>A0A286YFB4 (120 residues) MGCCGCGGCGGCGGRCGGCGGGCGGGCGGGCGGGCGGGCGGGCGGGCGGGCGGSCGSCTT CRCYRVGCCSSCCPCCRGCCGGCCSTPVICCCRRTCHSCGCGCGKGCCQQKCCCQKQCCC |
Sequence |
20 40 60 80 100 120 | | | | | | MGCCGCGGCGGCGGRCGGCGGGCGGGCGGGCGGGCGGGCGGGCGGGCGGGCGGSCGSCTTCRCYRVGCCSSCCPCCRGCCGGCCSTPVICCCRRTCHSCGCGCGKGCCQQKCCCQKQCCC |
Prediction | CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC |
Confidence | 986678876786788887777767876887578767876777687757764688877435666567654787875357768754788542236865655676477867886536885359 |
H:Helix; S:Strand; C:Coil | |
Sequence |
20 40 60 80 100 120 | | | | | | MGCCGCGGCGGCGGRCGGCGGGCGGGCGGGCGGGCGGGCGGGCGGGCGGGCGGSCGSCTTCRCYRVGCCSSCCPCCRGCCGGCCSTPVICCCRRTCHSCGCGCGKGCCQQKCCCQKQCCC |
Prediction | 751142421332434243244314331443135314541433144414432453343233443243333453353043214231645142304431542313144413554133565158 |
Values range from 0 (buried residue) to 8 (highly exposed residue) | |
Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Downloadalignment | 20 40 60 80 100 120 | | | | | | | |||||||||||||
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SS Seq | CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC MGCCGCGGCGGCGGRCGGCGGGCGGGCGGGCGGGCGGGCGGGCGGGCGGGCGGSCGSCTTCRCYRVGCCSSCCPCCRGCCGGCCSTPVICCCRRTCHSCGCGCGKGCCQQKCCCQKQCCC | |||||||||||||||||||
1 | 5ml1A | 0.36 | 0.28 | 8.18 | 1.96 | SPARKS-K | VFGAGCTVCKQCGCATSGCNCTDDCKCQSCKY---GAGCTDTCQTPCG--CGSGCN------------CKEDC-RCQSCSTACK-----------CAAGSCKCGKGCGPDSCKCDRSCSC | |||||||||||||
2 | 5ml1A | 0.37 | 0.26 | 7.67 | 1.29 | CNFpred | ---------------------------------GCTDVCKQPCGCATGCNCTDDC-KCQSCK-YGAGCTDTCKQTPCGCGSGCNC-KEDCRCQ-KCAAGSCKCGKGCTGPSCKCDRSCSC | |||||||||||||
3 | 3c9vN | 0.06 | 0.06 | 2.56 | 1.03 | MapAlign | --LKALSVPCSDSKAIAQVGTISANSDETVGKLIAEAMDKVGKEGVITVEDGTGLQDELDVVEGMGQAKRVVINKDTTTIIDGVGVAVIKVGAAGDGNYGYNAATEEYGNMIDMGILDPT | |||||||||||||
4 | 5ml1A | 0.35 | 0.28 | 8.20 | 1.53 | MUSTER | -GSMSSVFGAGCTDVCKQCASGCNCTDDCKCQSCKYGGCTDTCQTPCG--CGSGCN------------CKEDCRCQS--CSTACK----------CAAGSCKCGKGCGPDSCKCDRSCSC | |||||||||||||
5 | 6w1sI | 0.67 | 0.30 | 8.55 | 1.64 | HHsearch | GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG------------------------------------------------------------------ | |||||||||||||
6 | 7jjvA | 0.26 | 0.23 | 7.21 | 1.92 | SPARKS-K | AGASGLAGGPNCNGGKGGKGAPGVGTAGG--AGGVGGAGGTGNTNGGAGGSGGNSDVAAGGAGAAGGAAGGAGTGGTGGNGGAGKPGGAPGAGGAGTPAGSAGSPGQTTVL--------- | |||||||||||||
7 | 5mn3A | 0.39 | 0.29 | 8.62 | 1.12 | CNFpred | ----------GCTDTCKQTPCGCGSGC------NCKEDCRCSCKYGA--GCTDVCKQ-TPCGCATSGNCTDDCKCQ-SCSTAC-----------KCAAGSCKCGKGCTGPSCKCDRSCSC | |||||||||||||
8 | 2m74A | 0.30 | 0.28 | 8.59 | 1.21 | MUSTER | -SARGGGGHDALK-GPNVCGSRYNAYCCPGKTLPGGNQCIPICRHSCGDG---FCSRPNMCTCIAPSCGSRSIQHCNIRCGGSCSD--HCLCQKIGTHCGQVCESGCLNGRCVAPNRCAC | |||||||||||||
9 | 6w1sI | 0.68 | 0.28 | 8.07 | 1.52 | HHsearch | GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG---------------------------------------------------------------------- | |||||||||||||
10 | 3boiA | 0.31 | 0.21 | 6.30 | 1.53 | SPARKS-K | -------CKGADGAHGVNGCPGTAGAAGSVGGPGCDGGHGGNGGNGNPGCAGGVGGAGGASGGTGVG----------GRGGKGGSG----------TPKGADGAPGAP------------ | |||||||||||||
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Top 10 structural analogs in PDB (as identified by
TM-align)
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Top 5 enzyme homologs in PDB
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Template proteins with similar binding site:
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References: | |
1. | Wei Zheng, Chengxin Zhang, Yang Li, Robin Pearce, Eric W. Bell, Yang Zhang. Folding non-homology proteins by coupling deep-learning contact maps with I-TASSER assembly simulations. In preparation, 2020. |