>A1L4K1 (368 residues) MEEESGEELGLDRSTPKDFHFYHMDLYDSEDRLHLFPEENTRMRKVVQAEMANESRGAGD GKAQRDLQEEVDELVHLYGLEDDHELGDEFVDENIPRTGVSEYPPYMMKRRDPAREQRDW RLSGEAAEAEDLGFGGWGSAGQCQDLREAYRYTHGRASEEYECYVIPEEEDEEEAADVFC VTCKTPIRAFQKVFDEHKEHEVIPLNEALESAKDEIHKNMYKLEKQIIEMENFANHLEEV FITVEENFGKQEQNFESHYNEILETLAQKYEEKIQALGEKKKEKLEALYGQLVSCGENLD TCKELMETIEEMCHEEKVDFIKDAVAMADRLGKFLKTKTDVEISAQPEFEDQTLDFSDVE QLMGSINT |
Sequence |
20 40 60 80 100 120 140 160 180 200 220 240 260 280 300 320 340 360 | | | | | | | | | | | | | | | | | | MEEESGEELGLDRSTPKDFHFYHMDLYDSEDRLHLFPEENTRMRKVVQAEMANESRGAGDGKAQRDLQEEVDELVHLYGLEDDHELGDEFVDENIPRTGVSEYPPYMMKRRDPAREQRDWRLSGEAAEAEDLGFGGWGSAGQCQDLREAYRYTHGRASEEYECYVIPEEEDEEEAADVFCVTCKTPIRAFQKVFDEHKEHEVIPLNEALESAKDEIHKNMYKLEKQIIEMENFANHLEEVFITVEENFGKQEQNFESHYNEILETLAQKYEEKIQALGEKKKEKLEALYGQLVSCGENLDTCKELMETIEEMCHEEKVDFIKDAVAMADRLGKFLKTKTDVEISAQPEFEDQTLDFSDVEQLMGSINT |
Prediction | CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHCHHHHHCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCSSSCCCCCCSSCCCCCCCCCCCCCCCSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCC |
Confidence | 96433568887888887752123213687778665787765412224543467887654445641112100333214775530344444302577767766777544566786301234434555454212221135676646468987523357875224666778832389871598055994331123125765969620099999999887999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999983891799995999999999998077888877784421046568999999982089 |
H:Helix; S:Strand; C:Coil | |
Sequence |
20 40 60 80 100 120 140 160 180 200 220 240 260 280 300 320 340 360 | | | | | | | | | | | | | | | | | | MEEESGEELGLDRSTPKDFHFYHMDLYDSEDRLHLFPEENTRMRKVVQAEMANESRGAGDGKAQRDLQEEVDELVHLYGLEDDHELGDEFVDENIPRTGVSEYPPYMMKRRDPAREQRDWRLSGEAAEAEDLGFGGWGSAGQCQDLREAYRYTHGRASEEYECYVIPEEEDEEEAADVFCVTCKTPIRAFQKVFDEHKEHEVIPLNEALESAKDEIHKNMYKLEKQIIEMENFANHLEEVFITVEENFGKQEQNFESHYNEILETLAQKYEEKIQALGEKKKEKLEALYGQLVSCGENLDTCKELMETIEEMCHEEKVDFIKDAVAMADRLGKFLKTKTDVEISAQPEFEDQTLDFSDVEQLMGSINT |
Prediction | 75564564454652424513222030244754041215645434542446347365444554344535552552365242545352365235552454624534143366545445445251354146346443563644530540253144554435654556434066057240502143162020113211552473413204400441222144105304521540351154045115302320541253045205402510452164025304631551254045125404520540350052035227553141034144015204512753451525245404513240540251066258 |
Values range from 0 (buried residue) to 8 (highly exposed residue) | |
Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Downloadalignment | 20 40 60 80 100 120 140 160 180 200 220 240 260 280 300 320 340 360 | | | | | | | | | | | | | | | | | | | |||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
