Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Download alignment | | 20 40 60 80 100 120 140 160
| | | | | | | | |
| SS Seq | CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCC MNWFGSNFFRCPEDLSLLNIYSPLLSHMSSEDEHFISNLRGHVPASAVVKQPVRGASGRTTITAIVQTGGGWSTGLFSVCRDRRICFCGLFCPMCLECDIARHYGECLCWPLLPGSTFALRIGTRERHKIQGTLCEDWLAVHCCWAFSICQVARELKMRTSQVYEICAVPMTKDTLV |
1 | 2bmaA | 0.06 | 0.06 | 2.68 | 0.48 | CEthreader | | VMKLDPNQVEFLQAFHEILYSLKPLFMEEPKYLPIIETLSEPERAIQFRVCWLDDNGVQRKNRCFRVQYNSALGYKGGLRFHPSVNLSIVKFLGFEQIFKNSLTGLSMGGGSDNEILKFCQAFMNELYRHIGPCTDVPAGDIGVGGREIGYLYGQYKKIVNSFNGTLTGKNVKWGGS |
2 | 4qiwA2 | 0.05 | 0.05 | 2.16 | 0.62 | EigenThreader | | KLKQRVLNGPEKYPGMESNRELIAEKLDIGWTVERHLEDGDLHRYRTFRLNPYNADFDGDEMNLHVEVQNHIIAGIQDHIS---GGYLLTREGRYEVEQMLMFAGMDGEPLWSGKTIFSLLDIIVREYGVERARQFLDQVT----KLTIWVITHKG---KVDYDIVQFKYGEDGVDP |
3 | 6em33 | 0.15 | 0.12 | 3.98 | 0.35 | FFAS-3D | | ----GQNFCR--NEYNVTGLCTRQSCPLANS--KYATVKCDNGKLYLYMKTPERAHTPAKLWERIKLSKNYTDEHLLHWSKFFRHKCKQRFTKLTQVMITERRLALREEERHYVGVAVKRREQNRERKALVAAKIEK-------------AIEKELMDR------------------ |
4 | 6djyA | 0.15 | 0.15 | 4.94 | 0.92 | SPARKS-K | | ENELTHYVFTTPLSMPPMLGYVPL---NEVATSKFFSNVNDHFPDTTITQAYNLTNSIKPGDT--SLPDAEWFWKFFTSIQPPMDNVMYWACQFLSSCMFSNLRQMNLSPILCPYYDLITTTEIRAYVDAHEELKSLLTYLCLCTIVGLCDTFTETRNMDTGEYVWKVRDVVSRNHT |
5 | 3o8yA | 0.10 | 0.04 | 1.46 | 0.68 | CNFpred | | ------------------------------------------------------------------------------------DWLLAKIWVRSSDFHVHQTITLLRTHLVSEVFGIAMYRQLPAV-----HPIFKLLVAHVRFTIAINTKAREQLI------------------- |
6 | 4av3A3 | 0.04 | 0.03 | 1.67 | 0.83 | DEthreader | | --N-AAVVRKPVGKMARANVVAEAAKIGPALKVAYQGGSVMLSGFLGLVYQLNIYTGINFVAMVSGY--------------------------------SIIAMFDGGVYTKGDNVGDAGLGADLLEFVVATSVSVDSYGPGNTAAIGKGFAIGSAIFAALSLFASYFS-------- |
7 | 2epgB | 0.06 | 0.06 | 2.52 | 0.71 | MapAlign | | TYRIPRQGKRVDAVFFASKEILKDLEAENYASLQQLNVATLPGIVEPALAPDIHWGYGFPIGGVAAVVSPGKEILKEGAGWLSQGRLWANFERGAPQIGTGLITGSRGLGHQVCQDYVERFLKVAPRQLAAAPIKPEGQDYL-QAAAAANFAFANRQLIAHFVREAFEKVGFTPRDH |
8 | 1texD | 0.08 | 0.07 | 2.92 | 0.52 | MUSTER | | STLLVESLRATGV---AGEPQEFFQYLPNTSMSPQPREWFADVEDQSILRLLDPLIEGKPDLAPATQTVGRTPNGVW-GGKLMWNQTPLLVQRAKLLSAIRDVVGSDPVL-VVSQAVSFWRAVQTRVWRGAEYHAGAIAHVITMLRAQEEGWRAWFTEENVEPIDVD------PYLW |
9 | 1vt4I3 | 0.12 | 0.09 | 3.21 | 0.86 | HHsearch | | YALHIVDHYNIPKTFDSDDLIPPYLDQYFYSHGHHLKNPERMTLFRMVFLDFR------FLEQKIRHDSTAWNASG-SILNTLQQ-LK---FYKPYICDNDPKYER-LVNAILD--------FLP--KIEENLICSKYTDLLR--------IA----LMAEDEAI------FEEAHK |
10 | 2e26A2 | 0.07 | 0.07 | 2.81 | 0.46 | CEthreader | | RCVQGSCVCDEQWGGLYCDEPETSLPTQLKDNFNRAPSNQNWLTVSGGKLSTVCGAVASGLALHFSGGCSRLLVTVDLNLTNAEFIQFYFMYGCLITPSNRNQGVLLEYSVNGGITWNLLMEIFYDQYSKPGFVNILLPPDAKEIATRFRWWQPRHDGLDQNDWAIDNVLISR---- |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Download alignment lists the threading program used to identify the template, and provide the 3D structure of aligned regions of threading templates (threading[1-10].pdb.gz). |
(f) | Template residues identical to query sequence are highlighted in color. |
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