>A0A0G2JN68 (375 residues) MSLMVVSMACVGFFLLQGAWTHEGGQDKPLLSAWPSTVVPRGGHVTLLCRSRLGFTIFSL YKEDGVPVPELYNKIFWKSILMGPVTPAHAGTYRCRGSHPRSPIEWSAPSNPLVIVVTGL FGKPSLSAQPGPTVRTGENVTLSCSSRSSFDMYHLSREGRAHEPRLPAVPSVNGTFQADF PLGPATHGGTYTCFGSLHDSPYEWSDPSDPLLVSVTGNSSSSSSSPTEPSSKTGIRRHLH ILIGTSVAIILFIILFFFLLHCCCSNKKNAAVMDQEPAGDRTVNREDSDDQDPQEVTYAQ LDHCVFTQTKITSPSQRPKTPPTDTTMYMELPNAKPRSLSPAHKHHSQALRGSSRETTAL SQNRVASSHVPAAGI |
Sequence |
20 40 60 80 100 120 140 160 180 200 220 240 260 280 300 320 340 360 | | | | | | | | | | | | | | | | | | MSLMVVSMACVGFFLLQGAWTHEGGQDKPLLSAWPSTVVPRGGHVTLLCRSRLGFTIFSLYKEDGVPVPELYNKIFWKSILMGPVTPAHAGTYRCRGSHPRSPIEWSAPSNPLVIVVTGLFGKPSLSAQPGPTVRTGENVTLSCSSRSSFDMYHLSREGRAHEPRLPAVPSVNGTFQADFPLGPATHGGTYTCFGSLHDSPYEWSDPSDPLLVSVTGNSSSSSSSPTEPSSKTGIRRHLHILIGTSVAIILFIILFFFLLHCCCSNKKNAAVMDQEPAGDRTVNREDSDDQDPQEVTYAQLDHCVFTQTKITSPSQRPKTPPTDTTMYMELPNAKPRSLSPAHKHHSQALRGSSRETTALSQNRVASSHVPAAGI |
Prediction | CCCHHHHHHHHHHHHCCCCSSSCCCCCCCSSSSSCCCCCCCCCCSSSSSSCCCCCCSSSSSSCCCSCCCSCCCCCCCCSSSSCCCCHHHCSSSSSSSSCCCCCCCCCCCCCCSSSSSSCCCCCCSSSSCCCCSSCCCCCSSSSSSCCCCCCSSSSSSCCCCCCCCCCCCCCCCCCSSSSSSCCCCCCCSSSSSSSSCCCCCCCSCCCCCCSSSSSSCCCCCCCCCCCCCCCCCCCCCSSSSSSSSHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCSSSSSSCCCCCCCCCCCCCCCCCCCCCCCSSSSSCCCCCCCCCCCCCCCCHHHHHCCCCCCSSSSSSSCCCCCCCCCCC |
Confidence | 961899999999752666323216799978997089832679738999984899848999986970353215876421588443132107589999984889853046788679999815777448856997202695189999748998379999789545654555446897269998625556783599998727998531388896899997378888788778998656773799999421689999999999999973013465445678988876666789866898644687523555667567898899999999737997378898767754222112330478776044321024678887889 |
H:Helix; S:Strand; C:Coil | |
Sequence |
20 40 60 80 100 120 140 160 180 200 220 240 260 280 300 320 340 360 | | | | | | | | | | | | | | | | | | MSLMVVSMACVGFFLLQGAWTHEGGQDKPLLSAWPSTVVPRGGHVTLLCRSRLGFTIFSLYKEDGVPVPELYNKIFWKSILMGPVTPAHAGTYRCRGSHPRSPIEWSAPSNPLVIVVTGLFGKPSLSAQPGPTVRTGENVTLSCSSRSSFDMYHLSREGRAHEPRLPAVPSVNGTFQADFPLGPATHGGTYTCFGSLHDSPYEWSDPSDPLLVSVTGNSSSSSSSPTEPSSKTGIRRHLHILIGTSVAIILFIILFFFLLHCCCSNKKNAAVMDQEPAGDRTVNREDSDDQDPQEVTYAQLDHCVFTQTKITSPSQRPKTPPTDTTMYMELPNAKPRSLSPAHKHHSQALRGSSRETTALSQNRVASSHVPAAGI |
Prediction | 731303111110000013020354414301000104332342533153120434122010114462434434543342302033034620120101011544333104312201000112223220112233304442300000205422000001132443334344343441412120312324231201011123432231043123020203244443321313232432331100000000000001110000001001323433434554156545354441567334300101012331456434334443652554311012044453564555443333235556443011012441435232436 |
Values range from 0 (buried residue) to 8 (highly exposed residue) | |
Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Downloadalignment | 20 40 60 80 100 120 140 160 180 200 220 240 260 280 300 320 340 360 | | | | | | | | | | | | | | | | | | | |||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
