIFAIEGSSSSFE-MA----GAVGS--FT----------GGAFLYSPTFINMSQENV-----DMRDSYLGYSTE----------------------VLGAPGKGSYFAPHYYEQTRGGHP-------- |
2 | 3k71G | 0.15 | 0.15 | 4.93 | 0.92 | MapAlign | | CGYSTGACEPIGLNMSLGLSLASTTSPSQLLACGPTVHHECGRNMYLTGLCFLLGPTQLTQRLPVSRQECPRQEQDIVFLIDGSGSISRNFATMMNFVRAVISQFQRPSTQFSLMQFSNKFQTHFTFFRRSSNPLSLLASVHQLQG--FTYTATAIQNVVRLFASYGARRDAAKILIVITDGKKE-GDSLDYKDVIPMADAAGIIRYAIGVGAFSWKELNDIASSQEHIFKV-EDFDALKDIQNQLKEKIETPDGPVLGAVGSFTWSGGAFLGYSTELALWKGVSLVLGAPRYQHTGKAVI-FTQVSRQWRMKAEVTGGSYFGASLCSVDVDSDGSTDLVLIGAPHYYEQTRGGQVSVCPLPRGWRRWWCDAV--- |
3 | 3n2nF | 0.48 | 0.24 | 6.88 | 1.23 | SPARKS-K | | -------------------------------------------------------------------SMACYGGFDLYFILDKSGSVLHHWNEIYYFVEQLAHKFISPQLRMSFIVFSTRGTTLMKLTEDREQIRQGLEELQKVLPGGDTYMHEGFERASEQIYYENQGYRTASVIIALTDGELHEDLFFYSEREANRSRDLGAIVYAVGVKDFNETQLARIADSKDHVFPVNDGFQALQGIIHSILKKSC----------------------------------------------------------------------------------------------------------------------------- |
4 | 4cn8A | 0.16 | 0.13 | 4.24 | 0.61 | CEthreader | | ------------------------------------------------------------------DAEECDVQADIIVLFDDSSSIQENYQMMKDFVKELVDSFTTVGSQFGVVQFSQGVKTAFPLNKTKEDIKKGIQDMVPRN-GGQTEIGTGLKHVRENSFSGAEGGGKQKIVILMTDGKSNAGA--PPQHEAHKLKAEGVTVIAIGIGGFVKTELEQIATMKNYVLTTN-SFSELSTLLKLVIDLACEVCVVDCAGH------ADIAFVFDASSSINANNPNNYQLMKNFMKDIVDRFNKTGPDGTQFAVVTFADRATKQFGLKDYSSKADIKGAIDKVTPSIIGQTAIGDGLENARLEVFPNREVQKVVIL |
5 | 3n2nF | 0.48 | 0.24 | 6.88 | 1.04 | MUSTER | | -------------------------------------------------------------------SMACYGGFDLYFILDKSGSVLHHWNEIYYFVEQLAHKFISPQLRMSFIVFSTRGTTLMKLTEDREQIRQGLEELQKVLPGGDTYMHEGFERASEQIYYENQGYRTASVIIALTDGELHEDLFFYSEREANRSRDLGAIVYAVGVKDFNETQLARIADSKDHVFPVNDGFQALQGIIHSILKKSC----------------------------------------------------------------------------------------------------------------------------- |
6 | 4cn8A | 0.18 | 0.14 | 4.42 | 1.96 | HHsearch | | ------------------------------------------------------------------DAEECDVQADIIVLFDDSSSIQYNYQMMKDFVKELVDSFTGVGSQFGVVQFSQGVKTAFPLNKTKEDIKKGIQDMPRNG--GQTEIGTGLKHVRENSFSGEGGGNKQKIVILMTDGKSNAGA--PPQHEAHKLKAEGVTVIAIGIGGFVKTELEQIATMKNYVLTTN-SFSELSTLLKLVIDLACEVCV-----VDCA-GHADIAFVFDASSSINNNYQLMKNFMKDIVDRFNKGPDGTQFAVV--------TFADRATKQFGLKDYSSKIKGAIKVTPSIIGQTAIGD------GLENARLEVFPNR-E |
7 | 3n2nF | 0.48 | 0.23 | 6.81 | 1.79 | FFAS-3D | | -------------------------------------------------------------------SMACYGGFDLYFILDKSGSVLHHWNEIYYFVEQLAHKFISPQLRMSFIVFSTRGTTLMKLTEDREQIRQGLEELQKVLPGGDTYMHEGFERASEQIYYNRQGYRTASVIIALTDGELHEDLFFYSEREANRSRDLGAIVYAVGVKDFNETQLARIADSKDHVFPVNDGFQALQGIIHSILKKSC----------------------------------------------------------------------------------------------------------------------------- |
8 | 7jpkF | 0.14 | 0.13 | 4.48 | 0.98 | EigenThreader | | IYEGSTIVLNELNWTSAL--DDVFKKNREEDPSLLWQVFG--SATGLARYYPASPWVDNSRTPNKIDLYDVRSPKDMLILVDVSGSVSGLTLKLIRTSVSEMLETLSDDDFVNVASFNSNAQDVSLVQANVRNKKVLKDAVNNITAKGITDYKKGFSFAFEQLLNYNVSRANCKIIMLFTDGGEERAQEIFAKYN-------KDKVFTFSVHNYDRGPIQWMACENKGYYYESIGAIRINTQLDVLGRPMVLAITGQFENKTNLKNQLMGVDVSLEDIKRLTPNGYYFAIDPNGYVLLHPNLQPKPPVTLDFLDAELENDGESTYTWTPVNG-----TDYSLALVLPTYSFFIDRKDLINRVLLDAGFTNELVQNY |
9 | 3n2nA | 0.48 | 0.24 | 6.88 | 1.46 | CNFpred | | -------------------------------------------------------------------SMACYGGFDLYFILDKSGSVLHHWNEIYYFVEQLAHKFISPQLRMSFIVFSTRGTTLMKLTEDREQIRQGLEELQKVLPGGDTYMHEGFERASEQIYYENQGYRTASVIIALTDGELHEDLFFYSEREANRSRDLGAIVYAVGVKDFNETQLARIADSKDHVFPVNDGFQALQGIIHSILKKSC----------------------------------------------------------------------------------------------------------------------------- |
10 | 4cn8A | 0.18 | 0.13 | 4.25 | 1.40 | CNFpred | | ---------------------------------------------------------------------ECDVQADIIVLFDDSSSIQENYQMMKDFVKELVDSFTTVGSQFGVVQFSQGVKTAFPLNKTKEDIKKGIQDMVPR-NGGQTEIGTGLKHVRENSFSGAEGG-KQKIVILMTDGKSNAGA--PPQHEAHKLKAEGVTVIAIGIGQGVKTELEQIATMKNYVLTTN-SFSELSTLLKLVIDLACEVC-----VVDCAG-HADIAFVFDASSSINNNYQLMKNFMKDIVDRFNKGPDGTQFAVVTFA--------DRATKQFGLKDYSSK------------ADIKGAIDKVT-TAIGDGLENARLEVFP |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Download alignment lists the threading program used to identify the template, and provide the 3D structure of aligned regions of threading templates (threading[1-10].pdb.gz). |
(f) | Template residues identical to query sequence are highlighted in color. |
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