>A2RRD8 (213 residues) MALSQGLLTFRDVAIEFSQEEWKCLDPAQRTLYRDVMLENYRNLVSLDISSKCMMNTLSS TGQGNTEVIHTGTLQRQASYHIGAFCSQEIEKDIHDFVFQWQEDETNDHEAPMTEIKKLT SSTDRYDQRHAGNKPIKGQLESRFHLHLRRHRRIHTGEKPYKCEECEKVFSCKSHLEIHR IIHTGEKPYKCKVCDKAFKHDSHLAKHTRIHRG |
Sequence |
20 40 60 80 100 120 140 160 180 200 | | | | | | | | | | MALSQGLLTFRDVAIEFSQEEWKCLDPAQRTLYRDVMLENYRNLVSLDISSKCMMNTLSSTGQGNTEVIHTGTLQRQASYHIGAFCSQEIEKDIHDFVFQWQEDETNDHEAPMTEIKKLTSSTDRYDQRHAGNKPIKGQLESRFHLHLRRHRRIHTGEKPYKCEECEKVFSCKSHLEIHRIIHTGEKPYKCKVCDKAFKHDSHLAKHTRIHRG |
Prediction | CCCCCCCCSSSSSSSSCCCCCCCCCCHHHHHHHHHHHHHHHCCSSSSCCCCCCCCSSSSCCCCCCCCSSSSCSSCCCCCCCCCCCCCCCCCCCCCCCSSSSSSCCCCCSCSSCCCCCCSCCCCCCCCCSSCCCCCSCCCCCCCCCCCHHHHCCSCCCCCCSCCCCCCCSSCCCCCCHHHCCSSCCCCCSCCCCCCCSSCCCCCCCCSSCCCCC |
Confidence | 997767603664776378102432794554776677787642556625355575113320126876448812253556776666655430322013312035324689153367755325775210130158588317886512455022233215880810787805264545412102323588680278887641454430012532589 |
H:Helix; S:Strand; C:Coil | |
Sequence |
20 40 60 80 100 120 140 160 180 200 | | | | | | | | | | MALSQGLLTFRDVAIEFSQEEWKCLDPAQRTLYRDVMLENYRNLVSLDISSKCMMNTLSSTGQGNTEVIHTGTLQRQASYHIGAFCSQEIEKDIHDFVFQWQEDETNDHEAPMTEIKKLTSSTDRYDQRHAGNKPIKGQLESRFHLHLRRHRRIHTGEKPYKCEECEKVFSCKSHLEIHRIIHTGEKPYKCKVCDKAFKHDSHLAKHTRIHRG |
Prediction | 741365202141336332221151054044613331043223432054231535633432565554423443425454566446413541454135413424442446442415512433141541311103423633544141513444445312412424342442042231311224422444121444454304322020141473258 |
Values range from 0 (buried residue) to 8 (highly exposed residue) | |
Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Downloadalignment | 20 40 60 80 100 120 140 160 180 200 | | | | | | | | | | | |||||||||||||
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SS Seq | CCCCCCCCSSSSSSSSCCCCCCCCCCHHHHHHHHHHHHHHHCCSSSSCCCCCCCCSSSSCCCCCCCCSSSSCSSCCCCCCCCCCCCCCCCCCCCCCCSSSSSSCCCCCSCSSCCCCCCSCCCCCCCCCSSCCCCCSCCCCCCCCCCCHHHHCCSCCCCCCSCCCCCCCSSCCCCCCHHHCCSSCCCCCSCCCCCCCSSCCCCCCCCSSCCCCC MALSQGLLTFRDVAIEFSQEEWKCLDPAQRTLYRDVMLENYRNLVSLDISSKCMMNTLSSTGQGNTEVIHTGTLQRQASYHIGAFCSQEIEKDIHDFVFQWQEDETNDHEAPMTEIKKLTSSTDRYDQRHAGNKPIKGQLESRFHLHLRRHRRIHTGEKPYKCEECEKVFSCKSHLEIHRIIHTGEKPYKCKVCDKAFKHDSHLAKHTRIHRG | |||||||||||||||||||
1 | 5v3jE | 0.20 | 0.20 | 6.29 | 0.67 | CEthreader | HLLRHQRIHTGEKPHKCKECGKAFRYDTQLSLHLLTHAGARRFECKDCDKVYSCASQLALHQMSHTGEKPHKCKECGKGFISDSHLLRHQSVHTGETPYKCKECGKGFRRGSELARHQRAHSGDKPYKCKECGKSF------TCTTELFRHQKVHTGDRPHKCKECGKAFIRRSELTHHERSHSGEKPYECKECGKTFGRGSELSRHQKIHT- | |||||||||||||
2 | 6ml2A | 0.17 | 0.11 | 3.55 | 0.68 | EigenThreader | ---SKSFTCDQCGKYFSQKRQLKSH---YRVHT----------------------SLPECSHCHRKF------------MDVSQLKKHLRTHTGEKPFTC-------EICGKSFT------------------------------AKSSLQTHIRIHRGEKPYSICGKCFSDSSAKRRHCILHTGKKPFSCPECGLQFARLDNLKAHLKIHSK | |||||||||||||