SS Seq | CCCHHHHHHHHHHHHCCCCSSSCCCCCCCSSSSSCCCCCCCCCCSSSSSSCCCCCCSSSSSSCCCSCCCSCCCCCCCCSSSSCCCCHHHCSSSSSSSSCCCCCCCCCCCCCCSSSSSSCCCCCCSSSSCCCCSSCCCCCSSSSSSCCCCCCSSSSSSCCCCCCCCCCCCCCCCCCSSSSSSCCCCCCCSSSSSSSSCCCCCCCSCCCCCCSSSSSSCCCCCCCCCCCCCCCCCCCCCSSSSSSSSHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCSSSSSSCCCCCCCCCCCCCCCCCCCCCCCSSSSSCCCCCCCCCCCCCCCCHHHHHCCCCCCSSSSSSSCCCCCCCCCCC MSLMVVSMACVGFFLLQGAWTHEGGQDKPLLSAWPSTVVPRGGHVTLLCRSRLGFTIFSLYKEDGVPVPELYNKIFWKSILMGPVTPAHAGTYRCRGSHPRSPIEWSAPSNPLVIVVTGLFGKPSLSAQPGPTVRTGENVTLSCSSRSSFDMYHLSREGRAHEPRLPAVPSVNGTFQADFPLGPATHGGTYTCFGSLHDSPYEWSDPSDPLLVSVTGNSSSSSSSPTEPSSKTGIRRHLHILIGTSVAIILFIILFFFLLHCCCSNKKNAAVMDQEPAGDRTVNREDSDDQDPQEVTYAQLDHCVFTQTKITSPSQRPKTPPTDTTMYMELPNAKPRSLSPAHKHHSQALRGSSRETTALSQNRVASSHVPAAGI | |||||||||||||||||||
1 | 7k80G | 0.57 | 0.33 | 9.43 | 1.37 | SPARKS-K | TTAHAGNYTCRGSHPNPVVIMVTGNHRKPSLLAHPGPLVKSGERVILQCWSDIMFEHFFLHKEGISKDPSRLVGVSKANFSIGPMMLALAGTYRCYGSVTHTPYQLSAPSDPLDIVVTGPYEKPSLSAQPGPKVQAGESVTLSCSSRSSYDMYHLSREGGAHERRLPAVRKVNRTFQADFPLGPATHGGTYRCFGSFRHSPYEWSDPSDPLLVSVT--------------------------------------------------------------------------------------------------------------------------------------------------------------- | |||||||||||||
2 | 3vh8G | 0.41 | 0.29 | 8.64 | 1.15 | MUSTER | ---------------------------KPFLSAWPSAVVPRGGHVTLRCHYRHRFNNFMLYKEDRIHIPIFHGRIFQESFNMSPVTTAHAGNYTCRGSHPHSPTGWSAPSNPVVIMVTGNHRKPSLLAHPGPLVKSGERVILQCWSDIMFEHFFLHKEGISKDPSRLVGQIHDGVSKANFSIGPMMLAGTYRCYGSVTHTPYQLSAPSDPLDIVVTGPYEKPSLS-AQPGPKVQAGESVTLSCSS-----------------------RSSYDMYHSREGGAHERRLPAVRKVNRTFQADFPLGGT--RHSPYEWSDPSDP-------LLV-------------------------------------------- | |||||||||||||
3 | 1efxD | 0.60 | 0.31 | 8.86 | 2.24 | FFAS-3D | ------------------------VHRKPSLLAHPGRLVKSEETVILQCWSDVRFEHFLLHREGKFKDGEHHDGVSKANFSIGPMMQDLAGTYRCYGSVTHSPYQLSAPSDPLDIVITGLYEKPSLSAQPGPTVLAGESVTLSCSSRSSYDMYHLSREGEAHECRFSAGPKVNGTFQADFPLGPATHGGTYRCFGSFRDSPYEWSNSSDPLLVSVI--------------------------------------------------------------------------------------------------------------------------------------------------------------- | |||||||||||||
4 | 6aedA | 0.29 | 0.23 | 7.16 | 1.36 | SPARKS-K | TWEHTGRYGCQYYSRAPLVLVMTGAYPKPTLSAQPSPVVTSGGRVTLQCESQVAFGGFILCKEQCLNSQPHARGSSRAIFSVGPVSPNRRWSHRCYGYDLNSPYVWSSPSDLLELLVPGVSKKPSLSVQPGPVMAPGESLTLQCVSDVGYDRFVLYKEGERDLRQLPGRQPQAGLSQANFTLGPVSYGGQYRCYGAHNLSSE-CSAPSDPLDILITGQIRGTPFISVQPGPASGENVTLLCQS------------------------------WRQFHAGAADAPLRLRSIHEYPKYQAEFPMSPVTS--------------AHAGTYRCYGSLN-----SDPYLLSHPSEPLELVVS----------------- | |||||||||||||
5 | 3wyrA | 0.81 | 0.41 | 11.59 | 2.33 | CNFpred | ---------------------------KPFCSAWPSAVVPQGGHVTLRCHYRRGFNIFTLYKKDGVPVPELYNRIFWNSFLISPVTPAHAGTYRCRGFHPHSPTEWSAPSNPLVIMVTGLYEKPSLTARPGPTVRTGENVTLSCSSQSSFDIYHLSREGEAHELRLPAVPSINGTFQADFPLGPATHGETYRCFGSFHGSPYEWSDASDPLPVSVT--------------------------------------------------------------------------------------------------------------------------------------------------------------- | |||||||||||||
