>A2RRH5 (167 residues) FPLDGTELCIWNTKDPSHQLLILRGHHQPITAMAFGNKVNPLLICSASLDYVIMWNLDEC REKVLQGLVPRGTVMGSLLGKVLCLQLSLDDHVVAVCAGNKIFMLDIETQAVRAELQGHL GPVTAVEFCPWRAGTLISASEDRGFKVWDHCTGSLIYSSSVLSAYPL |
Sequence |
20 40 60 80 100 120 140 160 | | | | | | | | FPLDGTELCIWNTKDPSHQLLILRGHHQPITAMAFGNKVNPLLICSASLDYVIMWNLDECREKVLQGLVPRGTVMGSLLGKVLCLQLSLDDHVVAVCAGNKIFMLDIETQAVRAELQGHLGPVTAVEFCPWRAGTLISASEDRGFKVWDHCTGSLIYSSSVLSAYPL |
Prediction | CCCCCCSSSSSSCCCCCSSSSSSCCCCCCSSSSSSCCCCCCSSSSSSCCCSSSSSSCCCCCSSSCCCCCCCCSSSCCCCCCSSSSSSCCCCCSSSSSSCCSSSSSSCCCCCSSSSSCCCCCCSSSSSSSCCCCCSSSSSSCCCCSSSSSCCCCCSSSSCCCSCCCCC |
Confidence | 99898979988479997578986476887899999479997199994699289967899926511367766435547799889999989999999972994899979999588988487896899998089998899990899189977899938996143027759 |
H:Helix; S:Strand; C:Coil | |
Sequence |
20 40 60 80 100 120 140 160 | | | | | | | | FPLDGTELCIWNTKDPSHQLLILRGHHQPITAMAFGNKVNPLLICSASLDYVIMWNLDECREKVLQGLVPRGTVMGSLLGKVLCLQLSLDDHVVAVCAGNKIFMLDIETQAVRAELQGHLGPVTAVEFCPWRAGTLISASEDRGFKVWDHCTGSLIYSSSVLSAYPL |
Prediction | 75256421332227444421320424643220000026453210000233302022174344334454444332041143302000002434220002343110111643523446632733330413016513210001344042424073351234042235347 |
Values range from 0 (buried residue) to 8 (highly exposed residue) | |
Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Downloadalignment | 20 40 60 80 100 120 140 160 | | | | | | | | | |||||||||||||
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SS Seq | CCCCCCSSSSSSCCCCCSSSSSSCCCCCCSSSSSSCCCCCCSSSSSSCCCSSSSSSCCCCCSSSCCCCCCCCSSSCCCCCCSSSSSSCCCCCSSSSSSCCSSSSSSCCCCCSSSSSCCCCCCSSSSSSSCCCCCSSSSSSCCCCSSSSSCCCCCSSSSCCCSCCCCC FPLDGTELCIWNTKDPSHQLLILRGHHQPITAMAFGNKVNPLLICSASLDYVIMWNLDECREKVLQGLVPRGTVMGSLLGKVLCLQLSLDDHVVAVCAGNKIFMLDIETQAVRAELQGHLGPVTAVEFCPWRAGTLISASEDRGFKVWDHCTGSLIYSSSVLSAYPL | |||||||||||||||||||
1 | 5wjcA | 0.16 | 0.15 | 5.00 | 1.50 | DEthreader | GHAEDQVICLWDVQTVISPIAKYHRHTDIVNDVQFHPQH-EALLASVSDCTLQIHDTRL---NP---EEEAPKVIQAHSKAINAVAINPFDYLLATASAKTVALWDLRNPQRLHTLEGHEDEVYGLEWSPHDEPILASSSTDRRVCIWDLEKIELLFMHGGHTNRIS | |||||||||||||
2 | 5gvaA2 | 0.18 | 0.17 | 5.66 | 1.68 | SPARKS-K | AGSSDFLVKIVDVMD-SSQQKTFRGHDAPVLSLSFDPKDI--FLASASCDSVRVWQISDQTCAISWPLLQKCNDVINAKSI-CRLAWQPSGKLLAIPVEKSVKLYRRESWSHQFDLSDISQTLNIVTWSP-CGQYLAAGSINGLIIVWNVETKDCMERVKHEKGYAI | |||||||||||||
