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GPCR-I-TASSER results for job id Q16581

[Click on Q16581_results.tar.bz2 to download the tarball file including all modeling results listed on this page]

  Submitted Sequence

>Q16581
MASFSAETNSTDLLSQPWNEPPVILSMVILSLTFLLGLPGNGLVLWVAGLKMQRTVNTIW
FLHLTLADLLCCLSLPFSLAHLALQGQWPYGRFLCKLIPSIIVLNMFASVFLLTAISLDR
CLVVFKPIWCQNHRNVGMACSICGCIWVVAFVMCIPVFVYREIFTTDNHNRCGYKFGLSS
SLDYPDFYGDPLENRSLENIVQPPGEMNDRLDPSSFQTNDHPWTVPTVFQPQTFQRPSAD
SLPRGSARLTSQNLYSNVFKPADVVSPKIPSGFPIEDHETSPLDNSDAFLSTHLKLFPSA
SSNSFYESELPQGFQDYYNLGQFTDDDQVPTPLVAITITRLVVGFLLPSVIMIACYSFIV
FRMQRGRFAKSQSKTFRVAVVVVAVFLVCWTPYHIFGVLSLLTDPETPLGKTLMSWDHVC
IALASANSCFNPFLYALLGKDFRKKARQSIQGILEAAFSEELTRSTHCPSNNVISERNST
TV

  Predicted Secondary Structure

Sequence                  20                  40                  60                  80                 100                 120                 140                 160                 180                 200                 220                 240                 260                 280                 300                 320                 340                 360                 380                 400                 420                 440                 460                 480
                   |                   |                   |                   |                   |                   |                   |                   |                   |                   |                   |                   |                   |                   |                   |                   |                   |                   |                   |                   |                   |                   |                   |                   |  
MASFSAETNSTDLLSQPWNEPPVILSMVILSLTFLLGLPGNGLVLWVAGLKMQRTVNTIWFLHLTLADLLCCLSLPFSLAHLALQGQWPYGRFLCKLIPSIIVLNMFASVFLLTAISLDRCLVVFKPIWCQNHRNVGMACSICGCIWVVAFVMCIPVFVYREIFTTDNHNRCGYKFGLSSSLDYPDFYGDPLENRSLENIVQPPGEMNDRLDPSSFQTNDHPWTVPTVFQPQTFQRPSADSLPRGSARLTSQNLYSNVFKPADVVSPKIPSGFPIEDHETSPLDNSDAFLSTHLKLFPSASSNSFYESELPQGFQDYYNLGQFTDDDQVPTPLVAITITRLVVGFLLPSVIMIACYSFIVFRMQRGRFAKSQSKTFRVAVVVVAVFLVCWTPYHIFGVLSLLTDPETPLGKTLMSWDHVCIALASANSCFNPFLYALLGKDFRKKARQSIQGILEAAFSEELTRSTHCPSNNVISERNSTTV
PredictionCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHCCCCCCCSSSSSSHHHHHHHHHHHHHHHHHHSSSSSCCCSSSSCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHCCSSSSSHHHHHHHHHHCCCCSSHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSSSSHHHCCCCCHHHSSSHHHHHHHHHHHCCHHHHHSSSSSCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Conf.Score99888898877887776322589999999999999998878986787664245568899999999999999998799999998468988867689999999999999999999999998788872705432577741123310899999999996999852589758903883578876655245433233121023321002220100231067777776540440000025653211336631244317888999999999985357467528616533324234128999999997512757024674267630236777885323168999999999999999999999999999999984544644123677889999999999630999999999853787278999999999999999999999999992599899999999998702423566677887888888787878889

