Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Downloadalignment | | 20 40 60 80 100 120 140 160 180 200 220 240 260 280 300 320 340 360 380 400 420 440 460 480
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| SS Seq | CSSSCCCCCCCCCCCCCCCCCCCCCHHHHHCCCCCHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHCHHHHHHHCCCCCCCCCCCCHHHHHHHHCCHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHCCHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHCCHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHCCHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHCCCHHHHHHHHHHCCCCCCCCCCCCCHHHCHHHHHHHHHHHHCCHHHHHHHCCCCCCCCHHHCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCCCCCCCCHHHHCCCCCCCCCCCCCSCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC MVLLAGTGPEGGGARCMTPPPPSPPRGAQVEEDPADYEEFEDFSSLPDTRSIASDDSFYPFEDEEEHGVESAESVPEGVPESVPETATLLRAACANNVGLLRTLVRRGVSVEEAQETDRNGRTGLIVACYHGFVDTVVALAECPHVDVNWQDSEGNTALITAAQAGHAIITNYLLNYFPGLDLERRNAFGFTALMKAAMQGRTDCIRALMLAGADVHARDPRRGMSPQEWATYTGRVDAVRLMQRLLERPCPEQFWEKYRPELPPPPEAARKPAGSKNCLQRLTDCVLSVLTPRSVRGPEDGGVLDHMVRMTTSLYSPAVAIVCQTVCPESPPSVGKRRLAVQEILAARAARGPQAQEEDEVGGAGQRGRTGQEDADSREGSPRAGLPPALGSRGPAAPAPRKASLLPLQRLRRRSVRPGVVVPRVRVSKAPAPTFQPERPARKGSTKDSGHLQIPKWRYKEAKEEKRKAEEAEKKRQAEAQKERRTAPWKKRT |
1 | 6molA | 0.17 | 0.15 | 4.95 | 0.36 | CEthreader | | --------------------DLGKKLLKAARAGQDDEVRILMANGADVNATDIWDATPLALIGHLEIVEVLLKNGADVNASDITGTTPLHLAATMGHLEIVEVLLKYGA---DVNAYDLNGATPLHLAARMGHVEIVEVLLKY-GADVNAQDAAGGTPLHEAARAGHLEIVEVLLKY--GADVNAVDAAGGTPLHEAARAGHLEIVEVLLKYGADVNAVDA-AGGTPLHEAARAGHLEIVEVLLKYGADVNAVDAAGGTPLHEAARLEIVEVLLKYGADVNAVDAAGGTPLHEAARAGHLEIVEVLLKYGADVNAVGTPLHKAARAGHLEIVEVLLKYGADVN-ATDIWDATPLHLAALIGHLEIVEVLLKNGADVNASDITGTTPLHLAATMGHLEIVEVLLKYGADVNAYDLNGATPLHLAARMGHVEIVEVLLKYGADVNAQDKFGKTAFDISIDNGNEDLAEILQAAALE-------------------- |
2 | 4o1oA | 0.13 | 0.12 | 4.07 | 1.18 | EigenThreader | | ----------SLEEMLTQAVQEAD-----------IEQVRQLLERGADANFQEEEWGWSPLHSAVQMDSLLLKHGADPCLRKRNGATPFIIAGITGNVRLLQLLLPNVEDV---NECDVNGFTAFMEAAVYGRVEALRFLYENGADVNMHRKTGGATALMDAAEKGHVGVVTILLHA-MKAEVDARDNMGRNALVYALLGKAKAITRLLLDHGADVNVRGEGS-KTPLILAVERKNLDLVQMLLEQEQIEVN------DTDREGKTALLLAVELRL-----EEIAKLLCHRGASTNCGD---LVAIARRNY---DSDLVKFLRLHNWRGDAVPNEEDESARNILSSLFKAIGELHRSGYSHQDLQPQNGLLVLYVVKKGDISFETLKNQSFEEVIQGSPDEETRDLIHHLFHPEDLAHPFFWSR-------NQNSRILQLLQPGTLSTSFAQWTTKIDSFVMEEMNAKFIRNLGEHIKNKKMKSIIGEPSQYFQ |
