Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Downloadalignment | | 20 40 60 80 100 120 140 160 180 200 220 240 260 280 300 320 340 360 380 400 420 440 460
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| SS Seq | CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC MMARRDPKSWAKRLVRAQTLQKQRRAPVGPRAPPPDEEDPRLKCKNCGAFGHTARSTRCPMKCWKAALVPATLGKKEGKENLKPWKPRVEANPGPLNKDKGEKEERPRQQDPQRKALLHMFSGKPPEKPLPNGKGSTESSDHLRVASGPMPVHTTSKRPRVDPVLADRSAAEMSGRGSVLASLSPLRKASLSSSSSLGPKERQTGAAADMPQPAVRHQGREPLLVVKPTHSSPEGGCREVPQAASKTHGLLQAARPQAQDKRPAVTSQPCPPAATHSLGLGSNLSFGPGAKRPAQAPIQACLKFPKKPRLGPFQIPESAIQGGELGAPGNLQPPPAATELGPSTSPQMGRRTPAQVPSVDWQPPHSTPCLPTAQACTMSHHSAASHDGAQPLRVLFRRLENGRWSSSLLAAPSFHSPEKPGAFLAQSPHVSEKSEAPCVRVPPSVLYEDLQVSSSSEDSDSDLE |
1 | 5jcss | 0.08 | 0.07 | 2.93 | 1.73 | SPARKS-K | | VRINEDHQKDSSNKIYNLNMIGMRIWNVIELEEPSEEDLTHILAQKFPILTNLIPKL---IDSYKNVKSIYM-NTKFISLNKGAHTRVVSVDILFKNNGINKPDQLIQSSVYDSIFSEAADCFAGAIGEFK---ALEPIIQAIGESLDIASSRISLFLTQHVPTLENLDDSIKIGRLKEKLNIQKKSMNSTLFAFTNHSLREQISVCIQMTEPVLAKMLAKKLTVINVSQQTETGDLLGGYKPKTVAVPIQENFETLFNATFSLKKNEKFHKMLHRCFNKNQWKNVVKLWNEAYKMAQSILKITNTENENENAKKKKRRLNTHEKKLLLDKWADFNDKKFEAQSSSIENSFVFNFVEGSLVKTIRAGEWLLLDEVNLATASDLLTEPDSRSIL-----LSEKGDAEPIKAHPDFRPATKRDLPMGIRSRFTHSPERDI---------TDLLIGKYSVSDEWVGN |
2 | 4wrnA | 0.07 | 0.07 | 2.73 | 1.21 | MapAlign | | -------------------------------HHKTEEGKLVIWAATGDGPDIIFWAHDRFGGYAQSGLLAEITPDAVRYNGKLIAYPIAVEALSLIYNKDLLPNPPKTWEEIPALDKELKAKGKSALMFNLQEPYFT--WPLIAADGGYAFKYAAGKYDIKDVGVDNAGAKAGPNKELAKEFLENYLLTDEGLEAVNKDKPLGAVALKSYEEELVKDPRVAATMENAQKGEIMPNIPQMSAFWYAVRTAVINAASGRQTVDAALAAAQTNAAAGTCEECSIDEDCKSNNGRWHCQCKQDFNITDISLLEHRLECGANDMKVSLGKNRDWVSVVTPARDGPCGTVLTRNETHATYSNFACSYPLDMKVSLKTALQPMVSALNIRVGGTGMFTVRMALFQTYTQPYYVGTMLDIIQDRCPHTRDSTIQVVENGESSQGRFSVQMFRFAGNYDLVYLHCEVYLCDTM |
3 | 2nbiA | 0.13 | 0.12 | 4.35 | 1.25 | MUSTER | | DLNPSSQPSECADVLEECPIDECFLPYSDASRPPSCLSFGRPDCDVLP----TPQNINCPRCCATECRPDNPMFTPSPDGSPPICSPTMLPTNQPTPPEPSSAPSDCGEVIEECPLDTCFLPTSDPARPPDCTAVGRPDCDVLPFPPACCPFECSPDNPMFTPSPDGSPPNCSPTMLPTPQPSTPTVITSPAPSSQPSQCAEVIEQCPIDECFLPYGDSSRPLDCTDPAVNRPDCDVLPTPQCAFECRPDNPMFTPSPDGSPPICSPTMMPSPEPSSQPSDCGEVIEECPIDACFLPKSDSARPPDRPDCNVLPFPNNIGCPSCCPFECSPDNPPSPDGSPPNCSPTMLPSPSPSAVTVPLTPAPSSAPTRQPSSQPTGPQPSSQPSECADV------LELCPYDTCFLPFDDSSRPPDCTDPSVNRPDCDKLSTAIDFTCPTCCPTQDNPMFSPSPDGSPPVC |