3 | 5nnzB | 0.19 | 0.17 | 5.43 | 0.42 | MapAlign | -GSFDHTVVVWDADTG-RKVNILIGHCAEISSASFNWD--CSLILTGSMKTCKLWDATNG---------KCVATLTGHDDEILDSCFDYTGKLIATASAGTARIFSAATRKCIAKLEGHEGEISKISFNP-QGNHLLTGSSDKTARIWDAQTGQCLQVLEGHTDE-- | |||||||||||||
4 | 5yzvA | 0.21 | 0.19 | 6.10 | 0.31 | CEthreader | SGSRDGTARLWNVATG-TEHAVLKGHTDYVYAVAFSPD--GSMVASGSRDTIRLWDVATG---------KERDVLQAPAENVVSLAFSPDGSMLVHGSDSTVHLWDVASGEALHTFEGHTDWVRAVAFSP-DGALLASGSDDRTIRLWDVAAQEEHTTLEGHTEPVH | |||||||||||||
5 | 5a1uD1 | 0.17 | 0.16 | 5.14 | 1.47 | MUSTER | LHPTNGSVCVWNHETQ-TLVKTFEVCDLPVRAAKFVARKN-WVVTGADDMQIRVFNYNTLE---------RVHMFEAHSDYIRCIAVHPTQPFILTSSDMLIKLWDWDKKSCSQVFEGHTHYVMQIVINPKDNNQFASASLDRTIKVWQLGSSSPNFTLEGHEKGVN | |||||||||||||
6 | 3dm0A | 0.18 | 0.17 | 5.65 | 0.66 | HHsearch | SASRDKSIILWKLTKG-VAQRRLTGHSHFVEDVVLSSDGQ--FALSGSWDELRLWDLAAGVSTRFVGHSLDNYTIEGHRDWVSCVRFSPNTLTIVSASDKTVKVWNLSNCKLRSTLAGHTGYVSTVAVSP-DGSLCASGGKDGVVLLWDLAEGKKLYSLEANS--VI | |||||||||||||
7 | 4lg9A2 | 0.15 | 0.13 | 4.44 | 1.82 | FFAS-3D | WNKKDKTTIIWDAHTG-EAKQQFPFHSAPALDVDWQS--NNTFASCSTDMCIHVCKLGQD---------RPIKTFQGHTNEVNAIKWDPTGNLLASCSDMTLKIWSMKQDNCVHDLQAHNKEIYTIKWSPTANLMLASASFDSTVRLWDVDRGICIHTM-------- | |||||||||||||
8 | 6jp6A2 | 0.12 | 0.11 | 4.01 | 0.48 | EigenThreader | QSGDDSTIKIWHYNQNKFLIMQGRYKTCCLFNVVFIAE--ELLVVISPDGHLVVYNITEYVVDHKLDAPAPVAQLPVHQSGVKSLDYNRTSATILTGGDNGLGLSNLDSNKTSDFIAAASSTITSGMLIG--GKEVITTSVDQVIRAWEIGKLSLVDKKR------- | |||||||||||||
9 | 5cvoA | 0.16 | 0.15 | 4.99 | 2.13 | CNFpred | -----TTVKVWNAHK-GFCMSTLRTHKDYVKALAYAKDK-ELVASAGLDRQIFLWDVNTLTALTASNNTVTTSSLSGNKDSIYSLAMNQLGTIIVSGSTKVLRVWDPRTCAKLMKLKGHTDNVKALLLNR-DGTQCLSGSSDGTIRLWSLGQQRCIATYRVHDEGVW | |||||||||||||
10 | 2pbiD | 0.13 | 0.13 | 4.35 | 1.50 | DEthreader | GHSQDGKVIVWDSFTT-NKEHAVTMPCTWVMACAYAPS--GCAIACGGLNKCSVYPLT--FD-KN-ENMAKKKSVAMHTNYLSACSFTNSDMQILTASGGTCALWDVESGQLLQSFHGHGADVLCLDLAPSTGNTFVSGGCDKKAMVWDMRSGQCVQAFETHESSDS | |||||||||||||
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Top 10 structural analogs in PDB (as identified by
TM-align)
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Top 5 enzyme homologs in PDB
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Template proteins with similar binding site:
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References: | |
1. | Wei Zheng, Chengxin Zhang, Yang Li, Robin Pearce, Eric W. Bell, Yang Zhang. Folding non-homology proteins by coupling deep-learning contact maps with I-TASSER assembly simulations. In preparation, 2020. |