Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Downloadalignment | | 20 40 60 80 100 120 140 160 180 200 220 240 260 280 300 320 340 360 380
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| SS Seq | CCCCHHHHHHHHHHHHHHHHHHHHHHHCCSSSCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCCCCHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHSSSSSSSSSSSCCCCCSSSCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC MKWSVRGACAALSSCLLLACALSAAAVGLKCFSLGSELRGEPFRLGAAAGAFYSGLLLAAGLSLLGAALLCCGPRDAPLAGSEPGPGLGVPAAPAGAPEATPGESGAAAGAPGPVSSQNLLLLGVLVFMLGVLSAFAGAVIDGDTVSLVERKYSHYCLPPRAPGSSPGSAPGSTPGSAPGSAPGSAPGSAPGAPRARSTLDSATSAKCRQLKDYQRGLVLSTVFNSLECLLGLLSLLLVKNYKSSQARRGRRGRRRGGRALARPRGGSGLRAQPPASRARRGRRGRRGRRLQQRPSEASILSPEESDLAAPGDCAGFAAHHAVSYINVGVLHALDEAGAEVRCGGHPSVELPGYAPSDPDLNASYPYCCRPPCETPRPWETHRAC |
1 | 5oy5A | 0.07 | 0.07 | 2.82 | 0.54 | CEthreader | | LLIKILPHLDPTAEGMPVAVRCRIGNPSTEYDGLMHRPPEGGLIIELERAGPPIDLSGTLAPALERIRTAGSLRALCDDTALLFQQCTGYDRVMVYRFDEQGHGEVFSERHVPGLESYFGNRYPSSDIPQMARRLYERQRV--RVLVDVSYQPVPLEPRLSPLTGRDLDMSGCFLRSMSPIHLQYLKNMGVRATLVVSLVVGGKLWGLVACHHYLPRFIHFELRAICELLAEAIATRITALESFAQSQSELFVQRLEQRMIEAITREGDWRAAIFDTSQSILQPLHADGCALVYEDQIRTIGDVPSTQDVREIAGWLDRQPRAAVTSTASLGLDVPELAHLTRMASGVVAAPISDHRGEFLMWFRPERVHTVTWGGMGDTPADLS |
2 | 6thkA | 0.07 | 0.07 | 2.87 | 0.62 | EigenThreader | | QKNIYYPVRSIFEQGTKEKKEINKKVSDQVDGLLKQITQGKREATRQERVDVMSAVLHKMESDLEGYKKTFTKGPFIDYEKQSSLSIYEAWVKIWEKNSWEERKKYPFQQLVRDELERAVAYYKQDSLSEAVKVLRQELNKQKALKEKEDLSQLERDYRTRKANLQMKVQSELDQAGSALPPLVSPTPEQWLERATRLVTQAIADKKQLQTTNNTLIKNALQDAIKFTADFYKEVTEKFGARTSEMARQLAEGARGKNIRSAFDSLDKQMMAKSLEKFSKGFGVVGK---AIDAASLYQEFKISTETGDWKPFFVKIETLAAGAAASWLVGIAFATATAT----PIGILGFALVMAVTGAMIDEDLLEKANNLVISILEHHHHH- |
3 | 6hwhb | 0.16 | 0.12 | 3.91 | 0.58 | FFAS-3D | | --LFVRQVHHWAALMFAASIMVHLARI----FFTGA--FRRPREANWVIGSLLLILAMFEGLSGTGIRAALSGIMGIPVIGTWGGDFPGQKHTQFPGPGRTETNVVGVRVMPVFAVKS----GAFFAMITGVLGLMGGLLTINPIWN----------LGPYKPSQVSAGSQPDWPAWEFYPFGHTIPQKVTGDDAHHNLLQRPRDVPVRTAIGSMAIALYLLLGRIGMVVLPAIVYFVAYRWAISLQRSDRHGVETG--IIKRLPHGAYVELHQPLGPVDEIPLEYAGAPLPKRMNKLGSGGAPGTGSFLFPD------------------------------------------------------------------------ |
4 | 4btgA | 0.12 | 0.11 | 4.07 | 0.88 | SPARKS-K | | GKVPPTAILEQLRTHHITTDFVCHVLSPLGFILPDAAY---VYRVGRATYPNFYALVDCVRASDLRRMLTALSSVDSKMLQATFKAKGALAPAANAATTAF--ERSRGNFDANAVVSSVLTILGRLWQLRSNLALFIAMVKQRGRAEVIESEVSPFKLRPSAIDHMGQPSHVVVYEDWQFAKEITAFTPVKLANNSNQRFLDVEPGISDRMSATLAPIFVKNRTAVYEMTLGFPSVVERDYALMVAIAALRTGIVDESLEARASNDLKRSMFNYYAAVMHYAVAHNPEVVVGVAAEQGSLNVRTELRIP-VGYNAIEGGSIRTPEPLEAIAYNKPQPSEVLQAKVLDSIHIWPWHEASTEFAYEDAYSVTIRNKRYTAEVKEFEL |
