>A0A1B0GVD1 (139 residues) MCFATRRWFYLHLGCMMLINLVNADFEFQKGVLASISPGITKDIDLQCWKACSLTLIDLK ELKIEHNVDAFWNFMLFLQKSQRPGHYNVFLNIAQDFWDMYVDCLLSRSHGMGRRQVMPP KYNFPQKITGGNLNVYLRE |
Sequence |
20 40 60 80 100 120 | | | | | | MCFATRRWFYLHLGCMMLINLVNADFEFQKGVLASISPGITKDIDLQCWKACSLTLIDLKELKIEHNVDAFWNFMLFLQKSQRPGHYNVFLNIAQDFWDMYVDCLLSRSHGMGRRQVMPPKYNFPQKITGGNLNVYLRE |
Prediction | CCCHHHHHHHSHHHHHHHHHHHCCCHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHSSCCCCCCCCSCCCCCCCCHHHHCCCCCCCSSCC |
Confidence | 9523432220110043213333156255406432469402213786787653478886426652232789999999998279976258999999999999987521235677511036754333466437664411149 |
H:Helix; S:Strand; C:Coil | |
Sequence |
20 40 60 80 100 120 | | | | | | MCFATRRWFYLHLGCMMLINLVNADFEFQKGVLASISPGITKDIDLQCWKACSLTLIDLKELKIEHNVDAFWNFMLFLQKSQRPGHYNVFLNIAQDFWDMYVDCLLSRSHGMGRRQVMPPKYNFPQKITGGNLNVYLRE |
Prediction | 7433243302030101000101334152355234514453266134511531331123145151553041213012104527536223001300431130102001245343244414656451354245453532358 |
Values range from 0 (buried residue) to 8 (highly exposed residue) | |
Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Downloadalignment | 20 40 60 80 100 120 | | | | | | | |||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
SS Seq | CCCHHHHHHHSHHHHHHHHHHHCCCHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHSSCCCCCCCCSCCCCCCCCHHHHCCCCCCCSSCC MCFATRRWFYLHLGCMMLINLVNADFEFQKGVLASISPGITKDIDLQCWKACSLTLIDLKELKIEHNVDAFWNFMLFLQKSQRPGHYNVFLNIAQDFWDMYVDCLLSRSHGMGRRQVMPPKYNFPQKITGGNLNVYLRE | |||||||||||||||||||
1 | 5vjcA2 | 0.07 | 0.05 | 2.06 | 0.51 | CEthreader | ---------PFVKVFGYVMEGLKSK-------------------NARQRTECLDELTFLIESYGMNICQSAVREIARQISDRDNSVRNAALNCIVQVFFLSGEKTYKMIGHLNEKDLSMLDERIKR------------- | |||||||||||||
2 | 4l7tA | 0.05 | 0.05 | 2.36 | 0.58 | EigenThreader | INLMIAKTKETGKNYYLGEAYGMRAYLYFHLLRSWGDVSPAEEVMKQIKEDITASEKGFGSDYYWSMAATQMLKGEVYLWSGRQMDYTTAKTALQSIVSNADDRFRQNLVPQNGLIRLGDTNKYQGVLLDGASQRSFLN | |||||||||||||
3 | 4y21A1 | 0.19 | 0.19 | 6.01 | 0.50 | FFAS-3D | -ASSPERLQDLKSTVDLLTSITF----FRMKVQELQSPPRASQVVKDCVKACLNSTYEYIFNNCHELYGDFWSKLITLIVNQFPQELNVGKISAEVMWSLFQDMKYAMEEHDKHRLCKSADYMNLHFKVKWLYNEYVAE | |||||||||||||
4 | 7dxjA | 0.15 | 0.15 | 5.06 | 0.64 | SPARKS-K | DLFGDAALYSLPTLARALAQYLVVVSKLPSHHLPPEKEKDIVKFVVATLEALSWHLIHEQIPLSLDLQAGLDCCCLALQL---PGLWSVVVTHACSLIHCVHFILEAVAVQPGEQLLSNPKYITAACEMVAEMVESLQS | |||||||||||||
5 | 3gi9C | 0.09 | 0.06 | 2.23 | 0.63 | CNFpred | ------EAVSMAVGVMIGASIFSIFGVGAK----IAGRNLPEILSGIYALLVAYSYTKLGA---IVSNAGPIAFIHKAIGD---NIITGALSILLWMSYVISIALFAKGF----------------------------- | |||||||||||||
6 | 6kiiA | 0.06 | 0.05 | 2.14 | 0.83 | DEthreader | --------------V--WGATLYHLK-E----LPFPIEKLPELFNRKQVEQK-SVI--YPPYTPEWGCLSPRWIYQQVQDYQVKNSTYWLVFELLWRDYFRFICLKHG--PKVFYQAEFESVLID--S--YDPMGDPDG | |||||||||||||
7 | 3gt5A | 0.09 | 0.09 | 3.31 | 0.74 | MapAlign | AYLQFGTAEYLDAVHHGLSYVRDVHRNPATGGYAWTLCDDRVEDDQRYLERALVLADRITFRPWGFQPGHQTEWAKLLLLDRYEWLVPVARSLFDVAVARAAAALLATRSGDYWQWYDRLWAYAWQHMVDHRYGAW--- | |||||||||||||
8 | 4fgvA | 0.09 | 0.09 | 3.30 | 0.56 | MUSTER | TGGPGQPHTYDEQLIKMFTEVLTTISNIIPLQMDLKATYPSNSRDQEFIQNLALFLTSFFTLPNRDFLTHGHFYLIRISQIDD----REIFKICLDYWLKLVQELYEEMQSLPLNDMSSMGLGMMSGGGAPNPALLEHY | |||||||||||||
9 | 1vt4I3 | 0.10 | 0.09 | 3.19 | 0.93 | HHsearch | SDDLIPPYLDQYFYSHIRMTLFRMVFLDFRF---------LEQKDSTAWNASGSILNT----------LQQLKFYKPYICDNDPKYERLVNAILDFLPKIEENLICSKYTDLLRIALMAEDEAIFEEAHQVQRGGGGGG | |||||||||||||
10 | 1dl2A2 | 0.11 | 0.11 | 3.91 | 0.49 | CEthreader | DVYGPIEHTSHNMPRGNQPLGWIIVDSVDTLMLMYNSSTLYKSEFEAEIQRSEHWINDVLDFDIDETTIRMLGGLLSAYHLSDVLNKTVYLNKAIDLGDRLALAFLSTQTGIPYSSINLHSGQAVKNNMESFWLAETLK | |||||||||||||
|
|
Top 10 structural analogs in PDB (as identified by
TM-align)
|
|
Top 5 enzyme homologs in PDB
|
Template proteins with similar binding site:
|
References: | |
1. | Wei Zheng, Chengxin Zhang, Yang Li, Robin Pearce, Eric W. Bell, Yang Zhang. Folding non-homology proteins by coupling deep-learning contact maps with I-TASSER assembly simulations. In preparation, 2020. |