>A1L1A6 (152 residues) MRAKPQSPLPRNPVPAWSPPTTTTDPMLEKDAAGGDFPANLVLQLMPLKTFPAAIRGVIQ SELNYSVILQWVVTMDPEPVLSWTFSGVPCGMGEKLFIRRLSCEQLGTYMCIATNSKKQL VSEPVTISLPKPIMQPTEAEPMEPDPTLSLSG |
Sequence |
20 40 60 80 100 120 140 | | | | | | | MRAKPQSPLPRNPVPAWSPPTTTTDPMLEKDAAGGDFPANLVLQLMPLKTFPAAIRGVIQSELNYSVILQWVVTMDPEPVLSWTFSGVPCGMGEKLFIRRLSCEQLGTYMCIATNSKKQLVSEPVTISLPKPIMQPTEAEPMEPDPTLSLSG |
Prediction | CCCCCCCCCCCCCCCCCCCCCCCCCCSSSSCCCCCCSSSSSSSSSCCCCCCCCCCCCSSSSSCCCCSSSSSSSSSSCCCSSSSSSCCSSCCCCCSSSSSCCCHHHCSSSSSSSSSCCCCSSSSSSSSSCCCCCCCCCCCCCCCCCCCSSSCC |
Confidence | 98777899998887644687667653575125787354799999157522588866459970796299999952206978999999998478977999327957777989999959961887759998478624898865325675077519 |
H:Helix; S:Strand; C:Coil | |
Sequence |
20 40 60 80 100 120 140 | | | | | | | MRAKPQSPLPRNPVPAWSPPTTTTDPMLEKDAAGGDFPANLVLQLMPLKTFPAAIRGVIQSELNYSVILQWVVTMDPEPVLSWTFSGVPCGMGEKLFIRRLSCEQLGTYMCIATNSKKQLVSEPVTISLPKPIMQPTEAEPMEPDPTLSLSG |
Prediction | 85553764447441452415434333213444445624140304233333235536431415343403031305342404132224443254644030450447243403130416534432431203144341635645434564424168 |
Values range from 0 (buried residue) to 8 (highly exposed residue) | |
Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Downloadalignment | 20 40 60 80 100 120 140 | | | | | | | | |||||||||||||
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SS Seq | CCCCCCCCCCCCCCCCCCCCCCCCCCSSSSCCCCCCSSSSSSSSSCCCCCCCCCCCCSSSSSCCCCSSSSSSSSSSCCCSSSSSSCCSSCCCCCSSSSSCCCHHHCSSSSSSSSSCCCCSSSSSSSSSCCCCCCCCCCCCCCCCCCCSSSCC MRAKPQSPLPRNPVPAWSPPTTTTDPMLEKDAAGGDFPANLVLQLMPLKTFPAAIRGVIQSELNYSVILQWVVTMDPEPVLSWTFSGVPCGMGEKLFIRRLSCEQLGTYMCIATNSKKQLVSEPVTISLPKPIMQPTEAEPMEPDPTLSLSG | |||||||||||||||||||
1 | 5uv6A | 0.18 | 0.18 | 5.80 | 1.19 | SPARKS-K | NDKWSIDPRVIILVNTPTQYSIMIQNVDVYDEGPYTCSVQTDNHVHLIVQVPMNISSDITVNEGSSVTLLCLAIGRPEPTVTWRHLSGFVSEDEYLEISDIKRDQSGEYECSALNDVAAPDVRKVKITVNPPYISKAKNTGVSVGQKGILSC | |||||||||||||
2 | 3k0wA | 0.18 | 0.15 | 4.94 | 1.25 | FFAS-3D | -TGHPFVQYMNKEIPNGNTSELIFNAVHVKDAGFYVCRVNQLDVCDIPESFQRSVDTSQKLMPGSTLVLQCVAVGSPIPHYQWFKNELPLETKKLYMVPYVDLEHQGTYWCHVYNDRDSQDSKKVEIIIDE--------------------- | |||||||||||||
