Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Downloadalignment | | 20 40 60 80 100 120 140 160
| | | | | | | | |
| SS Seq | CCCCHHHHCCCCCCSSSCCCCSCCCCCHHHHCCCCCCSSSCCCCCCCCCCHHHHCCCCCCSSSCCCCCCCCCCCCCHHHCCCCCCCSSSCCCCSCCCCCHHHHCCCCCCSSSCCCCCCCCCCHHHHCCCCCCSSSCCCCCCCCCCHHHHCCCCCCSSSCCCCCC ETFPRELCTLENLQVLDLSENQLQKISSDICNLKGIQKLNFSSNQFIHFPIELCQLQSLEQLNISQIKGRKLTRLPGELSNMTQLKELDISNNAIREIPRNIGELRNLVSLHAYNNQISYLPPSLLSLNDLQQLNLSGNNLTALPSAIYNIFSLKEINFDDNPL |
1 | 4u08A | 0.35 | 0.35 | 10.37 | 1.50 | DEthreader | | LALPEEIGQLQNLQKLKLYENQLTAIPKEIGQLQNLQELNLAHNQLATLPEDIEQLQRLQTLYLGHN--Q-FNSILKEIGQLQNLESLGLDHNQLNVLPKEIGQLRNLESLGLDHNQLNVLPKEIGQLQNLQILHLRNNQLTTLPKEIGQLQNLQKLLLNKNKL |
2 | 4u09A2 | 0.37 | 0.37 | 10.86 | 2.51 | SPARKS-K | | TSLPKEIEQLQNLKTLNLGENRFQIFPVEILELKNLLELNLYYNQLVEFPKEVGQLKSLKYLSLYHNQ---ITTLPVEVTQLPDLQELHLSGNKITILPKEILQLKNLEWLSLSNNKLNALPKEIGQLKKLQRLELGNNQLTTLPKEIEQLKNLQRLELDSNPI |
3 | 4mn8A | 0.28 | 0.27 | 8.40 | 0.50 | MapAlign | | GDVPEEICKTSSLVLIGFDYNNLTKIPECLGDLVHLQMFVAAGNHLTGIPVSIGTLANLTDLDLSGN--QLTGKIPRDFGNLLNLQSLVLTENLLEGIPAEIGNCSSLVQLELYDNQLTGIPAELGNLVQLQALRIYKNKLTSIPSSLFRLTQLTHLGLSENHL |
4 | 4mn8A | 0.28 | 0.27 | 8.40 | 0.33 | CEthreader | | GDVPEEICKTSSLVLIGFDYNNLGKIPECLGDLVHLQMFVAAGNHLTSIPVSIGTLANLTDLDLSGN--QLTGKIPRDFGNLLNLQSLVLTENLLEDIPAEIGNCSSLVQLELYDNQLTGIPAELGNLVQLQALRIYKNKLTSIPSSLFRLTQLTHLGLSENHL |
5 | 4u08A | 0.39 | 0.38 | 11.35 | 1.86 | MUSTER | | TTLPKEIGQLQNLQKLLLNKNKLTTLPKEIGQLQNLQKLKLYENQLTTLPKEIGQLQNLQELDLD---GNQLTTLPENIGQLQRLQTLYLGNNQLNFLPKEIGQLRNLESLDLEHNQLNALPKEIGKLQKLQTLNLKYNQLATLPEEIKQLKNLKKLYLHNNPL |
6 | 6g9lA | 0.33 | 0.32 | 9.71 | 0.80 | HHsearch | | ERIPHSIFSLHNLQEIDLKDNNLKTIEESFQHLHRLTCLKLWYNHIAYIPIQIGNLTNLERLYLNR---NKIEKIPTQLFYCRKLRYLDLSHNNLTFLPADIGLLQNLQNLAVTANRIEALPPELFQCRKLRALHLGNNVLQSLPSRVGELTNLTQIELRGNRL |
7 | 4u09A2 | 0.37 | 0.36 | 10.70 | 2.00 | FFAS-3D | | TSLPKEIEQLQNLKTLNLGENRFQIFPVEILELKNLLELNLYYNQLVEFPKEVGQLKSLKYLSLYHNQITT---LPVEVTQLPDLQELHLSGNKITILPKEILQLKNLEWLSLSNNKLNALPKEIGQLKKLQRLELGNNQLTTLPKEIEQLKNLQRLELDSNPI |
8 | 6g9lA | 0.33 | 0.32 | 9.71 | 0.72 | EigenThreader | | ERIPHSIFSLHNLQEIDLKDNNLKTIIISFQHLHRLTCLKLWYNHIAYIPIQIGNLTNLERLYLNRNK---IEKIPTQLFYCRKLRYLDLSHNNLTFLPADIGLLQNLQNLAVTANRIEALPPELFQCRKLRALHLGNNVLQSLPSRVGELTNLTQIELRGNRL |
9 | 4u08A | 0.37 | 0.37 | 10.86 | 6.96 | CNFpred | | NVLPKEIGQLQNLQILHLRNNQLTTLPKEIGQLQNLQKLLLNKNKLTTLPKEIGQLQNLQKLKLYEN---QLTTLPKEIGQLQNLQELDLDGNQLTTLPENIGQLQRLQTLYLGNNQLNFLPKEIGQLRNLESLDLEHNQLNALPKEIGKLQKLQTLNLKYNQL |
10 | 4u06A | 0.40 | 0.39 | 11.52 | 1.50 | DEthreader | | LTLPKEIEQLKNLQVLDLGSNQLTVLPQEIGQLKNLQLLYLHSNRLTTLSKDIEQLQNLKSLDLSNN--Q-LTTLPNEIEQLKNLKSLYLSENQFATFPKEIGQLQNLKVLFLNNNQITILPNEIAKLKKLQYLYLSDNQLITLPKEIEQLKNLQTLDLSYNQL |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Download alignment lists the threading program used to identify the template, and provide the 3D structure of aligned regions of threading templates (threading[1-10].pdb.gz). |
(f) | Template residues identical to query sequence are highlighted in color. |
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