Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Downloadalignment | | 20 40 60 80 100 120 140 160 180 200 220 240 260 280 300 320 340 360 380 400 420
| | | | | | | | | | | | | | | | | | | | | |
| SS Seq | CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCC MLYAKPPPTINGIKGLQRKERLKPAHIHLQQLTCFSITCSSTMSYSCCLPSLGCRTSCSSRPCVPPSCHGYTLPGACNIPANVSNCNWFCEGSFNGSEKETMQFLNDRLASYLEKVRQLERDNAELEKLIQERSQQQEPLLCPSYQSYFKTIEELQQKILCAKAENARLVVNIDNAKLASDDFRSKYQTEQSLRLLVESDINSIRRILDELTLCKSDLESQVESLREELICLKKNHEEEVNTLRSQLGDRLNVEVDTAPTVDLNQVLNETRSQYEALVETNRREVEQWFATQTEELNKQVVSSSEQLQSCQAEIIELRRTVNALEIELQAQHNLRDSLENTLTESEAHYSSQLSQVQSLITNVESQLAEIRCDLERQNQEYQVLLDVRARLECEINTYRSLLESEDCKLPCNPCATTNASGNSCGPCGTSQKGCCN |
1 | 6yvuB | 0.13 | 0.10 | 3.32 | 1.65 | FFAS-3D | | ----------------------------------------------------------------------------------------------IEERMGQIENLNEVCLEKENRFEIVDREKNSLESGKETALE--FLEKEKQLTLLRSKLLQSNSKLASTLEKISSSNKDLEDEKMKFQESLKKVDEIKAQRKEIKDRISSCSSKEKTLVLERRELEGTRVSLEERTKNLVSKMEKAEKTLKSTKHSISEAENMLEELRGQQTEHETEIKDLTQLLEKERSILDDIKLSKTKNISAEIIRHEKELEPWDLQLQEKESQIQLAESELSLLEETQAKLKKNVETLEEKIKTHKQELQDLILDLKKKLNSLKDERSQGEKNFTSAHLKLKEMQKVLNAHRQRAMEARSSL--------------------------- |
2 | 6yvuA | 0.07 | 0.07 | 2.92 | 1.11 | MapAlign | | -QDLIYKRGQAGVTKASVTIVFDNTDKSNSPIGFTNSPQISVTRQGTSKYLINGHRAPQQSVLQLFQSVQLNINNPNFLIMQGEYYNIKHKHTSIRETLENGETRMKMLNEFVKKTSEEIDSLNEDVEEIKLQKEKELHKSKLENKENGLLNEISRLKTSLSIKVENLNDTTEKSKALESEIASSSAKLIEKKSAYANTEKDYKMVQEQLSKQRDLARNEEILRDIGECENEIKTKQMSLKKCQEEVSTIEKDMKEYDSSKLNELKKELKLLAKELEEQESESERKYDLFQNLELETEQLSSELDSNKTLLHNHLKSIESLKLENSDLEGKIRGVEDDLVTVQTELNEEKKRLMDIDDELNELETLIKKKQDEKKSSELELQKLVHDLNKYKSNTNNMEKIIEDWEKVTLDFGNIFADLLPNSFAKLVPCEGKDVT |
3 | 5j1iA | 0.12 | 0.09 | 3.10 | 1.29 | SPARKS-K | | ----------------------------------------------------------------------------------------------------------SRCQRCISELKDIRLQLEACETRTVHRLRLPLDEPARECAQRIAEQQKAQAEVEGLGKGVARLSAEAEKVLAAAPTLRSELELTLGKLEQVRSLSAIYLEKLKTISLVIRGTQGAEEVLRAHEEQLKEAQLPELEATKASLKKLRAQAEAQ---QPTFDALRDELRGAQEVGERLQQRHVERWRERVAQLLERWQAVLAQTDVRQRELEQLGRQLRYYRESADPLGAWLQDARRRQEQIQAMDSQAVREQLRQEQALLEEIERHGEKVEECQRFAKQYINAIKDYELQLVTYKAQLESVIQEYVDLRTHYSELTTLTSQYIKFISET--- |
4 | 6yvuB | 0.11 | 0.11 | 3.81 | 1.28 | HHsearch | | LDRLRQPISTPENVPRKPNPKFSNAFYSVLRDTL---------VAQNLKQANNVAYKRFRVVTVDGKL---IDISGTMSGGGNHVAGLMKLKV-DDYTPEEVDKIERELSERENNFRVASDTVHKLRDHEP-DLESQISKAEMEADSLASELTLAEQQVKEAEMAYVKAVAQLNVVMKNLERLRGEYNDLQSETKTKKEKIKGLQDEIMKINSKVESVCQKLDILVAKLKKVKSASGGDVVKFQKLLQNSRDVELSSDELKVIEEQLKHTKLALAENDT----NMN-ETLNLKVELKEQSEQLKEQMEDMEESINEFKSIEIEMKNKLEKLNSLLTYIKSEITQQEKGTELDVELIESKINELSYYVEERLAEFKRRKLDLNNAVQKRDEVKEQLGILKKTLKEMYQMITMGGNEELVDSLDPFEGFSVMPPKKRN |
5 | 2tmaA | 0.10 | 0.07 | 2.45 | 1.18 | CNFpred | | ----------------------------------------------------------------------------------------------MDAIKKKMQMLKLDKENALDRAEQAEADKKAAEDRSKQL--------EDELVSLQKKLKGTEDELDKYSEALKDAQEKLELAEKKATDAEADVASLNRRIQLVEEELDRAQERLATALQKLEEAEKAADESERGMKVIESRAQKDEEKMEIQEIQLKE----------AKHIAEDADRKYEEVARKLVIIESDLERAEERAELSE------------GKCAELEEEIKTVTNNLKSLEAQAEKYSQKEDKYE----EEIKVLSDKLKEAETRAEFAERSVTKLEKSIDDLEDELYAQKLKYKAISEELDHALNDMTSI------------------------ |