3 | 5uv6A | 0.19 | 0.16 | 5.31 | 1.90 | CNFpred | ------------------QYSIMIQNVDVYDEGPYTCSVQTD-RVHLIVQVPPQISSDITVNEGSSVTLLCLAIGRPEPTVTWRHLSGFVSEDEYLEISDIKRDQSGEYECSALNDAPDVRKVKITVNYPPYISKAK-NTGVSVGQKGILSC | |||||||||||||
4 | 3dmkA | 0.15 | 0.13 | 4.41 | 1.00 | DEthreader | ------------FLKEPTN----AEIEC--DVPQISSDGKLCR-VH-APLS-AKIDPPTQTVFGRPAVFTCQYTGNPIKTVSWMKDGKAIGSESVLRIESVKKEDKGMYQCFVRNDRESAEASAELKLGGRDPPVIRAFQEMGPSRYQVGQY | |||||||||||||
5 | 6dldA | 0.17 | 0.16 | 5.43 | 1.10 | SPARKS-K | NDRWTSDPRVRLLINTPEEFSILITEVGLGDEGLYTCSFQTHQPYTTQVYLIVNISSPVTVNEGGNVNLLCLAVGRPEPTVTWRQLRDGFTEGEILEISDIQRGQAGEYECVTHNGVNSSRRVLVTVNYPPTITDVTS-ARTALGRAALLRC | |||||||||||||
6 | 3dmkA | 0.16 | 0.13 | 4.38 | 0.61 | MapAlign | -----------------VKKEDKGMYQCFVRNDRESAEASAELKLGFDPPVIRQAFQEETMEPGPSVFLKCVAGGNPTPEISWELDGKKIVVVSYLNITSVHANDGGLYKCIAKSKVGVAEH-SAKLNVYGLPYIRQMEKKAI--------- | |||||||||||||
7 | 3lafA | 0.12 | 0.12 | 4.38 | 0.31 | CEthreader | QLPNGSLLIQNILHSRHHKPDEGLYQCEASLGDSGSIISRTAKVMVAGPLRFLSQTESITAFMGDTVLLKCEVIGDPMPTIHWQKNQQDLLPSGALQISRLQPGDSGVYRCSARNPASTRTGNEAEVRILSDPGLHRQLYFLQRPSNVIAIE | |||||||||||||
8 | 5uv6A | 0.17 | 0.17 | 5.61 | 0.96 | MUSTER | NDKWSIDPRVIILVNTPTQYSIMIQNVDVYDEGPYTCSVQTDNHPKTSRVHIMNISSDITVNEGSSVTLLCLAIGRPEPTVTWRHLSGFVSEDEYLEISDIKRDQSGEYECSALNDVAAPDVRKVKITVNPPYISKAKNTGVSVGQKGILS- | |||||||||||||
9 | 3b43A | 0.12 | 0.12 | 4.38 | 0.48 | HHsearch | KEHTKLRSAPAYKMQKNNVASLVINKVDHSDVGEYTCKAENSVGAVASVILPPSKLKDVHETLGFPVAFECRINGSEPLQVSWYKDGELLKDVATLQILQTDQSHVGQYNCSASNPLGSASSTSLKVKEPPVFRKKPHPVETLKGADVHLEC | |||||||||||||
10 | 2v5tA | 0.16 | 0.13 | 4.39 | 1.24 | FFAS-3D | ---SPATTISDNRFAMLANNNLQILNINKSDEGIYRCEGRIVIVNVPPAISMPQKSFNATAERGEEMTFSCRASGSPEPAISWFRNGKLIEENTELTVRNIINSDGGPYVCRATNKAGEDEKQFLQVFVQ---------------------- | |||||||||||||
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Top 10 structural analogs in PDB (as identified by
TM-align)
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Top 5 enzyme homologs in PDB
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Template proteins with similar binding site:
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References: | |
1. | Wei Zheng, Chengxin Zhang, Yang Li, Robin Pearce, Eric W. Bell, Yang Zhang. Folding non-homology proteins by coupling deep-learning contact maps with I-TASSER assembly simulations. In preparation, 2020. |