  Predicted Solvent Accessibility

Sequence                  20                  40                  60                  80                 100                 120                 140                 160                 180                 200                 220                 240                 260                 280                 300                 320                 340                 360                 380                 400                 420                 440                 460                 480
                   |                   |                   |                   |                   |                   |                   |                   |                   |                   |                   |                   |                   |                   |                   |                   |                   |                   |                   |                   |                   |                   |                   |                   |  
MASFSAETNSTDLLSQPWNEPPVILSMVILSLTFLLGLPGNGLVLWVAGLKMQRTVNTIWFLHLTLADLLCCLSLPFSLAHLALQGQWPYGRFLCKLIPSIIVLNMFASVFLLTAISLDRCLVVFKPIWCQNHRNVGMACSICGCIWVVAFVMCIPVFVYREIFTTDNHNRCGYKFGLSSSLDYPDFYGDPLENRSLENIVQPPGEMNDRLDPSSFQTNDHPWTVPTVFQPQTFQRPSADSLPRGSARLTSQNLYSNVFKPADVVSPKIPSGFPIEDHETSPLDNSDAFLSTHLKLFPSASSNSFYESELPQGFQDYYNLGQFTDDDQVPTPLVAITITRLVVGFLLPSVIMIACYSFIVFRMQRGRFAKSQSKTFRVAVVVVAVFLVCWTPYHIFGVLSLLTDPETPLGKTLMSWDHVCIALASANSCFNPFLYALLGKDFRKKARQSIQGILEAAFSEELTRSTHCPSNNVISERNSTTV
Prediction44323343131323334243000000010002001202320010000000233110000000000100000000000100000243201001000100000112011000000000000000000000202321121000000000011000001000000202537432200010223122323322222221212222222012010000000000000000000001024221210100010000000100100000000000000000000212122310100000000000000000000000223653211000010126332310100011110120120122110011001012223254433331000000000000100021100000000002241312300100000010000200010000000004600410140022004300344354445344444345445446
Values range from 0 (buried residue) to 9 (highly exposed residue)