4 | 5cxcA | 0.07 | 0.05 | 1.86 | 0.75 | CEthreader | | ANSSAAVQPGQERVLSASYDGLLRIWNASGSVIATSPSGSHGGHTASIKAAKFLTSDRLASAGMDRTVRVWKYTESDHFTGELKPTLELYGHTGSVDWLDVDGHSKHILTASADGAIGKASAPEPDASLLPGTSSVSGLWSIHTAPATAAIFDPRDRTVAYSASQDHTVSTLTLTHPLLSLSALTRTTSPLLAAGTSARHIMTLRGHANKVVSLSPSPENEYSLVSGSHDGTCRVWDLRSVRPATKEEGGVSEPVYVIERESWKRPVAGDGCKVFSVVWDKLGIFSGGEDKKVQVNRG---------------------------------------------------------------------------------------------------------------------------------------------------------------------- |
5 | 4ui9X | 0.08 | 0.08 | 3.19 | 0.75 | EigenThreader | | ------NVIDHVRDMAAAGLSLLLTLSNNNPELFSPPQKYQLLVYHADSLFHDKEYRNAVSKYTMALQQKKALLPSEIEVKYKLAECYTVLKQDKDAIAILDGIPSRQRTMMLANLYKKAGQVTSYKEVLRQCPLALDAILGLLSLSVKGAEVPNLDWLSVWIKAYAFVHTGDNSRAISTICSLEKKSLLRDNVDLLGSLADLYFRAGDNKNSVLKFEQAQMLDPYLIKGMDVYGYLLAREGRLEDVENLGCRLFNISDQHAEPWVVSGCHSFYSKRYSRALYLGAKAIQLNSN----SVQALLLKGAALRNMGRVQEAIIHFREAIRLAPCRLDCYEGLIECYLASNSIREAMVMANNVYKTLGANAQTLTLLATVCLEDPVTQEKAKTLLNKALTQEPDYIKAVVKKAELLSREQKYEDGIALLRNALANQSDCVLHRILGDFLVAVNEYQEAMDQYSIALS |
6 | 1w0sA | 0.08 | 0.07 | 2.63 | 0.66 | FFAS-3D | | --------------------------------------DPV----LCFT-QYEESSGKCKGLLWAPCSVTCSEGSQLRYRRCVGWNGQCSGKVAPGTLEWQLQACEDQQC----------CPEMGGWSGWGPWEPCSVTCS---------KGTRTRRRACNHP--------APKCGGHCPGQAQESEACDTQQVCPTHGAWATWGPWTPCSASCHGGPHEPKETRSRKCSAPEPSQKPPGKPCPGLAYEQRRCTGLPPCPVAGGWGPWGPVSPCPVTCGLGQTMEQRTCNHPVPQHGGPFCAGDATRTHICNTAVPCPVDGEWDSWGEWSPCIRRNMKSISCQEIPGQQSRGRTCRGRKFDGHRCAGQQQDIRHCYSIQHCPLKGSWS-----------EWSTWGARQRLCTPLLPKYPPTVSMVEGQGEKNVTFWGRPLPRCEELQEEKRPCLHVPACKDEEE |
7 | 6rlbD | 0.10 | 0.08 | 2.89 | 1.42 | SPARKS-K | | ---------------------------------------------------IRWETKSCQTASIATASASAQARNHVDAQVQTEAPVPVSVQPPSQYDIPRLAAFLRRVEAMVIRELNKNWQSHAFDGFEVNWTEQQQMVSCLYTLGYPISWNSTGSVVACAYGRLDHGDWSTLKSFCAWNLDRRDLRPQQPSAVVEVPSAVLCLAFHPTQPSHVARLEDPLLWRTGLTDDTHTDPVSRFQVLSVATDGKVLGVGQLQLTKLKKHPRGETEVGATSSFDEGGFPLKCSLAPAQFTFIYSVSCSPFHRNLFLSAGSMLQAPPLTSLQLSLKYLFAVRWSPVRPLVFAAASGQKSSQKPTVLIKQTQDESPVYCLEFNSQQTQLLAAGDAQGTV--------------KVWQLSTEFTEQGPREAEDLDCLAAEV------------------------------- |
