Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Downloadalignment | | 20 40 60 80 100 120 140 160 180 200 220 240 260 280 300
| | | | | | | | | | | | | | | |
| SS Seq | CCCCCCSSSSSSSSCCCCCHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCSSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCSCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHSCCCCCCCCCCCCCCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHSSSSSCCCCCCCCCCCCSSHHHHHHHHHCCCCHHHHCCHHHHHHHHHHHHHCCCCC MEGNKTWITDITLPRFQVGPALEILLCGLFSAFYTLTLLGNGVIFGIICLDCKLHTPMYFFLSHLAIVDISYASNYVPKMLTNLMNQESTISFFPCIMQTFLYLAFAHVECLILVVMSYDRYADICHPLRYNILMSWRVCTVLAVASWVFSFLLALVPLVLILRLPFCGPHEINHFCEILSVLKLACADTWLNQVVIFAACVFILVGPLCLVLVSYLRILAAILRIQSGEGRRKAFSTCSSHLCVVGLFFGSAIVTYMAPKSRHPEEQQKVLSLFYSLFNPMLNPLIYSLRNAEVKGALRRALRKERLT |
1 | 4zwjA | 0.15 | 0.14 | 4.71 | 1.33 | DEthreader | | ---GPNFSPFEYPQYYLAEPWQFSMLAAYMFLLIVLGFPINFLTLYVTVQHKKLRTPLNYILLNLAVADLFMVLGGFTSTLYTSLHGYFVFGPTGCNLQGFFATLGGEIALWSLVVLAIERYVVVCKP-MSNFRFGENHAIMGVAFTWVMALACAAPPLAGWSRY-I-----LQCSCGIDY-YTL-K-PEVNNESFVIYMFVVHFTIPMIIIFFCYGQLVFTVKEAATQKAEKEVTRMVIIYVIAFLICWVPYASVAFYIQGSCFGPIFMTIPAFFAKSAAIYNPVIYIMMNKQFRNCMLTTICCGKN- |
2 | 4n6hA2 | 0.18 | 0.17 | 5.48 | 2.09 | SPARKS-K | | ----------SPGARSASSLALAIAITALYSAVCAVGLLGNVLVMFGIVRYTKMKTATNIYIFNLALADALATST-LPFQSAKYLMETWPFGELLCKAVLSIDYYNMFTSIFTLTMMSVDRYIAVCHPVKALDFRTPAKAKLINICIWVLASGVGVPIMVMAVTRPRDGAVVCMLQFP--------SPSWYWDTVTKICVFLFAFVVPILIITVCYGLMLLRLRSKEKDRSLRRITRMVLVVVGAFVVCWAPIHIFVIVWTLVDIDVAALHLCIALGYANSSLNPVLYAFLDENFKRCFRQLCRKPCG- |
3 | 3dqbA | 0.14 | 0.14 | 4.63 | 0.63 | MapAlign | | --TGVVRSPFEAPQYYLAEPWQFSMLAAYMFLLIMLGFPINFLTLYVTVQHKKLRTPLNYILLNLAVADLFMVFGGFTTTLYTSLHGYFVFGPTGCNLEGFFATLGGEIALWSLVVLAIERYVVVCK--PMSNFFGENHAIMGVAFTWVMALACAAPPLWSRY-----IPEGMQCSCGI--DYYTPHEET-NNESFVIYMFVVHFIIPLIVIFFCYGQLVFTVKAATTQKAEKEVTRMVIIMVIAFLICWLPYAGVAFTHQGSDFGPIFMTIPAFFAKTSAVYNPVIYIMMNKQFRNCMVTTLCCGKN- |
4 | 3dqbA | 0.14 | 0.14 | 4.73 | 0.38 | CEthreader | | NKTGVVRSPFEAPQYYLAEPWQFSMLAAYMFLLIMLGFPINFLTLYVTVQHKKLRTPLNYILLNLAVADLFMVFGGFTTTLYTSLHGYFVFGPTGCNLEGFFATLGGEIALWSLVVLAIERYVVVCKPMSN-FRFGENHAIMGVAFTWVMALACAAPPLVGWSRYIPE---GMQCSCGI---DYYTPHEETNNESFVIYMFVVHFIIPLIVIFFCYGQLVFTVKEAAAQKAEKEVTRMVIIMVIAFLICWLPYAGVAFYIFGSDFGPIFMTIPAFFAKTSAVYNPVIYIMMNKQFRNCMVTTLCCGKN- |
