>A0A0C4DH38 (117 residues) MGSTAILALLLAVLQGVCAEVQLVQSGAEVKKPGESLKISCKGSGYSFTSYWIGWVRQMP GKGLEWMGIIYPGDSDTRYSPSFQGQVTISADKSISTAYLQWSSLKASDTAMYYCAR |
Sequence |
20 40 60 80 100 | | | | | MGSTAILALLLAVLQGVCAEVQLVQSGAEVKKPGESLKISCKGSGYSFTSYWIGWVRQMPGKGLEWMGIIYPGDSDTRYSPSFQGQVTISADKSISTAYLQWSSLKASDTAMYYCAR |
Prediction | CCCSSHHHHHHHHHCCCCSSSSSSSCCCSSCCCCCCSSSSSSCCCCCCCCCSSSSSSSCCCCCCSSSSSSSCCCCCCCSCCCCCCCSSSSSCCCCCSSSSSSCCCCHHHCSSSSSCC |
Confidence | 994550678998731310024445224302389841899884579871234156776289997177589818999963253447818998407744134441379912357888619 |
H:Helix; S:Strand; C:Coil | |
Sequence |
20 40 60 80 100 | | | | | MGSTAILALLLAVLQGVCAEVQLVQSGAEVKKPGESLKISCKGSGYSFTSYWIGWVRQMPGKGLEWMGIIYPGDSDTRYSPSFQGQVTISADKSISTAYLQWSSLKASDTAMYYCAR |
Prediction | 872101000201023303110223234444443442031114123331332303002224443120001020464625224404230303334343103211341436020213138 |
Values range from 0 (buried residue) to 8 (highly exposed residue) | |
Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Downloadalignment | 20 40 60 80 100 | | | | | | |||||||||||||
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SS Seq | CCCSSHHHHHHHHHCCCCSSSSSSSCCCSSCCCCCCSSSSSSCCCCCCCCCSSSSSSSCCCCCCSSSSSSSCCCCCCCSCCCCCCCSSSSSCCCCCSSSSSSCCCCHHHCSSSSSCC MGSTAILALLLAVLQGVCAEVQLVQSGAEVKKPGESLKISCKGSGYSFTSYWIGWVRQMPGKGLEWMGIIYPGDSDTRYSPSFQGQVTISADKSISTAYLQWSSLKASDTAMYYCAR | |||||||||||||||||||
1 | 6wznA | 0.47 | 0.46 | 13.45 | 1.33 | DEthreader | SF-IWYQQPKLLIYQSSGTQVQLVESGGGLVQPGGSLRLSCAASGLTFSNYAMNWVRQAPGKGLEWVSSISSRGDTTYYADSVKGRFTISRDNSKSTLYLQMNSLRAEDAAVYYCAR | |||||||||||||
2 | 7k78K1 | 0.56 | 0.47 | 13.53 | 1.12 | SPARKS-K | -------------------EVQLQQSGPELVEPGTSVKMPCKASGYTFTSYTIQWVKQTPRQGLEWIGYIYPYNAGTKYNEKFKGKATLTSDKSSSTVYMELSSLTSEDSAVYYCAR | |||||||||||||
3 | 4rrpA | 0.49 | 0.48 | 13.91 | 0.47 | MapAlign | --DSQLKSSPVTKSFNRGEEVQLVESGGGLVQPGGSLRLSCAASGFNVSYSSIHWVRQAPGKGLEWVAYIYPSSGYTSYADSVKGRFTISADTSKNTAYLQMNSLRAEDTAVYYCAR | |||||||||||||
4 | 4rrpA3 | 0.57 | 0.48 | 13.76 | 0.25 | CEthreader | -------------------EVQLVESGGGLVQPGGSLRLSCAASGFNVSYSSIHWVRQAPGKGLEWVAYIYPSSGYTSYADSVKGRFTISADTSKNTAYLQMNSLRAEDTAVYYCAR | |||||||||||||
5 | 4f9pD1 | 0.57 | 0.48 | 13.76 | 1.16 | MUSTER | -------------------QVQLQQSGAEVVRPGTSVKVSCKASGYAFTSYLIHWIKQRPGQGLEWIGVINPRSGDSHYNEKFKDRTTLTADQSSSTAYMQLSSLTSDDSAVYFCAR | |||||||||||||
6 | 2kh2B2 | 0.48 | 0.44 | 12.68 | 0.41 | HHsearch | ----------GGGSGGGGSEVQLVESGGGLVQPGGSLRLSCAASGFDFSRYDMSWVRQAPGKRLEWVAYISSGGGSTYFPDTVKGRFTISRDNAKNTLYLQMNSLRAEDTAVYYCAR | |||||||||||||
7 | 4imlH1 | 0.64 | 0.54 | 15.38 | 2.00 | FFAS-3D | -------------------QVQLVQSGAEVKKPGASVKVSCKASGYTFTGYYMHWVRQAPGQGLEWMGWINPNSGGTNYAQKFQGRVTMTRDTSISTAYMELSRLRSDDTAVYYCAR | |||||||||||||
8 | 1moeA | 0.46 | 0.45 | 13.21 | 0.43 | EigenThreader | GGTKLEIKGGGSG---GGGEVQLQQSGAELVEPGASVKLSCTASGFNIKDTYMHWVKQRPEQGLEWIGRIDPANGNSKYVPKFQGKATITADTSSNTAYLQLTSLTSEDTAVYYCAP | |||||||||||||
9 | 5c2bH | 0.65 | 0.55 | 15.61 | 1.69 | CNFpred | -------------------QVQLVQSGAEVKKPGSSVKVSCKASGGTFSSYAISWVRQAPGQGLEWMGGIIPIFGTANYAQKFQGRVTITADESTSTAYMELSSLRSEDTAVYYCAR | |||||||||||||
10 | 3wbdA | 0.50 | 0.50 | 14.38 | 1.33 | DEthreader | QLSIWYLQPKPLYRFSGGSQIQLQQSGPELVRPGASVKISCKASGYTFTDYYIHWVKQRPGEGLEWIGWIYPGSGNTKYNEKFKGKATLTVDTSSSTAYMQLSSLTSEDSAVYFCAR | |||||||||||||
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Top 10 structural analogs in PDB (as identified by
TM-align)
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Top 5 enzyme homologs in PDB
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Template proteins with similar binding site:
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References: | |
1. | Wei Zheng, Chengxin Zhang, Yang Li, Robin Pearce, Eric W. Bell, Yang Zhang. Folding non-homology proteins by coupling deep-learning contact maps with I-TASSER assembly simulations. In preparation, 2020. |