>A0A075B6P5 (120 residues) MRLPAQLLGLLMLWVSGSSGDIVMTQSPLSLPVTPGEPASISCRSSQSLLHSNGYNYLDW YLQKPGQSPQLLIYLGSNRASGVPDRFSGSGSGTDFTLKISRVEAEDVGVYYCMQALQTP |
Sequence |
20 40 60 80 100 120 | | | | | | MRLPAQLLGLLMLWVSGSSGDIVMTQSPLSLPVTPGEPASISCRSSQSLLHSNGYNYLDWYLQKPGQSPQLLIYLGSNRASGVPDRFSGSGSGTDFTLKISRVEAEDVGVYYCMQALQTP |
Prediction | CCCHHHHHHHHHHHCCCCCCCSSSSCCCCCSSSCCCCCSSSSSSCCCCCCCCCCCCSSSSSSCCCCCCCCSSSSCCCCCCCCCCCCCCCCCCCCCSSSSSCCCCHHHCSSSSSCCCCCCC |
Confidence | 985279999999854898521888455873110899329998874666235789841654313899997221110222578999880646768864555478894672334331678899 |
H:Helix; S:Strand; C:Coil | |
Sequence |
20 40 60 80 100 120 | | | | | | MRLPAQLLGLLMLWVSGSSGDIVMTQSPLSLPVTPGEPASISCRSSQSLLHSNGYNYLDWYLQKPGQSPQLLIYLGSNRASGVPDRFSGSGSGTDFTLKISRVEAEDVGVYYCMQALQTP |
Prediction | 863313231312102341413020003354240346340404030123034455431000112346532320024014344322332323334332304044233412020000144748 |
Values range from 0 (buried residue) to 8 (highly exposed residue) | |
Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Downloadalignment | 20 40 60 80 100 120 | | | | | | | |||||||||||||
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SS Seq | CCCHHHHHHHHHHHCCCCCCCSSSSCCCCCSSSCCCCCSSSSSSCCCCCCCCCCCCSSSSSSCCCCCCCCSSSSCCCCCCCCCCCCCCCCCCCCCSSSSSCCCCHHHCSSSSSCCCCCCC MRLPAQLLGLLMLWVSGSSGDIVMTQSPLSLPVTPGEPASISCRSSQSLLHSNGYNYLDWYLQKPGQSPQLLIYLGSNRASGVPDRFSGSGSGTDFTLKISRVEAEDVGVYYCMQALQTP | |||||||||||||||||||
1 | 5yd5A | 0.63 | 0.62 | 17.62 | 1.33 | DEthreader | MSCKIGWIGDISNYNGSGGSDIVMTQAAPSVSVTPGESVSISCRSS-KSL-LHRNTYLFWFLQRPGQSPQLLIYRMSNLASGVPDRFSGSGSGTAFTLRISRVEAEDVGVYYCMQHLEY- | |||||||||||||
2 | 6wwcB1 | 0.73 | 0.61 | 17.26 | 1.14 | SPARKS-K | --------------------DVLMTQTPLSLPVSLGGQASISCRSSQSVVYSDGDTYLEWYLQKPGQKPKLLIYKVSRRFSGVPDRFSGSGSGTDFTLKISRVETEDLGVYYCFQGSHVP | |||||||||||||
3 | 4gftB | 0.27 | 0.22 | 6.64 | 0.50 | MapAlign | ---------------------VQLQESGG-GTVQPGGSLKLSCSAAPERA--FSNYAMGWFRQAPGQEREFVAGIGQYYADSVKGRFTISRDNNAVYLQMNSVKAEDTAVYYCAARVVP- | |||||||||||||
4 | 4gftB | 0.26 | 0.21 | 6.42 | 0.26 | CEthreader | ---------------------VQLQESGG-GTVQPGGSLKLSCSAAPE--RAFSNYAMGWFRQAPGQEREFVAGITGYYADSVKGRFTISRDNNAVYLQMNSVKAEDTAVYYCAARVVPV | |||||||||||||
5 | 5yd5A2 | 0.75 | 0.66 | 18.65 | 1.21 | MUSTER | ---------------GGGGSDIVMTQAAPSVSVTPGESVSISCRSSKSLLHRNGNTYLFWFLQRPGQSPQLLIYRMSNLASGVPDRFSGSGSGTAFTLRISRVEAEDVGVYYCMQHLEYP | |||||||||||||
6 | 6wznA | 0.56 | 0.46 | 13.20 | 0.39 | HHsearch | ----------------GAHADIQMTQSPSFLSASVGDRVTITCRASQG-----ISSWLAWYQQKPGKAPKLLIYAASSLQSGVPSRFSGSGSGTDFTLTISSLQPEDFATYYCQQANSFP | |||||||||||||
7 | 6vorB1 | 0.75 | 0.62 | 17.71 | 1.83 | FFAS-3D | --------------------DVVMTQSPLSLPITPGQPASISCRSSQSLVHNNGNTYLTWYQQRPGQPPRRLIYQVSNRDSGVPDRFIGSGAGTDFTLKISRVESEDVGIYYCGQITDFP | |||||||||||||
8 | 7cmuE | 0.74 | 0.67 | 18.90 | 0.35 | EigenThreader | WGQ------------GTVSSDIVMTQATSSVPVTPGESVSISCRSSKSLLHSNGNTYLYWFLQRPGQSPQLLIYRMSNLASGVPDRFSGSGSGTAFTLTISRLEAEDVGVYYCMQHLEYP | |||||||||||||
9 | 5xcsB | 0.66 | 0.55 | 15.68 | 1.62 | CNFpred | --------------------DIELTQSPSSLTVTAGEKVTMSCKSSQSLLNSNQKNYLTWYQQKPGQPPKLLIYWASTRESGVPDRFTGSGSGRDFTLTISSVQAEDLAVYYCQNDNSHP | |||||||||||||
10 | 7k93E | 0.51 | 0.49 | 14.24 | 1.33 | DEthreader | MSCKMHWIGYITKYSEL-GGNIVLTQSPASLAVSLGQRATISCRAS-ESV-DSYYSFMHWYQQKPGQPPKVLIYLASNLESGVPARFSGSGSRTDFTLTIDPVEADDAATYYCQQNNEN- | |||||||||||||
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Top 10 structural analogs in PDB (as identified by
TM-align)
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Top 5 enzyme homologs in PDB
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Template proteins with similar binding site:
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References: | |
1. | Wei Zheng, Chengxin Zhang, Yang Li, Robin Pearce, Eric W. Bell, Yang Zhang. Folding non-homology proteins by coupling deep-learning contact maps with I-TASSER assembly simulations. In preparation, 2020. |