>PF19226 (359 residues) LFTFKQFSTIYRSDIFNDFKIYHANAWNEFVGISCPEHHVPYYLVHHIFSAIYVCLPVPH VLEPLYTAYELILGETNFWIFCGLTGSSSEFAKFTPKDYTDYLILVDSNNKYHLSSKYCV GHMYQVGPDNKEIMTLNYTVNDHSVTLDLPSEHCKILPLPISKLDFTLLPIEVDVKSSVD VLDCLRVERSSNLHPEKPFFELALDDTTLLTYNTSTNGSHNFAYIWFSSHQFPTKTFHIS SAVNVNPLSWIITGLMSFFYPLLDMLLSSILYIFESVLDIFESHTFLDLFDRLLNVVITI LTRIFQFFVSTIFPRIVDLLNRIPTRYKFLFGLMFVLYLKTTKLLFSFCITVLVHFCIK |
Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | 20 40 60 80 100 120 140 160 180 200 220 240 260 280 300 320 340 | | | | | | | | | | | | | | | | | | |||||||||||||
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Seq | LFTFKQFSTIYRSDIFNDFKIYHANAWNEFVGISCPEHHVPYYLVHHIFSAIYVCLPVPHVLEPLYTAYELILGETNFWIFCGLTGSSSEFAKFTPKDYTDYLILVDSNNKYHLSSKYCVGHMYQVGPDNKEIMTLNYTVNDHSVTLDLPSEHCKILPLPISKLDFTLLPIEVDVKSSVDVLDCLRVERSSNLHPEKPFFELALDDTTLLTYNTSTNGSHNFAYIWFSSHQFPTKTFHISSAVNVNPLSWIITGLMSFFYPLLDMLLSSILYIFESVLDIFESHTFLDLFDRLLNVVITILTRIFQFFVSTIFPRIVDLLNRIPTRYKFLFGLMFVLYLKTTKLLFSFCITVLVHFCIK | |||||||||||||||||||
1 | 3eb7A | 0.07 | 0.05 | 0.64 | 0.61 | DisCoVER | REVYTDPIGAIGASWY-HLFDFITRLSIYTGRSSFSASNYLKKWIG-HQISSQPIGGFDVYKTLSTAGVLFAYGVSKVVFDAIYPDNKYKTTFTYNPGSGIGAQEKDSENYYSHRLNYVTFIRNPDV-----PVFSWTHRQIPVVPISF-N---SSGSTGVIRLNILSQKYRVRIRYCSSVDFDLDVVRGGTTVN---NGRFNKSAFKFASFPFTFQAQDTLKISVRFSSISVVYIDRIELIP-V------------------------------------------------------------------------------------------------------------------ | |||||||||||||
2 | 4a01A | 0.06 | 0.04 | 0.67 | 0.67 | DEthreader | ----------------TI----------EYKYVGIF--MVAFAILIF----------------------LGSVEGFSTSPQACSYDKTKTCKPALATAI-FST------------VSFLLGG-------------VTSVSGG-ANGLLVYIANLFKIYG----------F-YAESSAAVVASSSF-----------LTAM-Y----PLIVSSVILVCLLTMGVVSLTIFNGVQAMYAVLGSTITGIGKGFAIGSAALVSLLFGFGLVGMLYWFSAMTSKEMIP--GA-VMLTPLVVGLFTLSGVLAGSLVSGVQIAISASNTGGADLKDTSGPSLNILIKLMAVES------------- | |||||||||||||
3 | 4mh1A | 0.07 | 0.07 | 0.99 | 0.59 | CEthreader | NIATLSFGEPTRGMALYGTNVYFVSWDNHLVALDMGTGQVVFDVDRGQGDERVSNSSGPIVANGTIVAG-----STGCFVSGHDSATGEELWRNYFIPRARWMTGAWGQITYDPVTNLVHYGSTAVGTLYGTNTRFAVRPDTGEIVWRHQTLPRDNWDQECTFEMMVTNVDVQPSTEMEGLQSINPNAATGERRKTGTMWQFDAETGEFLWARDTNYQNMIESIDENGIVTVNEDAIEYDVCPTFLGGRDWPSAALNPDSGIYFIPLNNVCYDMMNTSNVTKLPPGKDMIGRIDAIDISTGRTLWSVERAAANYSPVLSTGGGVLFNGGTDRYFRALSQETGETLWQTRLATVASGQAI | |||||||||||||
4 | 5wlcLT | 0.07 | 0.06 | 0.86 | 0.80 | EigenThreader | ISSLSFRSVGTSS---GDLIFYDLDR------------------------RSRIHVLKNIHGGVTQATFLTSGGDNSLKEYVFDPSQPPRYLRSRGGHSQPPSYIAFQSHFMLSASKD-RSLWSFSLRKDAQSQEMALAIEWENIITAHKD---------EKRNKTDDGFVSVAMSQCGNFGFIGSS----NGQSGILKYKLHKRA-VTGISLDG---MNRKMVSCGLDGPNGDLLATTHVTGGPRSKMNTLLHLDVIRKRSKKQLREGSQSKSLLATLINFSPAAVDLEIR----SIVWFIDALTQGLKSNYETFMSLLFKAHGDVIHANASALQNWEDVHKLVKFCMGVAAFVTTA- | |||||||||||||