SS Seq | CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHCHHHHHCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCSSSCCCCCCSSCCCCCCCCCCCCCCCSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCC MEEESGEELGLDRSTPKDFHFYHMDLYDSEDRLHLFPEENTRMRKVVQAEMANESRGAGDGKAQRDLQEEVDELVHLYGLEDDHELGDEFVDENIPRTGVSEYPPYMMKRRDPAREQRDWRLSGEAAEAEDLGFGGWGSAGQCQDLREAYRYTHGRASEEYECYVIPEEEDEEEAADVFCVTCKTPIRAFQKVFDEHKEHEVIPLNEALESAKDEIHKNMYKLEKQIIEMENFANHLEEVFITVEENFGKQEQNFESHYNEILETLAQKYEEKIQALGEKKKEKLEALYGQLVSCGENLDTCKELMETIEEMCHEEKVDFIKDAVAMADRLGKFLKTKTDVEISAQPEFEDQTLDFSDVEQLMGSINT | |||||||||||||||||||
1 | 6yvuB | 0.08 | 0.05 | 1.92 | 0.67 | DEthreader | --------------------------Q-----S------RL-FINELVLVIDSMLFVDLICSVRKASKYYINEKE-------------------------------------------S--SYTEV-------------HKRFLILQGEV----------ENIAQ----------MKPKAEKESDDGLL----------------------P--EE--G--ENNEVCLEKENRFEIVDREKNSLESGKETALEFLEKEKQLTLLRSKLFQFKLLQSNSKLASTLEKISSSNKDLEDEKMKFQESLKKVDEIKAQREIEEQLKEQMEDMEESINEFKSEEMKLKLLLIKEITQQEGL--E--INELSYY | |||||||||||||
2 | 6qajA | 0.10 | 0.09 | 3.30 | 1.04 | SPARKS-K | ALINMVFQMGETGVAGFTNSLRMLQQKRWDEAAVNLAKSYNQTPNRAKRVITTFRTGTWDAYAAEALELLEHCGVCRELLPCLHSACSACL----GPGTVVDCPVCKQQCFSKD-IVENYFM------------------------------RDSGSERTVYC-----NVHKHEPLVLFCESCDTLTCRDCQLNA-HKDHQYQFLEDAVRNQRKLLASLVKRLGDKHATLQKSTKEVRSSIRQVSDVQKRVQVDVKMAILQIMKELNKRGRVLVNDAQKVTEGQQERLERQHWTMTKIQKHQEHILRFASWALEDNNTALLLSKKLIYFQLHRALKMIVDPVEPHGEMKFQWDLNAWTKSAEAF---- | |||||||||||||
3 | 6qajA | 0.10 | 0.09 | 3.45 | 1.24 | MapAlign | -----MLRIDERLRLKIYKDTEGYYTIGIGHLLTKSPSLNAAKSELDKAIGRNCNGVITKDEAEKLFNQDVDAAVRGIDSLDAVRRCALINMVFQMNSLRMLQQKRWDEAAVNLAKSIWYNQPNRAKRVITTFRTGTWDAYAAEALELLEHCGVCRERLSGSERTVYCNVHKHEPLVLFCESCDTLTCRDCQLN-AHKDHQYQFLEDAVRNQRKLLASLVKRLGDKHATLQKSTKEVRSSIRQVSDVQKRVQVDVKMAILQIMKELNKRGRVLVNDAQKVTEGQQERLERQHWTMTKIQKHQEHILRFASWAL--ESDNNTALLLSKKLIY----FQLHRALKMIVDPVEPHGEMKFQWDLNA----- | |||||||||||||
4 | 6qajA | 0.09 | 0.08 | 3.01 | 0.92 | CEthreader | INMVFQMGETGVAGFTNSLRMLQQKRWDEAAVNLAKSIWYNQTPNRAKRVITTFRTGTWDAYAAEALELLEHCGVCRELLPCLHSACSACLGPAD--GTVVDCPVCKQQCFSKDIVENYFM------------------------------------RDSGSERTVYCNVHKHEPLVLFCESCDTLTCRDCQL-NAHKDHQYQFLEDAVRNQRKLLASLVKRLGDKHATLQKSTKEVRSSIRQVSDVQKRVQVDVKMAILQIMKELNKRGRVLVNDAQKVTEGQQERLERQHWTMTKIQKHQEHILRFASWALESDNNTALLLSKKLIYFQLHRALKMIVDPVEPHGEMK-FQWDLNAWTKSAEAF-- | |||||||||||||
5 | 6h3aA | 0.10 | 0.07 | 2.53 | 1.07 | MUSTER | ------------------------------------------------------------------------------------------------LELLEHCGVCRERLRPERE----RLLP---------SACLGPTVVDCPVCKQQCFSKDIVENYFMRDETVYCNVHKHEPLVLFCESCDTLTCRDCQL-NAHKDHQYQFLEDAVRNQRKLLASLVKRLGDKHATLQKSTKEVRSSIRQVSDVQKRVQVDVKMAILQIMKELNKRGRVLVNDAQKVTEGQQERLERQHWTMTKIQKHQEHILRFASWALESNNTALLLSKKLIYFQLHRALKMIVDPVEPHGEM--KFQWDLNAWTKSAEAFGK | |||||||||||||