3 | 5v3jE1 | 0.39 | 0.20 | 5.83 | 1.36 | FFAS-3D | ----------------------------------------------------------------------------------------------------------PHKCKECGKAFHTPSQLSHHQKLHVGEKPYKCQECGKAFPSLSLHHRVHTDEKCFECKECGKAFMRPSHLLRHQRIHTGEKPHKCKECGKAFRYDTQLSLHLLTHAG | |||||||||||||
4 | 2i13A | 0.32 | 0.23 | 6.78 | 2.87 | SPARKS-K | ------------------------------------------FSRSDHLAEHQRTHKPYKCPECGKSFSDKKDLTRHQRTHTGEKPYKCPEC---------------------GKSFSQRANLRAHQRTHTGEKPYACECGKSFSQHLRAHQRTHTGEKPYKCPECGKSFSREDNLHTHQRTHTGEKPYKCPECGKSFSRRDALNVHQRTH-- | |||||||||||||
5 | 5v3gA | 0.35 | 0.21 | 6.17 | 1.76 | CNFpred | -----------------------------------------------------------------RGFRDKSHLLSHQRTHTG---EKPYVCRECGRGFRDKS------------------NLLSHQRTHTGEKPYVCRCGRGFSWVLLRHQRTHTGEKPYVCRECGRGFRDKSNLLSHQRTHTGEKPYVCRECGRGFRNKSHLLRHQRTHT- | |||||||||||||
6 | 6z16A | 0.06 | 0.05 | 2.21 | 0.83 | DEthreader | -------PTLHIAMFAPFLALLVPYVGWFVFPLPIALFVYFLSYIDDVDGSLLFALLITGI-GSLVV---FYVYLLLFGAMLGVVL----------SSSFLIASYGAQKMLTMFGGLLMLGGFVALLFIPALVLLFGFTKFIWLPAQDLKITRDIRRLGGLMTI-MPITF--TIAL-IG--L-----S--------LPPFNGFLSKEMFTFTP | |||||||||||||
7 | 1vt4I3 | 0.06 | 0.06 | 2.48 | 1.29 | MapAlign | -----SILNTLQQLKFY-KPYICDNDPKYERLVNAILDFLPKGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG-- | |||||||||||||
8 | 5v3jE | 0.26 | 0.25 | 7.82 | 2.12 | MUSTER | KAFPSNAQLSLHHRVHTDEKCFEC-KECGKAFMRPSHLLRHQRIHTGEKPHKCKECGKAFRY--DTQLSLHLLTHAGARRFECKDCDKVYSCA--SQLALHQMSHTGEKPHKCKECGKGFISLLRHQSVHTGETPYKCKECGKGFRRLARHQRAHSGDKPYKCKECGKSFTCTTELFRHQKVHTGDRPHKCKECGKAFIRRSELTHHERSHSG | |||||||||||||
9 | 1x6fA | 0.18 | 0.06 | 1.99 | 1.13 | HHsearch | -----------------------------------------------------------------------------------------------------------------------------------------GSGSSGLKRDFIILGGPRLQNSTYQCKHCDSKLQSTAELTSHLNIHNEE----FQKRAKRQERRKQLLSKQKYADG | |||||||||||||
10 | 5v3gD | 0.29 | 0.22 | 6.57 | 0.59 | CEthreader | ----------------------------------------------------PGSEKPYVCRECGRGFSNKSHLLRHQRTHTGEKP---YVCRECGRGFRDKSHLLSHQRTHTGEGFRDKSNLLSHQRTHTGEKPYVCREGFSWQSVLLRHQRTHTGEKPYVCRECGRGFRDKSNLLSHQRTHTGEKPYVCRECGRGFRNKSHLLRHQRTHT- | |||||||||||||
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Top 10 structural analogs in PDB (as identified by
TM-align)
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Top 5 enzyme homologs in PDB
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Template proteins with similar binding site:
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References: | |
1. | Wei Zheng, Chengxin Zhang, Yang Li, Robin Pearce, Eric W. Bell, Yang Zhang. Folding non-homology proteins by coupling deep-learning contact maps with I-TASSER assembly simulations. In preparation, 2020. |