>A0A0B4J274 (112 residues) MEKMLECAFIVLWLQLGWLSGEDQVTQSPEALRLQEGESSSLNCSYTVSGLRGLFWYRQD PGKGPEFLFTLYSAGEEKEKERLKATLTKKESFLHITAPKPEDSATYLCAVQ |
Sequence |
20 40 60 80 100 | | | | | MEKMLECAFIVLWLQLGWLSGEDQVTQSPEALRLQEGESSSLNCSYTVSGLRGLFWYRQDPGKGPEFLFTLYSAGEEKEKERLKATLTKKESFLHITAPKPEDSATYLCAVQ |
Prediction | CCCHHHHHHHHHHHHHCCCCCCSSSSSCCCSSSSCCCCCSSSSSSSCCCCCCCSSSSSCCCCCCCSSSSSSSCCCCCCCCCCSSSSSSCCSSSSSSCCCCHHHCSSSSSSSC |
Confidence | 9742678998888752785423789855660553899219999995477655555564089999657777513667899875699820983899866899123489963219 |
H:Helix; S:Strand; C:Coil | |
Sequence |
20 40 60 80 100 | | | | | MEKMLECAFIVLWLQLGWLSGEDQVTQSPEALRLQEGESSSLNCSYTVSGLRGLFWYRQDPGKGPEFLFTLYSAGEEKEKERLKATLTKKESFLHITAPKPEDSATYLCAVQ |
Prediction | 7643231210120100121437331413354141444340304041323134303503243452130002211446554633040434544120304434350302131048 |
Values range from 0 (buried residue) to 8 (highly exposed residue) | |
Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Downloadalignment | 20 40 60 80 100 | | | | | | |||||||||||||
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SS Seq | CCCHHHHHHHHHHHHHCCCCCCSSSSSCCCSSSSCCCCCSSSSSSSCCCCCCCSSSSSCCCCCCCSSSSSSSCCCCCCCCCCSSSSSSCCSSSSSSCCCCHHHCSSSSSSSC MEKMLECAFIVLWLQLGWLSGEDQVTQSPEALRLQEGESSSLNCSYTVSGLRGLFWYRQDPGKGPEFLFTLYSAGEEKEKERLKATLTKKESFLHITAPKPEDSATYLCAVQ | |||||||||||||||||||
1 | 6wznA | 0.23 | 0.22 | 7.00 | 1.33 | DEthreader | P-FLSVI-YQQKPKAPKLSGTQVQLVESG-GGLVQPGGSLRLSCAASLTSNYAMNWVRQAPGKGLEWVSSISSGDTTYYKGRFTISRDNSTLYLQMNSLRAEDAAVYYCARL | |||||||||||||
2 | 5yfiL1 | 0.25 | 0.21 | 6.36 | 1.06 | SPARKS-K | ---------------------DIKMTQSPSSMYVSLGERVTITCKASQDINRYLSWFQQKPGKSPKTLIYRANRMLDGVPSRFSGSGSGQDYSLTISSLEYEDMGNYYCLQY | |||||||||||||
3 | 4gftB | 0.28 | 0.22 | 6.82 | 0.50 | MapAlign | ----------------------VQLQESGG-GTVQPGGSLKLSCSAAPFSNYAMGWFRQAPGQEREFVAGITGSGSQYYAGRFTISRDNNAVYLQMNSVKAEDTAVYYCAAR | |||||||||||||
4 | 3nn8A | 0.30 | 0.24 | 7.31 | 0.33 | CEthreader | ---------------------QVQLQQSGP-EDVKPGASVKISCKASGYSLMGVNWVKQSPGKGLEWLAHIYWDDDKRYNSRATLTVDKSTVYLELRSLTSEDSSVYYCARR | |||||||||||||
5 | 5gruL2 | 0.30 | 0.26 | 7.87 | 1.13 | MUSTER | --------------SSGGGGSDIQMTQSPSSLSASVGDRVTITCRASQSVSSAVAWYQQKPGKAPKLLIYSASSLYSGVPSRFSGSRSGTDFTLTISSLQPEDFATYYCQQS | |||||||||||||
6 | 6jxrm | 0.46 | 0.36 | 10.42 | 0.39 | HHsearch | ------------------------VEQDPGPLSVPEGAIVSLNCTYSNSAFQYFMWYRQYSRKGPELLMYTYSS-GNKEDGRFTAQVDKKYISLFIRDSQPSDSATYLCAMS | |||||||||||||
7 | 7deoA2 | 0.30 | 0.26 | 7.85 | 1.67 | FFAS-3D | ----------------GGGGSDIVMTQSPLSLPVTPGEPASISCRSSQSGYNYLDWYLQKPGQSPQLLIYLGSNRASGVPDRFSGSGSGTDFTLKISRVEAEDVGVYYCMQG | |||||||||||||
8 | 1bwmA2 | 0.39 | 0.37 | 10.82 | 0.40 | EigenThreader | SDYKDDDDKR-------SGGAQQQVRQSPQSLTVWEGETTILNCSYEDSTFDYFPWYRQFPGKSPALLIAISLVSNKKEDGRFTIFFNKKKLSLHITDSQPGDSATYFCAAT | |||||||||||||
9 | 4prhD | 1.00 | 0.81 | 22.75 | 1.56 | CNFpred | ---------------------EDQVTQSPEALRLQEGESSSLNCSYTVSGLRGLFWYRQDPGKGPEFLFTLYSAGEEKEKERLKATLTKKESFLHITAPKPEDSATYLCAVQ | |||||||||||||
10 | 3wbdA | 0.24 | 0.23 | 7.23 | 1.33 | DEthreader | -TPLSLP-AI-YLQKSPKPGGQIQLQQSG-PELVRPGASVKISCKASYTFDYYIHWVKQRPGEGLEWIGWIYPSGNTKYKGKATLTVDTSTAYMQLSSLTSEDSAVYFCARG | |||||||||||||
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Top 10 structural analogs in PDB (as identified by
TM-align)
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Top 5 enzyme homologs in PDB
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Template proteins with similar binding site:
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References: | |
1. | Wei Zheng, Chengxin Zhang, Yang Li, Robin Pearce, Eric W. Bell, Yang Zhang. Folding non-homology proteins by coupling deep-learning contact maps with I-TASSER assembly simulations. In preparation, 2020. |