Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Downloadalignment | | 20 40 60 80 100 120 140 160 180 200 220
| | | | | | | | | | | |
| SS Seq | CCCCCCCHHHHHHHHHHCCHHHHHHHHHHHCCCSSSSCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCCCSSSSSCHHHHHHCCCCSSSSSSCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHCCCCCCCCHHHHHHHHHHHCCCSSSSSCCCCCC MKITHPAGCMSQFIKFFGEQILILWKFALLRKRILIFSPPPVGVVCYRVYCCCCLANVSLPGIGGTIPESKPFFYVNVADIESLEVEVSYVACTTEKIFEEKRELYDVYVDNQNVKTHHDHLQPLLKINSADREKYRRLNEQRQMLLYSQEVEEDYNPCEEDLFVLFFLEQNNRIFQTLLEVSASQDKTLTAEHARGMGLDPQGDRSFLLDLLEAYGIDVMLVIDNPCCP |
1 | 6lt0B | 0.08 | 0.06 | 2.45 | 1.00 | DEthreader | | ---KRAGQNALKFIRQY-PFAHPAIYSLLSGRTLVVLG-EDEAIVRKLVTALAIFV--PS--Y--GCYAKPVKHWASSP-LHIMDFQKWKLIGLQRGTLHALSYSYTSILDLNKTLRC---PL--YRGT-LVPRLAD-HRTQI--K------------R-GSTYYLHVQSMLTQLCSKAFLYTFCHHLRQMSFLKLTLGLVN-EDVRVVQYLAELLKLYM---------- |
2 | 6ekkA | 0.13 | 0.11 | 3.94 | 0.99 | SPARKS-K | | LPSIPENRNLTEYFVAVDNNMLHLYASMLYERRILIICSK-LSTLTACIHGSAAMLYPMYW-----QHVYIPV--LPPHLLDYCCAPMPYLIGIHLSLMEKVDDVVILNVDTNTLETPFDDLQSL------PNDVISSLKNRLKK--------VSTTTGD--GVARAFLKAQAAFFGSYRNALKEEPITFCEEAFVS-HYRSGAMRQFLQNATQLQLFKQFIDGRLDLLN |
3 | 6ekkA | 0.11 | 0.10 | 3.58 | 1.18 | MapAlign | | LPSIPENRNLTEYFVAVVNNMLHLYASMLYERRILIIC-SKLSTLTACIHGSAAML-------YPMYWQHVYIPVLPPHLLDYCCAPMPYLIGIHLSLMEKVMALDVVILNVNTLETP------FDDLQSLPNDVISSLKNRLK----------KVSTTTGDGVARAFLKAQAAFFGSYRNALKIEPITFCEEAFVSH-YRSGAMRQFLQNATQLQLFKQFILDLLNS-- |
4 | 6ekkA | 0.09 | 0.08 | 3.14 | 1.26 | CEthreader | | LPSIPENRNLTEYFVAVVNNMLHLYASMLYERRILIICSK-LSTLTACIHGSAAMLYP-------MYWQHVYIPVLPPHLLDYCCAPMPYLIGIHLSLMEKVRNMDVVILNVDTNTLETPFDDLQSLPNDVISSLKNRLKKVSTTTG----------DGVARAFLKAQAAFFGSYRNALKIEPEEPITFCEEAFVSH--YRSGAMRQFLQNATQLQLFKQFIDGRLDLLN |
5 | 6ekkA | 0.16 | 0.14 | 4.63 | 0.65 | MUSTER | | LPSIPENRNLTEYFVAVDVNMLHLYASMLYERRILIICSK-LSTLTACIHGSAAM---------YPMYWQHVYIVLPPHLLDYCCAPMPYLIGIHLSLMEKVRALDDVILNVDTLETPFDDLQSL------PNDVISSLKNRLKK----------VSTTTGDGVARAFLKAQAAFFGSYRNAKIEPEEPITEEAFVS-HYRSGAMRQFLQNATQ---IDGRLDLLNSGEG |
6 | 6ekkA | 0.15 | 0.13 | 4.41 | 2.00 | HHsearch | | LPSIPENRNLTEYFVAVDNNMLHLYASMLYERRILIICSK-LSTLTACIHG--SAAMLYPM----YWQVYIPVLPP--HLLDYCCAPMPYLIGIHLSLMEKVRALDDVILNTNTLETPFDDLQ---SLPNDVISSLKNRLKK---------VSTTTG----DGVARAFLKAQAAFFGSYRNALKIEPITFCEEAFVSHYRS-GAMRQFLQNATQLQLFKQFIDGRNSGSD |
7 | 6ekkA | 0.13 | 0.10 | 3.63 | 1.04 | FFAS-3D | | ------NRNLTEYFVAVDVNMLHLYASMLYERRILIICSK-LSTLTACIHGSAAM--------------LYPMYWLPPHLLDYCCAPMPYLIGIHLSLMEKVRNMAVVILNVDTNTLETPFDDLQSLPNDVISSLKNRLK--------------KVSTTTGDGVARAFLKAQAAFFGSYRNAEPEEPITFCEEAFVS-HYRSGAMRQFLQNATQLQLFKQFI-------- |
8 | 1j7kA | 0.07 | 0.07 | 2.64 | 0.85 | EigenThreader | | LRPKSLDEFENVKKKLSL----ALEAAKMRLDHVLLAGPPGL-GKTTLAHIIASELQTNPVLVKSLERGDVLFIDEIKAVEELLYQPFTLVGATTRPLRS----RFGIILEL---DFYTAAEMIAKRSRGRIAIRLTKRVRDMLTVVK-------ADRINTDIVLKTMEVLNFDRKILKTIIEIYRGGPVGLNALAASLGVESEVPYLLQAKAYKHLKYEVP-------- |
9 | 3kx4A | 0.13 | 0.11 | 3.89 | 0.60 | CNFpred | | ------------VPEDMTRLTLDTIGLCGFNYRFNSFYRDQPHPFITSMVRALDEAMNKLQRANPDDPAYDENKRQFQEDIKVMND-------LVDKIIADREQSDDLLTHMLNGKDPE----TGEPLDDENIRYQIITFLIAGHETTSG----------LLSFALYFLVKNPHVLQKAAEEAARVDPVPSYKQVKQL----KYVGMVLNEALRLWPPAFSLYAKEDTVL |
10 | 6ekkA | 0.11 | 0.09 | 3.17 | 1.00 | DEthreader | | -QPNRNLTEYFVA--VDVNNMLHLYASMLYERRILIIC-SKLSTLTACIHGSAAML-YPM------YWQHVYIPVLPPHLLDYCCAPMPYLIGILMEKVRNMALDDVVILNVTNTLETP-F-DDLQSLPNDVISSLKNRLKK-VST------------TTGDGVARAFLKAQAAFFGSYRNALKFCEEAFVSHYRS--GAMRQ-FLQNATQLQLFKQID----------- |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Download alignment lists the threading program used to identify the template, and provide the 3D structure of aligned regions of threading templates (threading[1-10].pdb.gz). |
(f) | Template residues identical to query sequence are highlighted in color. |
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