5 | 2wb7A | 0.13 | 0.08 | 0.56 | 0.47 | HHpred | -WY-EDACWVHDKDIDFTLKAETTTAWGHVTGTNDVGG--LGSLPIKFLQS--------LDLSGKWVLYQNKYAGSDFIIITAASPV-HVLYKFLITPNPEYRRVIEGGRELADTTT---GHIGDLTEPTFFGLTAHYTDAPGTLDYHA-LG---LVYAYVERDDGVKIPIWLAAEP------------------------ISVLSNT-------------------------------YTV-KD-----------QDVKNLIDLYKK---KDREKINATTKA--INSLQEKI------------------------------------------------------------------ | |||||||||||||
6 | 3ea5B2 | 0.07 | 0.02 | 0.32 | 0.53 | MRFsearch | ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AFIEDDVFYAISALAASLGKGFEKYLETFSPYLLKALNDSPVSITAVGFIADISNSLEEDFRRYSDAMMNVLAQMISNPRRELKPAVLSVFGDIASNIGADFIPYLNDIMALCVA | |||||||||||||
7 | 4l4hA | 0.09 | 0.09 | 0.94 | 0.72 | FFAS-3D | -----EQSLSVHRTLLHAILLRHSYS-GMYLCCLSSKLAFDVGLQEDTTEACWWTIHPASKQRSEGRYLHLSYGNSSWHVDAAFQQTLWSVAPISSGSEADVLRLLHGHMDECLTVP-------SGEHGEEQRRTVHYEGGAVSWRLETLRVAWSGSHIRWGQPFRVTTGKYLSLMKNLLLMDKEKADVKSTAKEGMGTSEIKYGDSICYIQHVDTGQAVDQRKAIMHHEGHMDDGLNLSRSQHEESRTAVIRSTVFLFNRFIRGLIESVSLSLQDLIGYFHPPDEHHEDKQNRLRALKNRQNLFQEMINLVL-ECIDRLHVYSSAAHFADVAAGESWKSILNSLYELLAALI------ | |||||||||||||
8 | 4l4hA | 0.12 | 0.11 | 0.94 | 0.65 | SPARKS-K | LCFLESTSN--SKNVPPDFVLEQSLSVHRTLLY-----GHAILLRHS-YSGMYLCCL-STSKLAFDVGLQEDTTGEACWWTIHPASKQRSDLILVSVSSERYLHLSYGNSSWHVDAALIGGDVLRLLHGEEQRRTVHYEGGAVSWRLETLRVAWSGSHI------RWGQPFRLRHVTTGKYLSLMDKEKADVSKEGMGTSEIKYGDSICYIQHVDTGLWLTYRKAIMHHEGHMDDGLNLSRSQHEERVIRSTVFLFNRFIRGLDALIESVSLSLQDLIGYFLEHEDKQNRLRALKNRQNLFQEEG---MINLVLECIDRLHVYSSAAHFADVAAGESWKSILNSLYELLAALIRG---- | |||||||||||||
9 | 1h6kA | 0.10 | 0.03 | 0.30 | 0.69 | CNFpred | -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ESNLEGLAGVLEADLPNYKSKILRLLCTVARLPEKLTIYTTLVGLLNARNYNFGGEFVEAMIRQLKESLKAN-NYNEAVYLVRFLSDLVNCHVIAAPSMVAMFENFVS | |||||||||||||
10 | 7kbtA | 0.08 | 0.06 | 0.72 | 0.67 | DEthreader | RQSPWMLGPTIQAEDTVVVLASEGAEYEDDKVLPGKQTY-LSHVDLVKDLNLIGAL------LTLHEFVLNGYVNRSLPGLIG---C--H-----------------KSVYWHVIG---M-GTSP------EVH-----------------EISPTLAQTFLDGQFLLFCHIS-FESGILGPLL-YGEVTLITVTVEDGPDPRC--LTRYYSSFV----GPLLIILSFLSLTIHSIHFSGHVPSKVGIV-NSC-MPLGMSKAISDIPSKAR-LQGRSN------------VKSLLTSMYVNQDSFTPVV---N--SL--D-------PP--LLTRYLRI-HPQIALRMEVL--G--C-- | |||||||||||||
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References: | |
1. | Wei Zheng, Yang Li, Chengxin Zhang, Robin Pearce, S. M. Mortuza, Yang Zhang. "Deep-learning contact-map guided protein structure prediction in CASP13." Proteins: Structure, Function, and Bioinformatics, 87: 1149-1164 (2019). |