   Predicted normalized B-factor


  Top 10 templates used by GPCR-I-TASSER

Rank PDB
Hit		Iden1Iden2Cov.Norm.
Z-score		Download
Align.		                   20                  40                  60                  80                 100                 120                 140                 160                 180                 200                 220                 240                 260                 280                 300                 320                 340                 360                 380                 400                 420                 440                 460                 480
                   |                   |                   |                   |                   |                   |                   |                   |                   |                   |                   |                   |                   |                   |                   |                   |                   |                   |                   |                   |                   |                   |                   |                   |  
Sec.Str
Seq		CCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHCCCCCCCSSSSSSHHHHHHHHHHHHHHHHHHSSSSSCCCSSSSCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHCCSSSSSHHHHHHHHHHCCCCSSHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSSSSHHHCCCCCHHHSSSHHHHHHHHHHHCCHHHHHSSSSSCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCC
MASFSAETNSTDLLSQPWNEPPVILSMVILSLTFLLGLPGNGLVLWVAGLKMQRTVNTIWFLHLTLADLLCCLSLPFSLAHLALQGQWPYGRFLCKLIPSIIVLNMFASVFLLTAISLDRCLVVFKPIWCQNHRNVGMACSICGCIWVVAFVMCIPVFVYREIFTTDNHNRCGYKFGLSSSLDYPDFYGDPLENRSLENIVQPPGEMNDRLDPSSFQTNDHPWTVPTVFQPQTFQRPSADSLPRGSARLTSQNLYSNVFKPADVVSPKIPSGFPIEDHETSPLDNSDAFLSTHLKLFPSASSNSFYESELPQGFQDYYNLGQFTDDDQVPTPLVAITITRLVVGFLLPSVIMIACYSFIVFRMQRGRFAKSQSKTFRVAVVVVAVFLVCWTPYHIFGVLSLLTDPETPLGKTLMSWDHVCIALASANSCFNPFLYALLGKDFRKKARQSIQGILEAAFSEELTRSTHCPSNNVISERNSTTV
15nddA 0.18 0.20 0.84 2.10Download AYIYEFFSVDEFSASVLTGKLTTVFLPIVYTIVFVVALPSNGMALWVFLFRTKKAPAVIYMANLALADLLSVIWFPLKIAYHIHGNNWIYGEALCNVLIGFFYANMYCSILFLTCLSVQRAWEIVNPMGHSR-KKANIAIGISLAIWLLILLVTIPLYVVKQTIFIPQITTCHDVLPEQL-------LVGDMFNYFLSLA------IGVFLFPAFLTASAYVLMIRALADLEDNWETLNDNLKVIEKADNAAQVKDALTKMRAAALDAQKATPPKLEDKSPDSPEMKDFRHGFDILVGQIDDALKLA---NEGK--------------------------VKEAQAAAEQLKTTRNAYIQKYLENSE--KKRKRAIKLAVTVAAMYLICFTPSNLLLVVHYFL-IKSQGQSHVYALYIVALCLSTLNSCIDPFVYYFVSHDFRDHAKNAL--------------------------------
24mbsA 0.24 0.18 0.60 4.12Download -----------PCQKINVKQIAARLLPPLYSLVFIFGFVGNMLVILILIYKRLKSMTDIYLLNLAISDLFFLLTVPFWAHYAA--AQWDFGNTMCQLLTGLYFIGFFSGIFFIILLTIDRYLAVVHAVFALKARTVTFGVVTSVITWVVAVFASLPNIIFTRSQKEGLHYTCSSHFP----------------------------------------------------------------------------------------------------------------------------------------------------YSQYQFWKNFQTLKIVILGLVLPLLVMVICYSGILKTLLRMEEEKKRHRDVRLIFTIMIVYFLFWAPYNIVLLLNTFQENNCSSSNRLDQAMQVTETLGMTHCCINPIIYAFVGEEFRNYLLVFFQ-------------------------------
34n6hA 0.31 0.22 0.61 2.70Download ----------SPGARSASSLALAIAITALYSAVCAVGLLGNVLVMFGIVRYTKKTATNIYIFNLALADALATSTLPFQSAKYLME-TWPFGELLCKAVLSIDYYNMFTSIFTLTMMSVDRYIAVCHPVKALDFRTPAKAKLINICIWVLASGVGVPIMVMAVTRPRDGAVVCMLQ---------------------------------------------------------------------------------------------------------------------------------------------------FPSPS--WYWDTVTKICVFLFAFVVPILIITVCYGLMLLRLRSVRLLSGLRRITRMVLVVVGAFVVCWAPIHIFVIVWTLVDID-RRDPLVVAALHLCIALGYANSSLNPVLYAFLDENFKRCFRQLCRKPCG---------------------------
44ib4 0.22 0.20 0.59 1.53Download ----------------EEQGNKLHWAALLILMVIIPTIGGNTLVILAVSLEKKQYATNYFLMSLAVADLLVGFVMPIALLTIMFEAMWPLPLVLCPAWLFLDVLFSTASIWHLCAISVDRYIAIKKPIQANQYNSRATAFIKITVVWLISIGIAIPVPIKGIET-NPNNITCVLTKE----------------------------------------------------------------------------------------------------------------------------------------------------------RFGDFMLFGSLAAFFTPLAIMIVTYFLTIHALQKKAAISNEQRASKVLGIVFFLFLLMWCPFFITNITLVLCDSCN--QTTLQMLLEIFVWIGYVSSGVNPLVYTLFNKTFRDAFGRYITCNYR---------------------------
55t1a 0.18 0.20 0.80 1.15Download -----------------VKQIGAQLLPPLYSLVFIFGFVGNMLVVLILINCKLKCLTDIYLLNLAISDLLFLITLPLWAHSAA--NEWVFGNAMCKLFTGLYHIGYFGGIFFIILLTIDRYLAIVHAVFALKARTVTFGVVTSVITWLVAVFASVPGIIFTKQKE-DSVYVCGPYFPRG----WNN-------------FHTIMRNILGLVLPLLIMVICYSGISRASKSRINIFIDEGLRLKIYKDTSPSLNAAKSE------LDKAIGR----NTNGVITKDEAKLFNQDVDAA----V-R-------GILRNAK-LKPVYDSLDA--VRRAALINMVFQMGETNSLRMLALATPNRATTFRTYPPPSREKKAVRVIFTIMIVYFLFWTPYNIVILLNTFQEFNCESTSQLDQATQVTETLGMTHCCINPIIYAFVGEKFRRYLSVFF--------------------------------