5 | 3rkoB | 0.11 | 0.03 | 1.12 | 0.97 | CNFpred | | ------PVSALIHAATMVTAGVYLIARTHGLFLM--------------TPEVLHLVGIVGAVTLLLAGFAALVQ----------------------------------------TDIKRVLAYSTMSQIGYMFLALGVQ-------------------------------------------------------------------------AWDAAIFHLMTHAFFKALLFLASGSVILAC----------------------------------------------------------------------------------------------------------------------------------------------- |
6 | 6wm2R2 | 0.06 | 0.04 | 1.65 | 0.67 | DEthreader | | YREINPAPYTIITFPFLAFYTGLIYNDCKSLNSSWSVRLLIATNKLFLNSFKMKMSVILGIIHMLFGVSLSL-FN-HI-----------------YFKK-----------PLNIYFGFIPEIIFMTSLFGYLVLI-WSLLIINMFLLVVALLCVPWMLLFK-------PLVLRRQYLRRK----------------F-DF-GDTMVHQAIHTIEYCLGCISNTASYLRLWALSLAHAQLEVLMVIHIG-----L-------SV----------------KSL---A--GGLVLFFFFTAF-A------------------TLTVAILL------------IMEG--------------------LSAFLHAL------------- |
7 | 2rdyA | 0.07 | 0.07 | 2.75 | 0.84 | MapAlign | | --AELHKPLIHFIERLAANGKKTAEINYGWVAHHNADLWGQTAPVPGGVWLTQHLWEHYTFGYLRDAYPIKEAALFCLDWLIENEAGYLVTSPSTSPEQRFRIGEKGYAVSSATTDLSLIAECFDNCIQAAKRLSID---------EDFVKALSDAKQRLLPLQIGKRGQLQEWSNDFEDEDVHHRHVSHLVGIYPGRLITEQSAPNLFEAAKTSLEIRGDEGTGWSLGWKISLWARFKDGNRCERLLSNLTLIKEDESQHRGGVYANLFGAH----------------PPFQIDGNFSATAGIAELLQSHQGYLEFLPALPDSWKDGYVKGLRGRGGYEVDLAWTNGVEIVSTKTQTCEVLTRISRITESGEEVEGDVLDSGRS |
8 | 2nbiA1 | 0.19 | 0.17 | 5.52 | 0.56 | MUSTER | | NPSSQPSECAVLEECPIDECFLSDASRPPSCLSFGRPVLPTPQNINCPRCCATE-----------------CRPDNPMFTPSPDGSPPICSPTMLPTNQPTPPEPSSAPSDCGEVIEECPLDTCFLPTS-RPPDCTAVGRPDCDVLPFPNNLGCPACCPFECSPDNPMFTPSPD-GSPPNCSPTMLPTPQPSTPTVITSPAPSSQP--SQCAEVIEQCPI-------ECFLPYGDSSRPLDCTDPAVNRPDCDVLPTPQNINCPACCA-FECRPDNPMFTPSPDGSP-------PICSPTMMPSPEPSSQPSDCGEVIEECPID-----CFLPKSDSARPPDCTGRPDCNLP--FPNNIGCPSCCPFECSPPMFTPSPDGSPPNC |
9 | 2pffB | 0.22 | 0.18 | 5.58 | 0.82 | HHsearch | | MDYSTRPLSGSLEHVLLVKNYITARIMAKRPFDKKSNSA--LFRAGNANTDDYFEELRDLYQVLV-GDLIKFSAETSELIRTTLDAKVFTQGEWLENPSNTPDKDYL---LSIPISCPLIGVIQLAHYVVTKLLGFTGAVAIAETDSWESFFVSVRCYEAY-PNTS-----------LPPSILEDS--LENNEGVPSPMLS-ISNLTQEQVQDYVSHLPAGQVEISPQSLY-GLNLTLRKAKAPSGLDQS----------------------RIPFSER----------KLKFSNRFLPVASPFHSHLLPASDLINNVSFNA-KDIQIPVYDTFDGSDLRVLSGSIS----------ERI-----VDC---IIRLPVKWETTTQF |
10 | 3eo7A | 0.08 | 0.08 | 3.00 | 0.48 | CEthreader | | AIDLKPYLQETPDTNGQWWQRLSRLLFRSYGLTARPSGNTVYLRAAPSAGGLYP----------AEVYVVSRGTPLLSPGLYNYQCRTHSLIHYWESDVWQSLQEACFWHPALESTQLAIIVTAVFYRSAWRYEDRAYRRICLDTGHLLGNIELSAAITDYRPHLIGGFIDEAVNDLLYIDPLQEGAIAVLPLADLL---DIQQNISPGCTALPSATETNYPQVPDGELLKYFHHHTQISASITGLEDKYNFPFCLKISTVSAPIYWGENLSDLEITHKRRSTRAYNGEELTFDEFTYQPQNYIDQSLDNSPDYFDLNLIETFIAVCAGCYYYAPKAQELRQIRFKNFRRELHFLCLGQELGRDAAAVIFHTSDLKSAIAQYGDR |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Download alignment lists the threading program used to identify the template, and provide the 3D structure of aligned regions of threading templates (threading[1-10].pdb.gz). |
(f) | Template residues identical to query sequence are highlighted in color. |
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