5 | 1f88A | 0.15 | 0.15 | 4.99 | 1.45 | MUSTER | | NKTGVVRSPFEAPQYYLAEPWQFSMLAAYMFLLIMLGFPINFLTLYVTVQHKKLRTPLNYILLNLAVADLFMVFGGFTTTLYTSLHGYFVFGPTGCNLEGFFATLGGEIALWSLVVLAIERYVVVCKPMSNF-RFGENHAIMGVAFTWVMALACAAPPLVGWSRYIP---EGMQCSC---GIDYYTPHEETNNESFVIYMFVVHFIIPLIVIFFCYGQLVFTVKEAAASATTQKAEKEVTRMVIIMVIAFLICWLPYA-HQGSDFGPIFMTIPAFFAKTSAVYNPVIYIMMNKQFRNCMVTTLCCGKNP |
6 | 6kp6A | 0.19 | 0.17 | 5.53 | 1.32 | HHsearch | | -------------------TVEMVFIATVTGSLSLVTVVGNILVMLSIKVNRQLQTVNNYFLFSLACADLIIGAFSMNLYTVYTIKGYWPLGAVVCDLWLALDYVVSNASVMNLLIISFDRYFCVTKPLTYPARRTTKMAALMIAAAWVLSFVLWAPAILFWQFVVGKR-TVPDNQCFAQFLS---------NPAVTFGTAIAAFYLPVVIMTVLYIHIYLASRSRVHGARERKVTRTIFAILLAFILTWTPYNVMVLVNTFCCIPDTVWSIGYWLCYVNSTIRPACYALCNAEFKKTFRHLLLCQ--- |
7 | 3emlA1 | 0.19 | 0.17 | 5.53 | 2.41 | FFAS-3D | | ----------------------SSVYITVELAIAVLAILGNVLVCWAVWLNSNLQNVTNYFVVSLAAADIAVGVLAIPFAIT--ISTGFCAACHGCLFIACFVLVLTQSSIFSLLAIAIDRYIAIRIPLRYNGLVTGTRAKGIIAICWVLSFAIGLTPMLGWNNCGQSQGCGEGQVACLFEDV--------VPMNYMVYFNFFACVLVPLLLMLGVYLRIFLAARRQLVHAAKSLAIIVGLFALCWLPLHIINCFTFFCPDCSHAPLWLMYLAIVLSHTNSVVNPFIYAYRIREFRQTFRKIIRSHVLR |
8 | 6oijR | 0.17 | 0.16 | 5.10 | 0.95 | EigenThreader | | -----------------PWQ--VAFIGITTGLLSLATVTGNLLVLISFKVNTELKTVNNYFLLSLACADLIIGTFSMNLYTTYLLMGHWALGTLACDLWLALDYVASQASVMNLLLISFDRYFSVTRPLSYRAKRTPRRAALMIGLAWLVSFVLWAPAILFWQYLVGERTVLAGQCYIQFLSQ----------PIITFGTAMAAFYLPVTVMCTLYWRIYRETENRARELAALQAARTLSAILLAFILTWTPYNIMVLVFCKDCVPETLWELGYWLCYVNSTINPMCYALCNKAFRDTFRLLLLCRWDK |
9 | 4ww3A | 0.17 | 0.16 | 5.10 | 1.68 | CNFpred | | --------------------AVYYSLGIFIGICGIIGCGGNGIVIYLFTKTKSLQTPANMFIINLAFSDFTFSLVNGPLMTISCFLKKWIFGFAACKVYGFIGGIFGFMSIMTMAMISIDRYNVIGRPMAASKKMSHRRAFIMIIFVWLWSVLWAIGPIFGWGAYTLEG---VLCNCSFDYISRD-----STTRSNILCMFILGFFGPILIIFFCYFNIVMSVSNHEKEM-EMRLAKISIVIVSQFLLSWSPYAVVALLAQFGPVTPYAAQLPVMFAKASAIHNPMIYSVSHPKFREAISQTFPWVLTC |
10 | 3capA | 0.15 | 0.14 | 4.72 | 1.33 | DEthreader | | ---GPNFSPFEAPQYYLAEPWQFSMLAAYMFLLIMLGFPINFLTLYVTVQHKKLRTPLNYILLNLAVADLFMVFGGFTTTLYTSLHGYFVFGPTGCNLEGFFATLGGEIALWSLVVLAIERYVVVCKPMSN-FRFGENHAIMGVAFTWVMALACAAPPLVGWSRYIP-----MQCSCGIDY-YT--PHEETNNESFVIYMFVVHFIIPLIVIFFCYGQLVFTVKEAATQKAEKEVTRMVIIMVIAFLICWLPYAGVAFYIQGSDFGPIFMTIPAFFAKTSAVYNPVIYIMMNKQFRNCMVTTLCCGKN- |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Download alignment lists the threading program used to identify the template, and provide the 3D structure of aligned regions of threading templates (threading[1-10].pdb.gz). |
(f) | Template residues identical to query sequence are highlighted in color. |
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