Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Downloadalignment | | 20 40 60 80 100 120 140 160 180 200 220 240 260 280 300 320 340
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| SS Seq | CCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCSSCCHHHCCCCCHHHHHHHHHHHHCCSSSSSSCCCCSSSSCCHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCHHHCCCCCHHHHHHHHHHHCCCCCCCCCCSSCCCCSSSCCSSCCCCCSSSSHHHHHHCCCCCCCCCCCCCCCCCSCCCCCSCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCSSSCCCCCCCCCCCCCCCSSCCCCCSSSSSSSC MGLEALVPLAMIVAIFLLLVDLMHRHQRWAARYPPGPLPLPGLGNLLHVDFQNTPYCFDQLRRRFGDVFSLQLAWTPVVVLNGLAAVREAMVTRGEDTADRPPAPIYQVLGFGPRSQGVILSRSFNDENLRIVVGNLFLAGMVTTSTTLAWGLLLMILHLDVQRGRRVSPGCPIVGTHVCPVRVQQEIDDVIGQVRRPEMGDQAHMPCTTAVIHEVQHFGDIVPLGVTHMTSRDIEVQGFRIPKGTTLITNLSSVLKDEAVWKKPFRFHPEHFLDAQGHFVKPEAFLPFSAGRRACLGEPLARMELFLFFTSLLQHFSFSVAAGQPRPSHSRVVSFLVTPSPYELCAVPR |
1 | 2hi4A | 0.32 | 0.27 | 8.27 | 1.33 | DEthreader | | -----------------------R--VP--LKSPPEPWGWPLLGHVLTLGK-NPHLALSRMSQRYGDVLQIRIGSTPVLVLSRLDTIRQALVRQGDDFKGRPDSTITDGQSLSTDSGPVWRPRLIPQEKIVNLVNDIFGAGFDTVTTAISWSLMYLVTKPEIQR----------------K--IQKELDTVIGRERRPRLSDRPQLPYLEAFILETFRHSSFLPFTIPHSTTRDTTLNGFYIPKKCCVFVNQWQVNHDPELWEDPSEFRPERFLTADAINKPSEKMMLFGMGKRRCIGEVLAKWEIFLFLAILLQQLEFSVPPGVKVDLTP-IYGLTMKHARCHVQARRF |
2 | 3c6gB2 | 0.46 | 0.34 | 10.00 | 2.21 | SPARKS-K | | --------------------------------FPPGPPGLPFIGNIYSLSSELPHVYMRKQSQVYGEIFSLDLGGISTVVLNGYDVVKECLVHQSEIFADRPE----------------------------------------TTTNVLRWAILFMALYP------------------NIQGQVQKEIDLIMGPNGKPSWDDKCKMPYTEAVLHEVLRFCNIVPLGIFHATSEDAVVRGYSIPKGTTVITNLYSVHFDEKYWRDPEVFHPERFLDSSGYFAKKEALVPFSLGRRHCLGEHLARMEMFLFFTALLQRFHLHFP-HELVPDLKPRLGMTLQPQPYLICAERR |
3 | 3c6gB | 0.44 | 0.38 | 11.04 | 0.74 | MapAlign | | --------------------------------FPPGPPGLPFIGNIYSLSSELPHVYMRKQSQVYGEIFSLDLGGISTVVLNGYDVVKECLVHQSEIFADRPCLPLFMKMTKMGGLLNSRYGRGFSKENLIFSVGELIIAGTETTTNVLRWAILFMALYPNIQ------------------GQVQKEIDLIMGPNGKPSWDDKCKMPYTEAVLHEVLRFCNIVPLGIFHATSEDAVVRGYSIPKGTTVITNLYSVHFDEKYWRDPEVFHPERFLDSSGYFAKKEALVPFSLGRRHCLGEHLARMEMFLFFTALLQRFHLHFP-HELVPDLKPRLGMTLQPQPYLICAERR |
4 | 3c6gB2 | 0.47 | 0.35 | 10.07 | 0.44 | CEthreader | | --------------------------------FPPGPPGLPFIGNIYSLSSELPHVYMRKQSQVYGEIFSLDLGGISTVVLNGYDVVKECLVHQSEIFADRP----------------------------------------ETTTNVLRWAILFMALYPNIQ------------------GQVQKEIDLIMGPNGKPSWDDKCKMPYTEAVLHEVLRFCNIVPLGIFHATSEDAVVRGYSIPKGTTVITNLYSVHFDEKYWRDPEVFHPERFLDSSGYFAKKEALVPFSLGRRHCLGEHLARMEMFLFFTALLQRFHLHFPHELV-PDLKPRLGMTLQPQPYLICAERR |
