Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Downloadalignment | | 20 40 60 80 100 120 140 160
| | | | | | | | |
| SS Seq | CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCSSSSHHHSCCCCCCCCCCCCCCCC MSRQLNIDALRQNFWKEEYLREKMLRCEWYRKYGSMVKAKQKAKAAARLPLKLPTLHPKAPLSPPPAPKSAPSKVPSPVPEAPFQSEMYPVPPITRALLYEGISHDFQGRYRYLNTRKLDMPETRYLFPITTSFTYGWQLGPPVKQELVSCKMCRIESFFRKNGAFALLDPRDLAL |
1 | 6xmfA1 | 0.10 | 0.10 | 3.74 | 1.06 | SPARKS-K | | SRLKDYQPAHRMILAKVAAEWIESRYRRAHQNWERNYEEWKKEKQEWEQNH--PELTPEIREAFNQIFQQLEVKPAARLLQNKDNCQYKNKHSHTALCKQYQQQLSHDELYRKWRREYWREPRKPFRYPHSIAKIFGENYFQADFKN--SVVGLRLDSMYLEFAFAPWPRNYRPQP |
2 | 1vt4I | 0.17 | 0.16 | 5.22 | 1.06 | HHsearch | | MSKD-AVSGTLRLFWTLMVQKEEVLRINYKFLMSPIKTEQRQPSNVLRTVLEDPNIQAEVLLN-VQNAKAFNSFLSTTTHISLDHHSMTLTPDEVKSLLLK-----------YLDCRPQDLPRESIRDGLESSFD-RLSVFPPSAHVIKSDVMVVVNKLHKYSLVEKQPKESTISI |
3 | 4tnbA | 0.05 | 0.05 | 2.23 | 0.44 | CEthreader | | KYLTPKSPVFIAQVGQDLVSQTEEKLLQKPCKELFSACAQSVHEYLRGEPFHEYLDSMFFDRFLQWKWLERQPVTKNTQVRATGKMYACKRLEKKRIKKRKGESMALNEKQILEKVNSQFVVNLAYAYETKDALCLVLTIMNGLCGLEDLHHENTVYRDLKPENILLDDYGHIRIS |
4 | 4ddtA | 0.06 | 0.06 | 2.65 | 0.62 | EigenThreader | | TDPDVEGEKISWDVTQYLLYGFKKARESNLVKAQIVRRVQDRWIGFELSGKLQKRFGRSNLSAGRVQSTVLGWIVEREEEYKKSPLPPYTTSSALSEISQKLRLGVQEVMDILQDLFEKGFITYHRTDSTRISEGAHEAIRPVKPIDARELEEMIEEG------LIADLTKKHLRV |
5 | 3j65r | 0.15 | 0.14 | 4.81 | 0.46 | FFAS-3D | | MSSTQDSKAQTLNSNPEILLRKRRNADRTRIERQELAKEKERIKRVSILEDKKAKNETQHIASGKDNSVDLEETEEEEDDGLIREKTTYDIPNKAFKILNTGFVKLTKNVYPLLK---VIAPYVVIGKPSLSSQKRGRIIYKGENEAEPHEIVLNDNNIVEEQGDHGIICVEDII- |
6 | 6ybtu | 0.08 | 0.06 | 2.28 | 0.97 | SPARKS-K | | ----QTIEERKERLESLNIQREKEELEQREAELQKVRKAEEERLRQEAKEREKERILQEHEQIKKKTVRERLEQIKKTELGAFKDIDIEDLEELDPDFIMAKQVEQLEKEKKELQERLKNQEKKIDYFERAKRLEE---------------------------------------- |
7 | 3sidA | 0.05 | 0.02 | 0.83 | 0.54 | CNFpred | | ---------GLRRALETALEVETIESQKTYPAFAKLAAEQG--------------------------------------------------NMEVATAFEAIVK-SETKHANWVKRALENLLEVA--------------------------------------------------- |
8 | 6rwbA | 0.06 | 0.05 | 1.96 | 0.83 | DEthreader | | --TLFPPEHPMYKALKLEVSNLEKSKIQLEGKKKEEEIKLEQAKDNIQSLINNDSENSRFEAEKVNLSPTSTEVK--------LADYIDLRYNKTELFNFYLYLLKIGAFSGIFWEPWDKNTDDPDVIA---PMQYKL-------QAEN--------------------------- |
9 | 1vt4I | 0.02 | 0.02 | 1.56 | 0.79 | MapAlign | | SILNTLQQLKFYKPYICDNDPKYERLVNAILDFLPAIFEEAHKQVQGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG--GG---GGGGGGGGGGG-----GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG |
10 | 3qc7A | 0.13 | 0.11 | 3.77 | 0.54 | MUSTER | | EVEDIKAGDTGKRLLKI--NTPSGARNIIIENEDAKALINGETTNTNKKNLQ-------DLLFSDGNVKAFLQATTTDENKTALQQ-LLVSNADVLGLLSGNPTSDNKINLRTMIGAGVP-----YSLPAATTTTLG-KKGAAVTASTATDVATAVKDL-KNAGIISL-------- |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Download alignment lists the threading program used to identify the template, and provide the 3D structure of aligned regions of threading templates (threading[1-10].pdb.gz). |
(f) | Template residues identical to query sequence are highlighted in color. |
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