6 | 1z7zI | 0.15 | 0.08 | 2.80 | 0.83 | DEthreader | SCDQPGNRKVYEL----SNVQLTVYWTPRVELAPLPSWQPVGKNLTLRCQVEGGRLTVVLLRGE-KEL--KREPAVAEVTTTVLVRRDHHANFSCRTELDLRPELFENTSAPYQLQTFVLPATPPQLV-SPRVLEVDTQGTVVCSLDLVSAQVHLALG-D-QRL-NPTVTYGNDSFSAKASVSVTAEGQRLTCAVIL--GNQ-S-QETLQTVTIYSFPAATLEVAGQL--------------------------------------------------------------------------------------------------------------------------------------------------- | |||||||||||||
7 | 4rrpA | 0.12 | 0.10 | 3.71 | 0.53 | MapAlign | ---------------------------DIQMTQSPSLSASVGDRVTITCRASQSVSAVAWYQQKPKLLFSGSRSGTDFTLTISSLQPEDFATYYCQQSQWY----PITFGQGTKVEIKGEEVQLVESG--GGLVQPGGSLRLSCAASGFYSSIHWVRQAEWVAYTISAD---TSKNTAYLQMNSLRDTAVYYCARSYSTKLAMDY-WGQGTLVTVSSASTKGPSVFPLAPSTSGGTAVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSCGSSIVSLLGIKVLNNPAKFTDPYEFEITFECLESLKHDLDSILVGPVPVGVNKFVFSADPPSAELIPASELVSVTVIVGYYVNNEYDQVDHIVRNILAEKPR | |||||||||||||
8 | 7k80G | 0.56 | 0.33 | 9.36 | 0.43 | CEthreader | RGSHPHSPTGWSAPSNPVVIMVTGNHRKPSLLAHPGPLVKSGERVILQCWSDIMFEHFFLHKEGISKDPSRLVGVSKANFSIGPMMLALAGTYRCYGSVTHTPYQLSAPSDPLDIVVTGPYEKPSLSAQPGPKVQAGESVTLSCSSRSSYDMYHLSREGGAHERRLPAVRKVNRTFQADFPLGPATHGGTYRCFGSFRHSPYEWSDPSDPLLVSVT--------------------------------------------------------------------------------------------------------------------------------------------------------------- | |||||||||||||
9 | 1b6uA | 0.61 | 0.32 | 9.09 | 1.07 | MUSTER | -------------------------HRKPSLLAHPGPLVKSEETVILQCWSDVRFQHFLLHREGKHLIGEHHDGVSKANFSIGPMMQDLAGTYRCYGSVTHSPYQLSAPSDPLDIVITGLYEKPSLSAQPGPTVLAGESVTLSCSSRSSYDMYHLSREGEAHERRFSAGPKVNGTFQADFPLGPATHGGTYRCFGSFRDSPYEWSNSSDPLLVSVTGNP------------------------------------------------------------------------------------------------------------------------------------------------------------ | |||||||||||||
10 | 3b43A | 0.13 | 0.12 | 4.23 | 0.52 | HHsearch | DHSDVGEYTCKAENSVGSAVLVIKRKLPPSFARKLKVHETLGFPVAFECRINGEPLQVSWYKDGELLKDDTSFIHNVATLQILQTDQSHVGQYNCSASNPLG-----TASSSAKLTLSEHEVPPFFDLKPVVDLALGESGTFKCHVTTAPIKITWAKDNREIRPGGNYK-MTLVENTATLTVLKVTDAGQYTCYASNVA-----GKDSCSAQLGVQEPPRFIKKLEPSRIVKQDEH----------TRYECKIGGSPEIKVLWYKDETEIQESSKEPPVFRKKPHPVETLKGAKSIHIVDSADIGEYQCKASND-------VGSDTCVGSITLKAPP-RFVKKLSDISTVVG-EEVQLQAGAEPISVAWFKDKGA | |||||||||||||
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Top 10 structural analogs in PDB (as identified by
TM-align)
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Top 5 enzyme homologs in PDB
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Template proteins with similar binding site:
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References: | |
1. | Wei Zheng, Chengxin Zhang, Yang Li, Robin Pearce, Eric W. Bell, Yang Zhang. Folding non-homology proteins by coupling deep-learning contact maps with I-TASSER assembly simulations. In preparation, 2020. |