6 | 6qajA | 0.12 | 0.11 | 3.72 | 2.92 | HHsearch | MGE-TGVA-GFTNSLLQQKRWDEAANLAKSIWYNQTP---NRAKR----VITTFRTGTWDAYAAEALELLEHCGVCRELLPCLHSACSACLGPADG--TVVDCPVCKQQCFSK-DIVENYFMRDS------------------------------GSERTVYC-----NVHKHEPLVLFCESCDTLTCRDCQ-LNAHKDHQYQFLEDAVRNQRKLLASLVKRLGDKHATLQKSTKEVRSSIRQVSDVQKRVQVDVKMAILQIMKELNKRGRVLVNDAQKVTEGQQERLERQHWTMTKIQKHQEHILRFASWALESDNTALLLSKKLIYFQLHRALKMIVDPVEP--HGEMKFQWDLNAWTKSAEAF-- | |||||||||||||
7 | 6h3aA | 0.12 | 0.08 | 2.98 | 1.46 | FFAS-3D | ----------------------------------------------------------------------------LELLEHCGVCRERLREPRLLPCLHSACSACL------GPTVVDCPVCKQQCFSKD----------------------IVENYFMRDERTVYCNVHKHEPLVLFCESCDTLTCRDCQL-NAHKDHQYQFLEDAVRNQRKLLASLVKRLGDKHATLQKSTKEVRSSIRQVSDVQKRVQVDVKMAILQIMKELNKRGRVLVNDAQKVTEGQQERLERQHWTMTKIQKHQEHILRFASWALEDNNTALLLSKKLIYFQLHRALKMIVDPEPHGEMKFQWDLNAWTKSAEAFGKI-- | |||||||||||||
8 | 6qajA | 0.06 | 0.05 | 2.38 | 0.83 | EigenThreader | AAVRGILRNAKLKPVYDSLDAVRRCALINMVFQMGETGVAGFTNSLRMLQQAAVNLAKSIWYNQTPNRAKRVITTFRTGTW---DAYAAEALELLEHCGVCRERLRPERCSACLGDGTVVDC-----------PVCKQKDI----------VENYFMRDSGSERTVYCNVHKHEPLVLFCESCDTLTCRDCQLNAHKDHQYQ--FEDAVRNQRKLLASLVKRLGDKHATLQKSTKEVRSSIRQVSDVQKRVQVDVKMAILQIMKELNKRGRVLVNDAQKVTEGQQERLERQHWTMTKIQKHQEHILRFASWALESDNNTALLLSKKLIYF-------QLHRALKMIVDPVEPHGEMKFQWDLNAWTKS | |||||||||||||
9 | 6qu1A | 0.12 | 0.08 | 2.71 | 0.95 | CNFpred | -----------------------------------------------------------------------------RLLPCLHSACSACLGP-----TVVDCPVCKQQCFS-KDIVENYFMRD-------------------------------------------CNVHKHEPLVLFCESCDTLTCRDCQLN-AHKDHQYQFLEDAVRNQRKLLASLVKRLGDKHATLQKSTKEVRSSIRQVSDVQKRVQVDVKMAILQIMKELNKRGRVLVNDAQKVTEGQQERLERQHWTMTKIQKHQEHILRFASWALESNNTALLLSKKLIYFQLHRALKMIVDPVEHGEMKFQWDLNAWTKSAEAFGKIV- | |||||||||||||
10 | 6ar6A | 0.05 | 0.03 | 1.59 | 0.67 | DEthreader | ------LTPV-----------INDTAINY-N--VFYDSAFLINTLKKTVVESAIDTES-EIIYDKQKNFINYYKA-ENGESNLY-----------------------------NYKINNSLNPAISEDNDFNTTT-RFFPAKAQFEEYKRN----KDEFNTDCNMFSYSINVTYPSANQYEVR-----LLDHSGEWINKIIDI-SKEYISVKSKNL--IEEAKNLTSDSINYIEHEEISKIKGTIFDTVNGKLNLLRQEIEA--------------------VIS-LGK-CE--I-W-RME-GGSGHTDHFFS----------YFAFIA--DA-LITTLKP-Y--TNIRINFGDVNGFVSEVDYKLLQ | |||||||||||||
|
|
Top 10 structural analogs in PDB (as identified by
TM-align)
|
|
Top 5 enzyme homologs in PDB
|
Template proteins with similar binding site:
|
References: | |
1. | Wei Zheng, Chengxin Zhang, Yang Li, Robin Pearce, Eric W. Bell, Yang Zhang. Folding non-homology proteins by coupling deep-learning contact maps with I-TASSER assembly simulations. In preparation, 2020. |