8 | 6yejA | 0.05 | 0.03 | 1.65 | 0.67 | DEthreader | | DNHLTICENVAKVKALMDSNLPLVRPQCS-N-QH--RTQYFYSLLTLYVPLLQVS-----PSA-EQLVQVYELT-HH--QH--Q---------------D--HN-VTGALELLQ--FL-TLTAVGGIGQLTA--STDDAPLHCVCVAAVAPCGTLICSILSR---------------TAVRNCVMSTLEIFKLQERV-LN-VVIHL---------------------DPRVRHVAAASLIALLSTAPVILAGN-LAMVEQLFSHLLVFSALDVEPMMATLY-TTCVQL--KQVLDLLAQLVQLRVN-----VQITSLVLSGNPAVSC-ESMSYKLGQVSIV------TPILISDILAYLVPAGALHLVMCAAFICGV---------------SEESTPSIIYHCAL-----------------LSRLDAES-L-KLSVLMCMVAMLDFFPPQDMDWVML----- |
9 | 6iabA | 0.06 | 0.06 | 2.50 | 1.21 | MapAlign | | ----DLIKDIDRFVNGFELNELEPKFVMGFGGIRNAVNQSINIDKETNHMYSTQSFWINKLTPSGDLISSMRIVYKDNYVLDLEEAKGLTDYTPQSLLNKHTFTPLIDEANDKLILRFGDGTIQVRSRADVKNHIDNVEKEMTIDNRWMQGIAVDGDDLYWLSGNSSVNSHVQIGKYSLTTGQKIYDYPFKLSYQDGINFPRDNFKEPEGICIYTNPKTKRKSLLLAMTNGHNLYGFFQLGEYEHFEALRARGSQNYKLTKDDGRALSIPDHIDDLNDLLKNMPMNGSKRIIDAGCFINVYPTTQTLGTVQELTRFSTGRKMVKMVRGMTLDVFTLKWDYGLWTTIKTDAPYQEYLEASQYNNWIAYVTTAGEYYITGNQMEAPEEIKKVGAWLRVSGNAVGEVRQTLEANISEYKEFFSNVNAETKHREYGWVAKH--------------------------- |
10 | 1zvoC | 0.10 | 0.10 | 3.71 | 1.14 | MUSTER | | LQESGPGLVKPSETLS--IVSGGPIRRTGYRQPPGKGLEWIGGVYYTGSIYYNPSLR-------GRVTISVDTSRNQFSLNLRSMSAADGNPPPYYDIGTGSDDGIDVWGQGTTVHVSSAPTKAPDVFPIISGCRHPKDNSPVVTGYHPTSVTVTWYMGTQSQPQRTFPEIQRRDSYYMTSSQLSTPLQQWRTASKSKKEIFRWPESPKAQASSVPTAQPQAEGSLAKATTAPATTRNTGRGGEEKKKEKEKEEQEERETKTPECPSHTQPLGVYLLTPAVQDLWLRDKATFTCFVVGSDLKDAHKVPTGGVEEGLLERHSNGSQSQHSRLTLPRSLWNAGTSNHPSLPPQRLMALREPAAQAPVKLSLNLLASSDPPEAASWVSGFSPPNILLMWLEDQREVNTSGFAPARPPPQPGSTTFWAWSVPAPPSPQPAEDSRTLLN---ASRSLEVSYVTDHGPM- |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Download alignment lists the threading program used to identify the template, and provide the 3D structure of aligned regions of threading templates (threading[1-10].pdb.gz). |
(f) | Template residues identical to query sequence are highlighted in color. |
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