3 | 6fesA1 | 0.31 | 0.12 | 3.48 | 1.48 | FFAS-3D | | --------------------------------------------------------------------------------------KKLLEAARAGQDDEVRILLANGAD---VNTADETGFTPLHLAAWEGHLGIVEVLLK-NGADVNANDERGHTPLHLAAYTGHLEIVEVLLK--NGAGVNATDVIGTAPLHLAAMWGHEEIVEVLLKNGADARAQD-KFGKTPEDLARDNGYESVARLARKEIIRAVVDEL---------------------KELIQNVNDDIKEV-----EKNPED------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- |
4 | 6lbgB | 0.16 | 0.12 | 4.04 | 1.27 | SPARKS-K | | ----------------------DLKTAVFNAARDGKLRLLTKLLA----------------SKSKEEVSSLISEK-------TNGATPLLMAARYGHLDMVEFLLEQCIEVGNFDGETIEGAPPLWAASAAGHLKVVQSLLNH-GASVNNTTLTNSTPLRAACFDGHLEIVKYLVEH--KADLEVSNRHGHTCLMISCYKGHKEIAQYLLEKGADVNRKS-VKGNTALHDCAESGSLDIMKMLLMYCAKM------EKDGYGMTPLLSASVTG--HTNIVDFLTH-------HAQTSKTERINALELLGATFVDKKRDL--------------------LGALKYWKKAMNMRYSDRTNII------SKPVPQTLIMAYDYAKEVNSAEELEGLIADPDEMRMQALLIRERILGPSHPDTSYYIRYRGAVYADSGNFKRCINLWKYALDMQQSNLLSFAELFRFSR---------------------------- |
5 | 6fesA | 0.26 | 0.12 | 3.69 | 1.68 | CNFpred | | ----------------------------------------------------------------------------------SDLGKKLLEAARAGQDDEVRILLANGA---DVNTADETGFTPLHLAAWEGHLGIVEVLLK-NGADVNANDERGHTPLHLAAYTGHLEIVEVLLKN--GAGVNATDVIGTAPLHLAAMWGHEEIVEVLLKNGADARAQDK-FGKTPEDLARDNGYESVARLARKEIIRAVVDELKELIQNVNDDIKEVEKNP-EDMEYWNKIYRLVH------------------TMKEITETMGFSPVALVLEA------------IMMLVKLMLNS------------------------------------------------------------------------------------------------------------------------------------------------- |
6 | 6z2wE | 0.07 | 0.05 | 1.96 | 0.83 | DEthreader | | ACLESEKFSLVRINPNRPEA----------------A-GKSEIFRI-------------LHSNFLSH--------EFSESLLSGILFSLHRIFSHFQPPKLTDQINKKLVQKCFMNNRYLRLLSTRIIPLFNISNHTATLIKFQSQKLPVKEN-LVIAWTQLTLTTSNDVFDTLLLKLIDIFNSDDYSLRIMMTLQIKNATPQLLSPILPVLLRQLNLVERKVGFQNLIELLGYSSKTILDIFQRYIIPYQAVALVKHGLFSLDILET--L---------YITAYLPD--Y-----------KTLAEITKLMILCSLRFLITNFQKKLQD-I-INGSFLIAPSIISALAQ-----------K---L---VINDILVPAF-WQSENKQLFVALVESKLAQSV--SL--EDDGSL-LDSRMYERSLSLQLLFATGNL----------------------------------------------------------- |
