Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Downloadalignment | | 20 40 60 80 100 120 140 160 180 200 220 240 260 280 300
| | | | | | | | | | | | | | | |
| SS Seq | CCCCCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCSSSSSHCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC MLLSPVTSTPFSVKDILRLERERSCPAASPHPRVRKSPENFQYLRMDAEPRGSEVHNAGGGGGDRKLDGSEPPGGPCEAVLEMDAERMGEPQPGLNAASPLGGGTRVPERGVGNSGDSVRGGRSEQPKARQRRKPRVLFSQAQVLALERRFKQQRYLSAPEREHLASALQLTSTQVKIWFQNRRYKCKRQRQDKSLELAGHPLTPRRVAVPVLVRDGKPCLGPGPGAPAFPSPYSAAVSPYSCYGGYSGAPYGAGYGTCYAGAPSGPAPHTPLASAGFGHGGQNATPQGHLAATLQGVRAW |
1 | 6ezoI | 0.07 | 0.07 | 2.88 | 1.15 | SPARKS-K | | SKDQPRVLLPLALIDYTLEFLTATGVQCWKAAQIKEHLLKSKWCRPTSLNVVRIITSELYRSLGDLVRSDINITRALEEHRLRRKLEKNESSPSHPTRCHEDNVVVAVDSTTNQGLRRFAFPLSLFQGSSDGVEVRSICSPQVAQLFTD--NFDYQTRDDFVRGLLVNEEILGNQIHMGARVSNLHMYSAVCADVIRRWVYPLTPHSRHNIYRGPEVSLGHGSILEENVLLGSGTVIGSNCFITNSVIGPGCHIGDNVVLDQTGVRVAAGAQIHQSLLCDNAEVKERVTLKPRSVLTSQVV |
2 | 2l9rA | 0.61 | 0.12 | 3.52 | 1.10 | CNFpred | | ----------------------------------------------------------------------------------------------------------------------------------------SHMSHTQVIELERKFSHQKYLSAPERAHLAKNLKLTETQVKIWFQNRRYKTKRKQLSSELG-------------------------------------------------------------------------------------------------------- |
3 | 2hqaA | 0.05 | 0.05 | 2.32 | 1.13 | MapAlign | | VHSDYSIDGLAKTAPLVKKAAALGPALAITDFTNLCGLVKFYGAGHGAGIKPIVGADFNVQCDLLGDELTHLTVLAANNTGYQNLT-----LLISKAYQRGYGAAGPIIDRDWLIELNEGLILLSGGRGDVGRSLLRGNSALVDECVAFYEEHDEESYLHAAVELAEARGLPVVATNDVRFIDSSDFDAHEIRVAIHDYGRDAVSQIITFGTAAKAVIRDVIDARKLEGVTRNAGKHAGGVVIAPTKITDFAPLYCDEEGKHPVTQILPPDINSGLYHFHVNDDGEIVYGIGAIKGVGE-- |
4 | 2cufA | 0.25 | 0.07 | 2.06 | 1.47 | HHsearch | | -----------------------------------------------------------------------------------------------------------------------------GSSGSSGRGSRFTWRKECLAVMESYFNENQYPDEAKREEIANACRVTSLKVYNWFANRRKEIKRRANIAAILESGPSSG------------------------------------------------------------------------------------------------- |
5 | 5kzwA1 | 0.07 | 0.07 | 2.79 | 0.67 | CEthreader | | YLALEDGGSAHGVFLLNSNAMDVVLQPSPALSWRSTGGILDVYIFLGPEPKSVVQQYLDVVGYPFMGYSSTAITRQVVENMTRAHFPLDVQWNDLDYMDSRRDFTFNKDGFRDFPAMVQELHQGGRRYMMIVDPAISSSGPAGSYRPYDEGLRRGVFITNETGQPLIGKVWPGSTAFPDFTNPTALAWWEDMVAEFHDQNEPSNFIRGSEDGCPNNELENPPYVPGVVGGTLQAATICASSHQFLSTHYNLHNLYGLTEAIASHRALVKARGTRPFVISRSTFAGHGRYAGHWTGDVWSSW |
6 | 3zgqA | 0.07 | 0.07 | 2.97 | 0.67 | EigenThreader | | QLEEAQKYTGKIGNVCKKLYYQKAKAAFEKALEVENPEFNIGYAITVYRLDDVKSFSLGPLRKAVTLNPDNSYIKVFLALKLQDVHAEAEGEKYIEEILDQISSQPYVLRYAAKFYRRKNSWNKALELLKKALEVTPTSSFLHHQMGLCYKKATHNRPKIFHFKAAMERDSMFAFAYTDLANMYAEGNAEDIFRKALRLENITDDHKHQIHYHYGRFQEFHRKSENTAIHHYLEALKVKDRSPLRTKLTSALKKLSTKRLCHNALDVQSLSALGFVYKLEGEKRQAAEYYEKAQKIDPENA |
7 | 1pufA | 0.39 | 0.10 | 2.94 | 0.98 | FFAS-3D | | -----------------------------------------------------------------------------------------------------------------------NNPAANWLHARSTRKKRCPYTKHQTLELEKEFLFNMYLTRDRRYEVARLLNLTERQVKIWFQNRRMKMKKINKDRA---------------------------------------------------------------------------------------------------------- |
8 | 5jcss | 0.07 | 0.07 | 2.88 | 1.09 | SPARKS-K | | AQKFPILTNLIPKLDSYKNVKSIYMNTKFISLNKGAHTRVVSVRDLIKLCERLDILFKNNGINKPDQLIQSSVYDSFSEAADCFAGAIGEFKADIASSRISLFLTQHVPTLENLDDSIKIKLNIQKKSMNSTLFAFTNHSLRLMEQISVCIQMTEPVKTTVVQQLAKMLAKKLTVINVLFNATFSLKKNEKFHKMLHRCFNKNQWKNVVKLWNYKMAQSILKITNTENENENAKKKKRRLNTHEKKLLLDKWADFNDSVKKSLVKTIRAGEWLLLDEVNLASDLLTEPDSRSILLDAEPIK |
9 | 2dmtA | 0.41 | 0.11 | 3.23 | 1.09 | CNFpred | | -------------------------------------------------------------------------------------------------------------------GSSGSSGGEPGTKAKKGRRSRTVFTELQLMGLEKRFEKQKYLSTPDRIDLAESLGLSQLQVKTWYQNRRMKWKKSGPSSG---------------------------------------------------------------------------------------------------------- |
10 | 5d06A | 0.08 | 0.05 | 2.14 | 0.67 | DEthreader | | A------------------H-RTLLLRLPVTSCSYGQG-VLTLPSL---PVYTVKLAIPAGTGLIWTNKFYCFYRKFYFVVLPI---FIPLNSIAKYNMVERLEHNINSKVKTLL---HHDGQY-IT-F--HRTNAKNIDDSLDHFIRSGAIKATLLAVDLRMERIKQLPSLVPSFALGIYGCCRLRAMQLMSD-----------LA----------------------------RDVFISLR----EEAKHILAFA----LLDAGPYAAFVILCFVLQL-QMVVAP------AWTGC-L- |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Download alignment lists the threading program used to identify the template, and provide the 3D structure of aligned regions of threading templates (threading[1-10].pdb.gz). |
(f) | Template residues identical to query sequence are highlighted in color. |
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