>A0A0G2JPB7 (96 residues) GLGSAPSIHMEGPGESGVQLVCTARGWFPEPQVYWEDIRGEKLLAVSEHRIQDKDGLFYA EATLVVRNASAESVSCLVHNPVLTEEKGSVISLPEK |
Sequence |
20 40 60 80 | | | | GLGSAPSIHMEGPGESGVQLVCTARGWFPEPQVYWEDIRGEKLLAVSEHRIQDKDGLFYAEATLVVRNASAESVSCLVHNPVLTEEKGSVISLPEK |
Prediction | CCCCCCSSSSSCCCCCCSSSSSSSCCCCCCCSSSSSCCCCCSCCCCCCSSSCCCCCCSSSSSSSSSSCCCCCSSSSSSSSCCCCCCSSSSSSCCCC |
Confidence | 988886799981689939999993381468678997799986478661245289982899999999478998089999937789807999982699 |
H:Helix; S:Strand; C:Coil | |
Sequence |
20 40 60 80 | | | | GLGSAPSIHMEGPGESGVQLVCTARGWFPEPQVYWEDIRGEKLLAVSEHRIQDKDGLFYAEATLVVRNASAESVSCLVHNPVLTEEKGSVISLPEK |
Prediction | 855451403042475530202030543324030303157455145545544545631030302030445764301010314436464414040378 |
Values range from 0 (buried residue) to 8 (highly exposed residue) | |
Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Downloadalignment | 20 40 60 80 | | | | | |||||||||||||
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SS Seq | CCCCCCSSSSSCCCCCCSSSSSSSCCCCCCCSSSSSCCCCCSCCCCCCSSSCCCCCCSSSSSSSSSSCCCCCSSSSSSSSCCCCCCSSSSSSCCCC GLGSAPSIHMEGPGESGVQLVCTARGWFPEPQVYWEDIRGEKLLAVSEHRIQDKDGLFYAEATLVVRNASAESVSCLVHNPVLTEEKGSVISLPEK | |||||||||||||||||||
1 | 5zo1A | 0.15 | 0.15 | 4.91 | 1.33 | DEthreader | EVAENPVVEVREQAVGEVELSCLVPRSRPAAVLRWYR-DRKEL-KGVSSGQEN-GKVWSVASTVRFRVDDDGIVICEAQNQALSKQTQYVLDVQYH | |||||||||||||
2 | 6xlqA2 | 0.31 | 0.30 | 9.12 | 1.17 | SPARKS-K | ALGSDLHVDVKGYKDGGIHLECRSTGWYPQPQIQWSNNKGENIPTVEAPVVADGVGLYAVAASVIMRGS---GVSCTIRSSLLGLEKTASISIADP | |||||||||||||
3 | 4of8A2 | 0.21 | 0.20 | 6.30 | 0.50 | MapAlign | --PEAPKITQVIYADRKVEIECVSVGGKPAAEITWIDGLGNVLDNIEYTVIPLDQRRFTAKSVLRLTPHHNTNFSCQAQNTADRTYRSAKIRVE-- | |||||||||||||
4 | 4i0kA | 0.30 | 0.29 | 8.85 | 0.34 | CEthreader | APYSKPSMTLEPP-GNMVTITCSSYQGYPEAEVFWKDGQGVPLGNVTTSQMANERGLFDVHSVLRVVLGANGTYSCLVRNPVLQQDAHGSVTITG- | |||||||||||||
5 | 4f80A2 | 0.32 | 0.30 | 9.11 | 1.36 | MUSTER | ALGSDLHVDVKGYKDGGIHLECRSTGWYPQPQIQWSNNKGENIPTVEAPVVADGVGLYAVAASVIMRGG----VSCTIRSSLLGLEKTASISIADP | |||||||||||||
6 | 4f80A2 | 0.32 | 0.30 | 9.11 | 0.46 | HHsearch | ALGSDLHVDVKGYKDGGIHLECRSTGWYPQPQIQWSNNKGENIPTVEAPVVADGVGLYAVAASVIMRGG----VSCTIRSSLLGLEKTASISIADP | |||||||||||||
7 | 4f80A2 | 0.30 | 0.29 | 8.83 | 1.72 | FFAS-3D | ALGSDLHVDVKGYKDGGIHLECRSTGWYPQPQIQWSNNKGENIPTVEAPVVADGVGLYAVAASVIM----RGGVSCTIRSSLLGLEKTASISIADP | |||||||||||||
8 | 2w59A1 | 0.14 | 0.14 | 4.64 | 0.33 | EigenThreader | --PIQLYAIPPLYISLDAKLRCLVVNLPSDLSVTWTREKSGNLRPDPMVLQEHFNGTYSASSAVPVSTLSGERFTCTVQHEELPLPLSKSVYRNTG | |||||||||||||
9 | 4hh8A | 0.43 | 0.42 | 12.23 | 1.60 | CNFpred | ALGSDPHISMKVQESGEIQLECTSVGWYPEPQVQWQTHRGEEFPSMSESRNPDEEGLFTVRASVIIRDSSMKNVSCAIRNLLLGQEKEVEVSIP-- | |||||||||||||
10 | 2petA | 0.15 | 0.15 | 4.94 | 1.33 | DEthreader | RAKEATEVSPNGTLSEQEIATCNSRNGNPAPKITWYRNGQRLEVPMTSRTVREASGLLSLTSTLYLLRKDRASFHCAAHYSLGRLDSPTFHLTLHY | |||||||||||||
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Top 10 structural analogs in PDB (as identified by
TM-align)
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Top 5 enzyme homologs in PDB
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Template proteins with similar binding site:
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References: | |
1. | Wei Zheng, Chengxin Zhang, Yang Li, Robin Pearce, Eric W. Bell, Yang Zhang. Folding non-homology proteins by coupling deep-learning contact maps with I-TASSER assembly simulations. In preparation, 2020. |