Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Downloadalignment | | 20 40 60 80 100 120 140 160
| | | | | | | | |
| SS Seq | CCCCCHHHHHHHHHHHHHCCCCSSSSCCCCCCCCCHHHHHHHHHHHHCCCSSCCCCCCCCCCCCCCCCCHHHHHHHHHHCCSSSSSCCCCCCCCCCCCCCCCCCCSSSSSCCHHHHCCCCCCCCCCCCCSSCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCHHHHHHHCCCC IPQASPQQVQRCVEILSRAKRPLMVLGSQALLTPTSADKLRAAVETLGVPCFLGGMARGLLGRNHPLHIRENRSAALKKADVIVLAGTVCDFRLSYGRVLSHSSKIIIVNRNREEMLLNSDIFWKPQEAVQGDVGSFVLKLVEGLQGQTWAPDWVEELREADRQKEQTFREKAAMP |
1 | 6wo1A | 0.17 | 0.16 | 5.26 | 1.50 | DEthreader | | PLPGDADLITEAAQMINKAKRPIIFAGNGVLSSPEGPKLLKELSDKGRIPVTTTLQGLGAFDERDEKSLHSAANFAMQEADVLIALGVRFDDRVTGKVFAPKAAGIIHFEIQPKNINKI----VEGQIPVLGDVVASLGELVPQIEA-VDRSAWIGRCKATKERYP--FTYTPSQE |
2 | 2q29A2 | 0.28 | 0.27 | 8.33 | 1.78 | SPARKS-K | | -LLPCPKSVTSAISLLAKAERPLIILGKGAAYSQ-ADEQLREFIESAQIPFLPMSMAKGILEDTHPLSAAAARSFALANADVVMLVGARLNWLLAHGKGWAADTQFIQLDIEPQEIDSNRPI----AVPVVGDIASSMQGMLAELKQNTFPLVWRDILNIHKQQNAQKMHEKLSTD |
3 | 2ji8A | 0.29 | 0.27 | 8.32 | 0.87 | MapAlign | | AQIPAEDAIARAADLIKNAKRPVIMLGKGAAYA-QCDDEIRALVEETGIPFLPMGMAKGLLPDNHPQSAAATRAFALAQCDVCVLIGARLNWLMGKGKTWGELKKYVQIDIQANEM----DSNQPIAAPVVGDIKSAVSLLRKALKGAKADAEWTGALKAKVDGNKAKLAGKM--- |
4 | 2ji8A2 | 0.28 | 0.27 | 8.33 | 0.69 | CEthreader | | -QIPAEDAIARAADLIKNAKRPVIMLGKGAAYA-QCDDEIRALVEETGIPFLPMGMAKGLLPDNHPQSAAATRAFALAQCDVCVLIGARLNWLMGKGKTWGDLKKYVQIDIQANEM----DSNQPIAAPVVGDIKSAVSLLRKALKGAKADAEWTGALKAKVDGNKAKLAGKMTAE |
5 | 2q29A2 | 0.28 | 0.27 | 8.18 | 1.84 | MUSTER | | -LLPCPKSVTSAISLLAKAERPLIILGKGAAYSQA-DEQLREFIESAQIPFLPMSMAKGILEDTHPLSAAAARSFALANADVVMLVGARLNWLLAHGKGWAADTQFIQLDIEPQEIDSNRP----IAVPVVGDIASSMQGMLAELKQFTTPLVWRDILNIHKQQNAQKMHEKLSTD |
6 | 2ji8A2 | 0.28 | 0.27 | 8.33 | 1.56 | HHsearch | | -QIPAEDAIARAADLIKNAKRPVIMLGKGAAYAQCD-DEIRALVEETGIPFLPMGMAKGLLPDNHPQSAAATRAFALAQCDVCVLIGARLNWLMQHGKGWGDELKYVQIDIQANEMDSNQ----PIAAPVVGDIKSAVSLLRKALKGAKADAEWTGALKAKVDGNKAKLAGKMTAE |
7 | 2q29A2 | 0.28 | 0.27 | 8.16 | 2.00 | FFAS-3D | | ---PCPKSVTSAISLLAKAERPLIILGKGAAYS-QADEQLREFIESAQIPFLPMSMAKGILEDTHPLSAAAARSFALANADVVMLVGARLNWLLAHGKKWAADTQFIQLDIEPQEIDSN----RPIAVPVVGDIASSMQGMLAELKQNTTPLVWRDILNIHKQQNAQKMHEKLST- |
8 | 2q29A2 | 0.26 | 0.25 | 7.72 | 0.93 | EigenThreader | | -LLPCPKSVTSAISLLAKAERPLIILGKGAAYSQ-ADEQLREFIESAQIPFLPMSMAKGILEDTHPLSAAAARSFALANADVVMLVGARLNLLAHGKKGWAADTQFIQLDI----EPQEIDSNRPIAVPVVGDIASSMQGMLAELKTFTTPLVWRDILNIHKQQNAQKMHEKLSTD |
9 | 2q27A | 0.27 | 0.27 | 8.18 | 1.67 | CNFpred | | ALLPCPKSVTSAISLLAKAERPLIILGKGAAYSQ-ADEQLREFIESAQIPFLPMSMAKGILEDTHPLSAAAARSFALANADVVMLVGARLNWLLAHGKGWAADTQFIQLDIEPQEIDSN----RPIAVPVVGDIASSMQGMLAELKTFTTPLVWRDILNIHKQQNAQKMHEKLSTD |
10 | 1n0hA | 0.15 | 0.15 | 4.95 | 1.50 | DEthreader | | GQDFVMQSINKAADLINLAKKPVLYVGAGILNHADGPRLLKELSDRAQIPVTTTLQGLGSFDQEDPKSLDCAANLAVQNADLIIAVGARFDDRVTGNIFAPRRAGIIHFEVSPKNINK-V---VQTQIAVEGDATTNLGKMMSKIFPVKERSEWFAQINKWKKEYP--YA-YMEPE |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Download alignment lists the threading program used to identify the template, and provide the 3D structure of aligned regions of threading templates (threading[1-10].pdb.gz). |
(f) | Template residues identical to query sequence are highlighted in color. |
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