65t1aA 0.16 0.20 0.87 2.99Download ------------------KQIGAQLLPPLYSLVFIFGFVGNMLVVLILINCKKKCLTDIYLLNLAISDLLFLITLPLWAHSAAN--EWVFGNAMCKLFTGLYHIGYFGGIFFIILLTIDRYLAIVHAVFALKARTVTFGVVTSVITWLVAVFASVPGIIFTKQKED-SVYVCGPYFPRGWNNFHTIMRNILGLVLPLLIMVICYSGISRASKSRINIFEMLRIDEGLRLKIYKDSLNAAKSELDKAIGRNTNGVITKDEAEKLFNQDVDAAVRGILRNAKLKPVYDSLDAVRRAALINMVFQMG------ETGVAGFTNSLRMLQQKR--WDEAAVNLAKSRWYNQTPNRAKRVITTFRTGTWDAYPPPSREKKAVRVIFTIMIVYFLFWTPYNIVILLNTFQEFFGESTSQLDQATQVTETLGMTHCCINPIIYAFVGEKFRRYLSVFF--------------------------------
74djh 0.27 0.25 0.39 1.71Download -------------------PAIPVIITAVYSVVFVVGLVGNSLVMFVIIYTKMKTATNIYIFNLALADALVTTTMPFQSTV-YLMNSWPFGDVLCKIVLSIDYYNMFTSIFTLTMMSVDRYIAVCHPVKALDFRTPLKAKIINICIWLLSSSVGISAIVLGGTKVRVDVIECSLQFPDDDYSFIFAFVIPVLIIIVCYTLMILRLKS-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
84mbsA 0.24 0.19 0.60 4.02Download -----------PCQKINVKQIAARLLPPLYSLVFIFGFVGNMLVILILINYKRKSMTDIYLLNLAISDLFFLLTVPFWAHYAAA--QWDFGNTMCQLLTGLYFIGFFSGIFFIILLTIDRYLAVVHAVFALKARTVTFGVVTSVITWVVAVFASLPNIIFTRSQKEGLHYTCSSHF----------------------------------------------------------------------------------------------------------------------------------------------------PYSQYQFWKNFQTLKIVILGLVLPLLVMVICYSGILKTLLRE---KKRHRDVRLIFTIMIVYFLFWAPYNIVLLLNTFGLNNCSSSNRLDQAMQVTETLGMTHCCINPIIYAFVGEEFRNYLLVFFQ-------------------------------
95o9hA 0.37 0.25 0.61 2.46Download ----------------NTLRVPDILALVIFAVVFLVGVLGNALVVWVTAFEAKRTINAIWFLNLAVADFLACLALPALFTSIVQHHHWPFGGAACSILPSLILLNMYASILLLATISADRFLLVFKPAWCQRFRGAGLAWILCAVAWGLALLLTIPSALYRVVREEPPKVLCGVDHD--------------------------------------------------------------------------------------------------------------------------------------------------------KRRERAVAIVRLVLGFLWPLLTLTICYTFILLRTWSAR-ETRSTKTLKVVVAVVASFFIFWLPYQVTGIMMSFLEPSSPTFLLLKKLDSLCVSFAYINCCINPIIYVVAGQGFQKSLPELLREVLTEESVVR---------------------
105o9hA 0.38 0.25 0.61 3.12Download ----------------NTLRVPDILALVIFAVVFLVGVLGNALVVWVTAFEAKRTINAIWFLNLAVADFLACLALPALFTSIVQHHHWPFGGAACSILPSLILLNMYASILLLATISADRFLLVFKPAWCQRFRGAGLAWILCAVAWGLALLLTIPSALYRVVREEPPKVLCGVDHD--------------------------------------------------------------------------------------------------------------------------------------------------------KRRERAVAIVRLVLGFLWPLLTLTICYTFILLRTWSARE-TRSTKTLKVVVAVVASFFIFWLPYQVTGIMMSFLEPSSPTFLLLKKLDSLCVSFAYINCCINPIIYVVAGQGFQKSLPELLREVL----TEESVVR-----------------
(a)All the residues are colored in black; however, those residues in template which are identical to the residue in the query sequence are highlighted in color. Coloring scheme is based on the property of amino acids, where polar are brightly coloured while non-polar residues are colored in dark shade. (more about the colors used)
(b)Rank of templates represents the top ten threading templates used by GPCR-I-TASSER.
(c)Ident1 is the percentage sequence identity of the templates in the threading aligned region with the query sequence.
(d)Ident2 is the percentage sequence identity of the whole template chains with query sequence.
(e)Cov. represents the coverage of the threading alignment and is equal to the number of aligned residues divided by the length of query protein.
(f)Norm. Z-score is the normalized Z-score of the threading alignments. Alignment with a Normalized Z-score >1 mean a good alignment and vice versa.
(g)Download Align. provides the 3D structure of the aligned regions of the threading templates.
(h)The top 10 alignments reported above (in order of their ranking) are from the following threading programs:
       1: MUSTER   2: FFAS-3D   3: SPARKS-X   4: HHSEARCH2   5: HHSEARCH I   6: Neff-PPAS   7: HHSEARCH   8: pGenTHREADER   9: wdPPAS   10: cdPPAS   

  Top 5 Models predicted by GPCR-I-TASSER

Generated 3D models Estimated local accuracy of models
  • Download Model 1
  • C-score=-1.99 (Read more about C-score)
  • Estimated TM-score = 0.48±0.15
  • Estimated RMSD = 12.0±4.4Å

  • Download Model 2
  • C-score = -2.70

  • Download Model 3
  • C-score = -3.22

  • Download Model 4
  • C-score = -3.49

  • Download Model 5
  • C-score = -3.66



    • [Click on Q16581_results.tar.bz2 to download the tarball file including all modeling results listed on this page]


     Please cite the following articles when you use the GPCR-I-TASSER server:
    J Zhang, J Yang, R Jang, Y Zhang. GPCR-I-TASSER: A hybrid approach to G protein-coupled receptor structure modeling and the application to the human genome, Structure, 23: 1538-1549, 2015.