7 | 5aq7A | 0.17 | 0.12 | 3.94 | 0.66 | MapAlign | | ------------------------------------------------------------------------------------LGKKLLEAARAGQDDEVRILLANGA---DVNTADETGFTPLHLAAWEGHLGIVEVLLKN-GADVNANDERGHTPLHLAAYTGHLEIVEVLLKNG--AGVNATDVIGTAPLHLAAMWGYKEIVEVLLKAGADVDAQDKF-GKRPLWLAADQGHAEIAAKLVAARGYIELDNSGKILESVRSEERFPMMSTFKVLLAGAILSRIDGMTVRELASAAITMSDNTAANLLLTTIGGPKGLTAFLHNMGDHVTRLDTTTPVAMATTLRKLLTGELLTPASRQQLMDWMEADKVAGPLLRSVLPAGWFIADKSGAGERGSRGIVAA-----------------------------------------LGPDGKPSRIVVIYTTGSQATMDILNEAIAMLGRAMIEK---------- |
8 | 6molA | 0.21 | 0.18 | 5.84 | 1.20 | MUSTER | | ILMANGADVNATDIWDATPLHLAALIGH--------LEIVEVLLKNGADVNASDITGTTPLHLAATMGHLEILKYGADVNAYDLGATPLHLAARMGHVEIVEVLLKYGAD---VNAQDAAGGTPLHEAARAGHLEIVEVLLKY-GADVNAVDAAGGTPLHEAARAGHLEIVEVLLKY--GADVNAVDAAGGTPLHEAARAGHLEIVEVLLKYGADVNAVD-AAGGTPLHEAARAGHLEIVEVLLKYGADVNA-----VDAAGGTPLHEAARA--GHLEIVEVLLKYGADVNAVGTPHKAARAGH-LEIVEVLLKYGADVNATDIWDATPLHLAALIGHLEIVEVLLKNGAD----------VNASDITGTTPLHLAA---TMGHLEIVEVLLKYGADVNAYDLNGATPLHLAARMG---HVEIVEVLLKYGADVNAQDKFGK-----------------AFDISIDNGNEDLAEILQAAALE------------ |
9 | 4oauC | 0.15 | 0.11 | 3.84 | 1.00 | HHsearch | | ------------------------------------------------------------------------------------DNHLLIKAVQNEDVDLVQQLLEGGAN---VNFQEEGGWTPLHNAVQMSREDIVELLLR-HGADPVLRKKNGATPFILAAIAGSVKLLKLFLSK--GADVNECDFYGFTAFMEAAVYGKVKALKFLYKRGANVNLRRKKGGATALMDAAEKGHVEVLKILLEMGADVNA---CDNM--GRNALI--HALLSSDEAITHLLLDHGRGERGKTPLILAVEKKHLG-LVQRLLEEHIEINDTDSDGKTALLLTARRNYDHSLVKVLLSHGAKEDFHPP---AEDWKPQSSHWGAADLHRIYRPIGKLKFFI-DE---KYKIADTSEGGIYLGFYE---KQEVAVKTFCEGSPNSHLVTF--YGSESHRGHLFVCVTLCEQEACLDVHRGERNVLSSIFKAVQELHLSCGYTHQD |
10 | 5vkqA | 0.12 | 0.12 | 4.16 | 0.34 | CEthreader | | GADVGARNNDNYNVLHIAAMYSREDVVKLLLTKRGVDPFSTGGSRSQTAVHLVSSRQTGTATNILRA-LLAAAGKDIRLKADGRGKIPLLLAVESGNQSMCRELLAAQT-AEQLKATTANGDTALHLAARRRDVDMVRILVDYG-TNVDTQNGEGQTPLHIAAAEGDEALLKYFYGV--RASASIADNQDRTPMHLAAENGHAHVIEILADKFKASIFERTKDGSTLMHIASLNGHAECATMLFKKGVYLHMPNKDGARKVDVTTNDNYTALHIAVESAKPAVVETLLGFGADVHVRGGKLRETPLHIAARVKDGDRCALMLLKSGASPNLTTDDCLTPVAARHGNLATLMQLLEDEGDPLYKSNTGETPLHMACRACHPDIVRHLIETVKEKHGPDKATTYINSVNEDGATALHYTCQITKEEVKIPESDKQIVRMLLENGADVTLQTKTALETAFHYCAVAGNNDVLMEMISHMNPTDIQKAMNRQSSVGWT |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Download alignment lists the threading program used to identify the template, and provide the 3D structure of aligned regions of threading templates (threading[1-10].pdb.gz). |
(f) | Template residues identical to query sequence are highlighted in color. |
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