5 | 3c6gB2 | 0.45 | 0.33 | 9.69 | 1.75 | MUSTER | | --------------------------------FPPGPPGLPFIGNIYSLSSELPHVYMRKQSQVYGEIFSLDLGGISTVVLNGYDVVKECLVHQ----------------------------------------SEIFADRPETTTNVLRWAILFMALY------------------PNIQGQVQKEIDLIMGPNGKPSWDDKCKMPYTEAVLHEVLRFCNIVPLGIFHATSEDAVVRGYSIPKGTTVITNLYSVHFDEKYWRDPEVFHPERFLDSSGYFAKKEALVPFSLGRRHCLGEHLARMEMFLFFTALLQRFHLHFPHEL-VPDLKPRLGMTLQPQPYLICAERR |
6 | 2f9qA | 0.90 | 0.74 | 20.88 | 1.27 | HHsearch | | ---------------------------------PPGPLPLP----------QNTPYCFDQLRRRFGDVFSLQLAWTPVVVLNGLAAVREALVTHGEDTADRPPVPITQILGFGQGRYGRRIESSFNDENLRIVVADLFSAGMVTTSTTLAWGLLLMILHPDVQR------------------RVQQEIDDVIGQVRRPEMGDQAHMPYTTAVIHEVQRFGDIVPLGMTHMTSRDIEVQGFRIPKGTTLITNLSSVLKDEAVWEKPFRFHPEHFLDAQGHFVKPEAFLPFSAGRRACLGEPLARMELFLFFTSLLQHFSFSVPTGQPRPSHHGVFAFLVSPSPYELCAVPR |
7 | 3e6iA | 0.32 | 0.29 | 8.70 | 3.50 | FFAS-3D | | -------------------------------KLPPGPFPLPIIGNLFQLELKNIPKSFTRLAQRFGPVFTLYVGSQRMVVMHGYKAVKEALLDYKDEFSGRGDLPAFHAHRDRGIIFNNGPTWKDIRRFSLTGNESRIQREAHFMDGITVTVADLFFAGTETTSTTLRYGLLILMKYPEIEEKLHEEIDRVIGPSRIPAIKDRQEMPYMDAVVHEIQRFITLVPSNLPHEATRDTIFRGYLIPKGTVVVPTLDSVLYDNQEFPDPEKFKPEHFLNENGKFKYSDYFKPFSTGKRVCAGEGLARMELFLLLCAILQHFNLKPLVDPKDIDLSPIHGFGCIPPRYKLCVIPR |
8 | 2vn0A | 0.43 | 0.37 | 10.73 | 1.15 | EigenThreader | | -------------------------------KLPPGPTPLPIIGNMLQIDVKDICKSFTNFSKVYGPVFTVYFGMNPIVVFHGYEAVKEALIDNGEEFSGRGNSPISQRITKGLGIISDNQKSEFNIENLVGTVADLFVAGTETTSTTLRYGLLLLLKH------------------PEVTAKVQEEIDHVIGRHRSPCMQDRSHMPYTDAVVHEIQRYSDLVPTGVPHAVTTDTKFRNYLIPKGTTIMALLTSVLHDDKEFPNPNIFDPGHFLDKNGNFKKSDYFMPFSAGKRICAGEGLARMELFLFLTTILQNFNLKSVDDLKNLNTTAVTKGVSLPPSYQICFIPV |
9 | 3qm4A | 0.65 | 0.60 | 17.12 | 2.47 | CNFpred | | FRPNGLLDKAVSNVIASLTCGRRFEYD--------DPRFLRLLDLAQEGLKEESGFLREVLNA--VPVLLHIPALAGKVLKAFLTQLDELLTEHRMTWDAQPPRDLTEAFLAEMEKAKGNPESSFNDENLRIVVADLFSAGMVTTSTTLAWGLLLMILHPDVQR------------------RVQQEIDDVIGQVRRPEMGDQAHMPYTTAVIHEVQRFGDIVPLGVTHMTSRDIEVQGFRIPKGTTLITNLSSVLKDEAVWEKPFRFHPEHFLDAQGHFVKPEAFLPFSAGRRACLGEPLARMELFLFFTSLLQHFSFSVPTGQPRPSHHGVFAFLVSPSPYELCAVPR |
10 | 3c6gB | 0.44 | 0.37 | 10.96 | 1.33 | DEthreader | | --------------------------------FPPGPPGLPFIGNIYSLAASLPHVYMRKQSQVYGEIFSLDLGGISTVVLNGYDVVKECLVHQSEIFADRPCFMMTKMGGLNSRYGRGWVDGSFSKENLIFSVGELIIAGTETTTNVLRWAILFMALYPNIQ------------------GQVQKEIDLIMGPNGKPSWDDKCKMPYTEAVLHEVLRFCNIVPLGIFHATSEDAVVRGYSIPKGTTVITNLYSVHFDEKYWRDPEVFHPERFLDSSYFAKK-EALVPFSLGRRHCLGEHLARMEMFLFFTALLQRFHLHFPHEL-VPDLKPRLGMTLQPQPYLICAERR |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Download alignment lists the threading program used to identify the template, and provide the 3D structure of aligned regions of threading templates (threading[1-10].pdb.gz). |
(f) | Template residues identical to query sequence are highlighted in color. |
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