Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Downloadalignment | | 20 40 60 80 100 120 140 160 180 200 220 240 260
| | | | | | | | | | | | | |
| SS Seq | CCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCSSSHSHCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHCCCCC MGSKEDAGKGCPAAGGVSSFTIQSILGGGPSEAPREPVGWPARKRSLSVSSEEEEPDDGWKAPACFCPDQHGPKEQGPKHHPPIPFPCLGTPKGSGGSGPGGLERTPFLSPSHSDFKEEKERLLPAGSPSPGSERPRDGGAERQAGAAKKKTRTVFSRSQVYQLESTFDMKRYLSSSERACLASSLQLTETQVKTWFQNRRNKWKRQLSAELEAANMAHASAQTLVSMPLVFRDSSLLRVPVPRSLAFPAPLYYPGSNLSALPLYNLYNKLDY |
1 | 2kt0A | 0.40 | 0.12 | 3.56 | 1.26 | FFAS-3D | | -------------------------------------------------------------------------------------------------------------------------------SKQPTSAENSVAKKEDKVPVKKQKTRTVFSSTQLCVLNDRFQRQKYLSLQQMQELSNILNLSYKQVKTWFQNQRMKSKRWQK---------------------------------------------------------------- |
2 | 1vt4I3 | 0.09 | 0.09 | 3.45 | 1.74 | MapAlign | | GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG-----GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG |
3 | 1lfuP | 0.25 | 0.07 | 2.27 | 1.28 | SPARKS-K | | ---------------------------------------------------------------------------------------------------------------------------------------------------MARRKRRNFNKQATEILNEYFYSNPYPSEEAKEELAKKSGITVSQVSNWFGNKRIRYKKNIGKFQEEANIYAAKTAVTA----------------------------------------------- |
4 | 4zktB | 0.05 | 0.05 | 2.28 | 1.55 | MapAlign | | YRQTNYLSSKNNLVIFGPGSNIIKNNVIYYKKEYAESGMGTMLEIWFQLIKSLYYLYGIKPNDNLNIPYRLRNEFNSLEYSELDMIDFLISGGIDYKLLNTNPYWFIDKYFIDTSKNFEKYKNDYEIKIKNNNYINLSSDFLKVISSLVYSFLNNTMDYIFRNYSLDITASKSV-LAQEKLIKKLITNTLRDISNQSQIAINNIDKFFNNAAMCVFENNKQNTIKSKLIGSKEDNCGWEIYFENDGLVFNIIDSNGNEKNIYLSNISNNSWHY |
5 | 1ahdP | 0.41 | 0.10 | 3.02 | 1.09 | CNFpred | | ---------------------------------------------------------------------------------------------------------------------------------------------------MRKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALSLTERQIKIWFQNRRMKWKKENKTKGEPG---------------------------------------------------------- |
6 | 2pffB | 0.12 | 0.12 | 4.36 | 1.42 | MapAlign | | GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGAQDVWNRADNHFKDTYGFSILDIVGLLSATQF-TQPALTLMEKAAFEDLKLVEVVFYRGMTMQVERVGKRTGWLVEIVNYNVENQQYVAAGDLRALDTDIIELQKSLSLEEVEGHLF |
7 | 2cueA | 0.29 | 0.08 | 2.57 | 1.43 | HHsearch | | ----------------------------------------------------------------------------------------------------------------------------------------------GSSGSSGQRNRTSFTQEQIEALEKEFERTHYPDVFARERLAAKIDLPEARIQVWFSNRRAKWRREEKLRNQRRQSGPSSG--------------------------------------------------- |
8 | 4fl2A | 0.06 | 0.06 | 2.58 | 1.34 | MapAlign | | REEAEDYLVQGGMSDGLYLLRQSRNYLGGFALSVAHGRKAHHYTIEFHGKISREESEQIVLIGSKTNGKFLIRARDNNGSYALCLLHEGKVLHYRIDKDKTGKLSIPEGKKFDTLWQLVEHYLGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMLDNPYIVRMIGICEAESWMVMEHVKDKNIIELVHQVSMGMKYLEESNFVHRDLAARNVLLVTQHYAKISDFGLSVKWYAPECINYYKFSSKSDVWSFGVLMWE |
9 | 1pufA | 0.35 | 0.10 | 2.85 | 1.25 | FFAS-3D | | ----------------------------------------------------------------------------------------------------------------------------------------NNPAANWLHARSTRKKRCPYTKHQTLELEKEFLFNMYLTRDRRYEVARLLNLTERQVKIWFQNRRMKMKKINKDR-------------------------------------------------------------- |
10 | 1pufA | 0.34 | 0.10 | 2.85 | 1.28 | SPARKS-K | | ----------------------------------------------------------------------------------------------------------------------------------------NNPAANWLHARSTRKKRCPYTKHQTLELEKEFLFNMYLTRDRRYEVARLLNLTERQVKIWFQNRRMKMKKINKDRAK------------------------------------------------------------ |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Download alignment lists the threading program used to identify the template, and provide the 3D structure of aligned regions of threading templates (threading[1-10].pdb.gz). |
(f) | Template residues identical to query sequence are highlighted in color. |
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