6 | 3jbrA | 0.09 | 0.09 | 3.35 | 1.00 | MapAlign | | VLFMVIIYAIIGLELFKGKMHKTCYYIGTDIVATVENEKPSPCARTGSGRPCTINGSECRGGWPGPNHGITHFDNFGFSMLTVYQCITMEGWTDVLYWVNDAPWIYFVTLILLGSFFILNLVLGVLSGEFTKEREKAQQLEEDVILIVALNTLSIASEHHNQPLWLFTIEMLLKMYGLGLRQYFMSICSGILELLLVESVLRCIRLLRLFKITLVASLLNSIRSIASLLLLLFLFIIIFALLGFPQALISVFQVLTGEDWNSVMYNGIVCIYFIILFVCGNYILLNVFLAIAVDNLILLSSAALAAEDPIRAESSVFTVEIVLKMTTYGAFLHKVVAVSLIEMAIFFIIYIILIAFFMMNIFVGFVIVTFQEQNVFDFLIVIGSIIDVFFRLFRVMRLIKLLSRIYAVIGMQMFGKIALVDGTNRNNNFQTFPQAV |
7 | 7kogB | 0.11 | 0.08 | 2.83 | 1.61 | FFAS-3D | | -----------------------------------------------------------------------------------------------AEAEETIESLNQKVIALEKTKQRLATEVEDLQLEVDRATEKKAKAIDKIIGEWKLKVDDLAAELDASQKECRNYSTELFRLKGAYEEAQEQLEAVRRENKNLADEVKDLLDQIGEGGRNIHEIEKQKKRLEVEKDELQAALEEAEAALEQEENKVLRSQLELSQVRQEIDRRIQEKEEEFENTRKNHQRALDSMQASLEAEAKGKAEALRMKKKLEADINELEIALDHANKANSEAQKTIKKYQQQLKDVQTALEEARDDAREQLGISERRANALQNELEESRTLLEQADRGRRQAEQELGDAHEQINELAAQAT-------------------------- |
8 | 1sjjA | 0.08 | 0.08 | 3.05 | 1.21 | SPARKS-K | | LENRAPENTMQAMQQKDFRDYRRLHKPPKVQEKCQLEINFNTLQTKL----------------RLSNRPAFMPSEGKMVSDINNAWGGLEQAEKGY--EEWLLNEIRRLERLDHLAEKFRQKASIHESWTDGKEAMLQQKLLKKHEAFESDLAAHQDRVEQIAAIAQELNEDSPSVNARCQKICDQWDNLGALTQKRREALERTEKLLETIDQLYLEYAKRAAPFNNWMEGAMEDLQEEIQGLTTAHEQFKA------TLPDADKERQAILGIHNEVSKIVQTTP-QEINGKWEHVRQLVPRRDQALMEEHARQQQNERLRKQFGAQANVIGPWIQTKMEEIHGTLEDQLNHLRQYEKSIVNYKPKIDQLEGDHQQIQEAMEHIRVGWEQLLTTIARTINEVENQILTRDAKGISQEQMNEFRASFNHFDRKKTGM |
9 | 5lm1A | 0.09 | 0.07 | 2.53 | 1.24 | SPARKS-K | | --------------------------------------------------------------------------------------AHEASSLYSEEKAKLLREMMAKIEDKNEVLDQFMDSMDAYSPQLMEKCAALSVRP-DTVRNLVQSMQVLSGVFTDVEASLKDIRDLLEEDELLEQKFQEAVITSKAELAEVRREWAKYMEVHEKASFTNSELHRAMNLHVGNLRLLSGPL----DQVRAALPTSPEDKAVLQNLKRILAKVQEMRDQRVSLEQQLRELIQKDDITASLEMKKLFEEQLKKYDQLKVYLEQNLAAQDRVLCALTEANVQYAAVRRVLSDLDQKWNSTLQTLVASYEAYEDLMKKSQEGRDFYADLESKVAALLERTQSTCQAREAARQQLLDRE--------------------------- |
10 | 6yvuA | 0.10 | 0.09 | 3.47 | 1.22 | HHsearch | | FNYTKPYPEASFVHGVQIDNRYATALQTCAGGRVTIIP-LDKIYTRPIAPGKVEPKIRARSITLQGD---VYDPEGTLSGGSRE-------SLL--VDIQKYNQIQKQIETIQADLNHVTEELQTQYATSQ-KTQSDLNLSLHKLDLIIARNEEILRDIGECENEIKTKQMSLKKCQEEVSTIEKDMKEYDSKLNELKKELKLLAKELEEQESESERKYDLFQNLELETEQLS----SELDSNKTLLHNH------LKSIESLKLENSDLEGKIRGVEDDVQTEL-NEEKKRLMDIDDELNELETLIKKKQDEKKSSELELQKLVHDLNKYRERSKQLNEKFQELRKNIMNMIENVEKKEAALKTMIKTIEKDKMKIQETISKLNEYKETLVKTWEKVTLDFGNIFADLLPNS---FAKLVPVTQGVKVKLGNIWS |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Download alignment lists the threading program used to identify the template, and provide the 3D structure of aligned regions of threading templates (threading[1-10].pdb.gz). |
(f) | Template residues identical to query sequence are highlighted in color. |
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