>A0A0B4J244 (114 residues) MASAPISMLAMLFTLSGLRAQSVAQPEDQVNVAEGNPLTVKCTYSVSGNPYLFWYVQYPN RGLQFLLKYITGDNLVKGSYGFEAEFNKSQTSFHLKKPSALVSDSALYFCAVRD |
Sequence |
20 40 60 80 100 | | | | | MASAPISMLAMLFTLSGLRAQSVAQPEDQVNVAEGNPLTVKCTYSVSGNPYLFWYVQYPNRGLQFLLKYITGDNLVKGSYGFEAEFNKSQTSFHLKKPSALVSDSALYFCAVRD |
Prediction | CCCHHHHHHHHHHHHCCCCCCSSSSCCCSSSSCCCCCSSSSSSSSCCCCCSSSSSSSCCCCCCSSSSSSSCCCCCCCCCCCSSSSSSCCCCSSSSSSCCCCCCCCSSSSSSSSC |
Confidence | 997579652222433152266687288828975992299998984168776999997899995899999448972234887799998458789999347882243566655539 |
H:Helix; S:Strand; C:Coil | |
Sequence |
20 40 60 80 100 | | | | | MASAPISMLAMLFTLSGLRAQSVAQPEDQVNVAEGNPLTVKCTYSVSGNPYLFWYVQYPNRGLQFLLKYITGDNLVKGSYGFEAEFNKSQTSFHLKKPSALVSDSALYFCAVRD |
Prediction | 743332321232102222312404346641424454514042416444333023023445530210031234565557654040414467442404045343431020020248 |
Values range from 0 (buried residue) to 8 (highly exposed residue) | |
Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Downloadalignment | 20 40 60 80 100 | | | | | | |||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
SS Seq | CCCHHHHHHHHHHHHCCCCCCSSSSCCCSSSSCCCCCSSSSSSSSCCCCCSSSSSSSCCCCCCSSSSSSSCCCCCCCCCCCSSSSSSCCCCSSSSSSCCCCCCCCSSSSSSSSC MASAPISMLAMLFTLSGLRAQSVAQPEDQVNVAEGNPLTVKCTYSVSGNPYLFWYVQYPNRGLQFLLKYITGDNLVKGSYGFEAEFNKSQTSFHLKKPSALVSDSALYFCAVRD | |||||||||||||||||||
1 | 2gjjA | 0.14 | 0.14 | 4.78 | 1.33 | DEthreader | IVLTCKSLAWYQKLLIKSGEVQLQQS-GPEVVKTGASVKISCKASYSFGYFINWVKKNSGKSPEWIGHISSYATSTYFKNKAAFTVDTSSSTAFMQLNSLTSEDSADYYCVRSG | |||||||||||||
2 | 3tf7C1 | 0.61 | 0.50 | 14.32 | 1.09 | SPARKS-K | --------------------QSVTQPDARVTVSEGASLQLRCKYSYSATPYLFWYVQYPRQGPQMLLKYYSGDPVVQGVNGFEAEFSKSDSSFHLRKASVHRSDSAVYFCAVSA | |||||||||||||
3 | 4lfhD1 | 0.31 | 0.25 | 7.68 | 1.75 | FFAS-3D | --------------------QKVTQAQSSVSMPVRKAVTLNCLYETSWSYYIFWYKQLPSKEMIFLIRQGSDEQN-AKSGRYSVNFKKAAKSVALTISALQLEDSAKYFCALGD | |||||||||||||
4 | 3revA | 1.00 | 0.82 | 23.09 | 1.67 | CNFpred | --------------------QSVAQPEDQVNVAEGNPLTVKCTYSVSGNPYLFWYVQYPNRGLQFLLKYITGDNLVKGSYGFEAEFNKSQTSFHLKKPSALVSDSALYFCAVRD | |||||||||||||
5 | 3wbdA | 0.21 | 0.21 | 6.68 | 1.33 | DEthreader | VMTQCRSLYWYLKPLFVGGSIQLQQS-GPELVRPGASVKISCKASYTTDYYIHWVKQRPGEGLEWIGWIYPSGNTKYNEFKATLTVDTSSSTAYMQLSSLTSEDSAVYFCARGG | |||||||||||||
6 | 3bikC | 0.20 | 0.17 | 5.35 | 1.09 | SPARKS-K | -----------------GPWRSLTFYPAWLTVSEGANATFTCSLSNSEDLMLNWNRLSPSNQTEKQAAFSNGLSQPVQDARFQIIQLPNRHDFHMNILDTRRNDSGIYLCGAIS | |||||||||||||
7 | 4gftB | 0.19 | 0.16 | 5.08 | 0.53 | MapAlign | --------------------VQLQESG-GGTVQPGGSLKLSCSAAPFSNYAMGWFRQAPGQEREFVAGITGSGSQYYAKGRFTISRDNAMNAVYLQMNSVKAEDTAVYYCAARP | |||||||||||||
8 | 6xxoA | 0.17 | 0.14 | 4.61 | 0.31 | CEthreader | -------------------QVQLQESGG-GSVQAGGSLRLSCARSGWPTYSMNWFRQAPGKEREAVAGISSTMSGIIFAGQFTISQDNAKNTVYLQMNNLKPEDTAIYYCAARR | |||||||||||||
9 | 1fytD | 0.63 | 0.52 | 14.80 | 0.95 | MUSTER | --------------------QSVTQLGSHVSVSEGALVLLRCNYSSSVPPYLFWYVQYPNQGLQLLLKYTSAATLVKGINGFEAEFKKSETSFHLTKPSAHMSDAAEYFCAVSE | |||||||||||||
10 | 6jxrm | 0.33 | 0.26 | 7.89 | 0.39 | HHsearch | ----------------------VEQDPGPLSVPEGAIVSLNCTYSNSAFQYFMWYRQYSRKGPELLMYTYSS--GNKEDGRFTAQVDKSSKYISLFIRDSQPSDSATYLCAMSK | |||||||||||||
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Top 10 structural analogs in PDB (as identified by
TM-align)
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Top 5 enzyme homologs in PDB
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Template proteins with similar binding site:
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References: | |
1. | Wei Zheng, Chengxin Zhang, Yang Li, Robin Pearce, Eric W. Bell, Yang Zhang. Folding non-homology proteins by coupling deep-learning contact maps with I-TASSER assembly simulations. In preparation, 2020. |