>A0A0B4J240 (114 residues) MKKHLTTFLVILWLYFYRGNGKNQVEQSPQSLIILEGKNCTLQCNYTVSPFSNLRWYKQD TGRGPVSLTIMTFSENTKSNGRYTATLDADTKQSSLHITASQLSDSASYICVVS |
Sequence |
20 40 60 80 100 | | | | | MKKHLTTFLVILWLYFYRGNGKNQVEQSPQSLIILEGKNCTLQCNYTVSPFSNLRWYKQDTGRGPVSLTIMTFSENTKSNGRYTATLDADTKQSSLHITASQLSDSASYICVVS |
Prediction | CCCCHHHHHHHHHHHHHCCCCCCSSSSCCCCSSSCCCCCSSSSSSSSCCCCCCSSSSSSCCCCCCSSSSSSSSCCCCCCCCCSSSSSSCCCCSSSSSSCCCCHHHCSSSSSSSC |
Confidence | 996267999744353315347607995876278719922999999821564736889988999958999998158976467489999578858988972678135467762229 |
H:Helix; S:Strand; C:Coil | |
Sequence |
20 40 60 80 100 | | | | | MKKHLTTFLVILWLYFYRGNGKNQVEQSPQSLIILEGKNCTLQCNYTVSPFSNLRWYKQDTGRGPVSLTIMTFSENTKSNGRYTATLDADTKQSSLHITASQLSDSASYICVVS |
Prediction | 864433333123221013144634151456414343444130403143343320100114467303100211156765464304141457744140404534443313113037 |
Values range from 0 (buried residue) to 8 (highly exposed residue) | |
Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Downloadalignment | 20 40 60 80 100 | | | | | | |||||||||||||
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SS Seq | CCCCHHHHHHHHHHHHHCCCCCCSSSSCCCCSSSCCCCCSSSSSSSSCCCCCCSSSSSSCCCCCCSSSSSSSSCCCCCCCCCSSSSSSCCCCSSSSSSCCCCHHHCSSSSSSSC MKKHLTTFLVILWLYFYRGNGKNQVEQSPQSLIILEGKNCTLQCNYTVSPFSNLRWYKQDTGRGPVSLTIMTFSENTKSNGRYTATLDADTKQSSLHITASQLSDSASYICVVS | |||||||||||||||||||
1 | 3wbdA | 0.23 | 0.21 | 6.59 | 1.33 | DEthreader | --------KPG--QSPKPGGSQIQLQQSG-PELVRPGASVKISCKASYTTDYYIHWVKQRPGEGLEWIGWIYPSGNTKYKGKATLTVDTSSSTAYMQLSSLTSEDSAVYFCARG | |||||||||||||
2 | 2p1yA2 | 0.36 | 0.33 | 9.92 | 1.08 | SPARKS-K | ---------SADDAKKDAAKKDGQVRQSPQSLTVWEGETAILNCSYENSAFDYFPWYQQFPGEGPALLISILSVSDKKEDGRFTIFFNKREKKLSLHIADSQPGDSATYFCAAI | |||||||||||||
3 | 2p1yA2 | 0.38 | 0.33 | 9.88 | 1.73 | FFAS-3D | -------------AKKDAAKKDGQVRQSPQSLTVWEGETAILNCSYENSAFDYFPWYQQFPGEGPALLISILSVSDKKEDGRFTIFFNKREKKLSLHIADSQPGDSATYFCAA- | |||||||||||||
4 | 3tyfA | 1.00 | 0.81 | 22.60 | 1.62 | CNFpred | ----------------------NQVEQSPQSLIILEGKNCTLQCNYTVSPFSNLRWYKQDTGRGPVSLTIMTFSENTKSNGRYTATLDADTKQSSLHITASQLSDSASYICVVS | |||||||||||||
5 | 6wznA | 0.18 | 0.17 | 5.41 | 1.33 | DEthreader | --------KPGKAPGS-SSGTQVQLVESG-GGLVQPGGSLRLSCAASLTSNYAMNWVRQAPGKGLEWVSSISRGDTTYYKGRFTISRDNSKSTLYLQMNSLRAEDAAVYYCARL | |||||||||||||
6 | 3mffA1 | 0.43 | 0.34 | 10.04 | 1.06 | SPARKS-K | -----------------------QVRQSPQSLTVWEGETTILNCSYENSAFDYFPWYQQFPGEGPALLIAIRSVSDKKEDGRFTIFFNKREKKLSLHITDSQPGDSATYFCAAT | |||||||||||||
7 | 6vy5H | 0.24 | 0.19 | 6.02 | 0.45 | MapAlign | ---------------------EVQLLESGG-GLIQPGGSLRLSCAASGFSRFTMSWVRQPPGKGPEWVSGISGSGHTYYAGRFTISRDNSKNTLYLQMNSLKAEDTAVYYCAKD | |||||||||||||
8 | 4gftB | 0.20 | 0.16 | 5.06 | 0.30 | CEthreader | ----------------------VQLQESGG-GTVQPGGSLKLSCSAAPFSNYAMGWFRQAPGQEREFVAGITGSGRSQYYARFTISRDNAMNAVYLQMNSVKAEDTAVYYCAAR | |||||||||||||
9 | 3mffA | 0.43 | 0.34 | 10.04 | 0.96 | MUSTER | -----------------------QVRQSPQSLTVWEGETTILNCSYENSAFDYFPWYQQFPGEGPALLIAIRSVSDKKEDGRFTIFFNKREKKLSLHITDSQPGDSATYFCAAT | |||||||||||||
10 | 6jxrm | 0.43 | 0.33 | 9.78 | 0.40 | HHsearch | ------------------------VEQDPGPLSVPEGAIVSLNCTYSNSAFQYFMWYRQYSRKGPELLMYTYSS-GNKEDGRFTAQVDKSSKYISLFIRDSQPSDSATYLCAMS | |||||||||||||
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Top 10 structural analogs in PDB (as identified by
TM-align)
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Top 5 enzyme homologs in PDB
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Template proteins with similar binding site:
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References: | |
1. | Wei Zheng, Chengxin Zhang, Yang Li, Robin Pearce, Eric W. Bell, Yang Zhang. Folding non-homology proteins by coupling deep-learning contact maps with I-TASSER assembly simulations. In preparation, 2020. |