>PF19220 (401 residues) IGQRDEVVRQRIDAMVDRLDDLRSLQDDFVLILQPLASISSELSKASVRIAELENTLTQE VSANGNLRDEVADLSTKLSRMNSELADSQVHAKRTLESLRERDAAVEAHQIDLRDKVSAI ENLERQLFSEVEQNKALTSESRALRQEAQAADSALARSEHELNNVRERNSLLEVEGRRLQ LLSEEQATQLADLDARHRDLTTTAEADRQRLRIVETQLATEISVRERNEAQHETELSALR NDRASLAMKLEAALNRATSTEQLLVQARNQLRDKDEEFRSVDRNFKEATIARSTLERRLE ALQADLSRQTERFLEIQRIRGELDSRCDMLNKALAAKDAAIEQTTNRNAVLNDRIEHLTH RHEAARADLEASNRRLMEELQNERSERALLQGALDIARESR |
Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | 20 40 60 80 100 120 140 160 180 200 220 240 260 280 300 320 340 360 380 400 | | | | | | | | | | | | | | | | | | | | | |||||||||||||
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Seq | IGQRDEVVRQRIDAMVDRLDDLRSLQDDFVLILQPLASISSELSKASVRIAELENTLTQEVSANGNLRDEVADLSTKLSRMNSELADSQVHAKRTLESLRERDAAVEAHQIDLRDKVSAIENLERQLFSEVEQNKALTSESRALRQEAQAADSALARSEHELNNVRERNSLLEVEGRRLQLLSEEQATQLADLDARHRDLTTTAEADRQRLRIVETQLATEISVRERNEAQHETELSALRNDRASLAMKLEAALNRATSTEQLLVQARNQLRDKDEEFRSVDRNFKEATIARSTLERRLEALQADLSRQTERFLEIQRIRGELDSRCDMLNKALAAKDAAIEQTTNRNAVLNDRIEHLTHRHEAARADLEASNRRLMEELQNERSERALLQGALDIARESR | |||||||||||||||||||
1 | 2tmaA | 0.14 | 0.10 | 0.71 | 2.72 | FFAS-3D | ------------------------------------------MDAIKKKMQMLKLDKENALDRAEQAEADKKAAEDRSKQLEDELVSLQKKLKGTEDELDKYSEALKDAQEKLELAEKKATDAEADVASLNRRIQLVEEELDRAQERLATALQKLEEAEKAADESERGMKVIESRAQKDEEKMEIQEIQLKEAKHIAEDADRKYEEVARKLVIIESDLE----RAEERAELSEGKCAELEEEIKTVTNNLKSLEAQAEKYSQKEDKYEEEIKVLSDKLKEAETRAEFAERSVTKLEKSIDDLEDELYAQKLKYKAISEELDHALNDMTSI----------------------------------------------------------------------- | |||||||||||||
2 | 6yvuB | 0.12 | 0.12 | 1.00 | 1.60 | SPARKS-K | EKMKFQESLKKVDEIKAQRKEIKDRISSCSSKEKTLVLERRELEGTRVSLEERTKNLVSKMEKAEKTLKSTKHSISEAENMLEELRGQQTEHETEIKDLTQLLEKERSILDDIKLKESQIQLAESELSLLEETQAKLKKNVETLEEKILAKKTHKQELQDLILDLKKKLNSLKDERSQGEKNFTSAHLKLKEMQKVLNAHRQRAMEARSSLSKAQNKSKVLTALSRLQKSSVPEEVDKIERELSERENNFRVASDTVHEMEEELKKLRDHEPDLESQISKAEMEADSLASELTLAEQQVKEAEMAYVKAVSQLNVVMKNLERLRGEYNDLQSETKTKKEKIKGLQDEICQKLDILVAKLKKVKSASKKSGGDVVKFQKLLQNSERDVELSSDELKVIEEQL | |||||||||||||
3 | 2tmaA | 0.18 | 0.12 | 0.65 | 1.31 | CNFpred | KENALDRAEQAEADKKAAEDRSKQLEDELVSLQKKLKGTEDELDKYSEALKDAQEKLELAEKKATDAEADVASLNRRIQLVEEELDRAQERLATALQKLEEAEKAADE------------------------------------------------------------------------------------SERGMKVIESRAQKDEEKMEIQEIQLKEAKHIAEDADRKYEEVARKL-------------------------VIIESDLERAEERAELSEGKCAELEEEIKTVTNNLKSLEAQAEKYS----------------------------QKEDKYEEEIKVLSDKLKEAETRAE----FAERSVTKLEKSIDDLEDELYAQKLKYKAISEEL | |||||||||||||
4 | 5j1iA | 0.13 | 0.11 | 0.85 | 1.13 | MUSTER | -----SRCQRCISELKDIRLQLEACETRTVHRLRLPKEPARECAQRIAEQQKAQAEVEGLGKGVARLSAEAEKVLAAAPTLRSELELTLGKLEQVRSLSAIYLEKLKTISLVIRGTQGAEEVLRAHEEQLKEAVPATLPELEATKASLKKLRAQAEAQQPTFDALRDELRGAQEVGERLQQRHGERDVEVERWRERVAQLLERWQAVLAQTDVRQRELEQLGRQLRYYRESADPLGAWLQDARRRQEQIQAMDSQAVREQLRQEQALLEEIERHGEKVEECQRFAKQYINAIKDYELQLVTYKAQLEKVQSGSESVIQEYVDLRTHYSELTTLTSQYIKFISET--------------------------------------------------------- | |||||||||||||
5 | 6ek7A | 0.10 | 0.05 | 0.53 | 0.59 | DisCoVER | LKLYVRKGL-SL--PT-RQDEVEAYLGYKKIDVAGL----------------PKDIKLLFDEIHNHA---L--W-------------------------------------------------------------------------------VEQAVLQQS--L--DL--D--IA--AKNIISTGNEII-LRVKTL--LGDITDHQTTTENVRKKVSDYRITLT--LEPQVKTKYDLME-----------------------------SN--MRKSIKELDEKI------------------------------------ALISEVAELESKVSSQRALQTALSDIGIRMVDAESALNHLDFMWLSVLNQIT-NNALRLTSFVFQQVIWQSVGDSARLV- | |||||||||||||
6 | 6sl2A | 0.12 | 0.06 | 0.54 | 0.67 | DEthreader | ---------WVNMHLAKKGRKINDVTTDFKGLTGLVWTLILRAIKLWCFSFFAFDKLDVDDI----DERSVMTYVAALYKVFSSNDQVEKAGKRAGNFLDLLRATEGMVHDYERIKEQGLYIANISEAERALRSKLNTAMRNCLIALRKAADPANATDAKINEYRFTLAKLEE---------------------------NEASSGV-TAEQM-E----------------------------------------------------------------------------------------------NG-VSFDNYVQY-MENDEN-SP---MSEQIEYVALPQGDGYDYAAWV-KT------------------------------------------ | |||||||||||||
7 | 6z9lA | 0.08 | 0.08 | 1.00 | 0.74 | CEthreader | VTAAKQEQAKLEELAKNAEAEKVKAEKEQAAKEAELANKQKEEAKAKDQKTKDDQAVADQQTVVTTSQEKVTDAKADTAAKQADLTAKENALKDKQAATKQAQNTLDNSKEELKGHDYDTKLSAEEIATLEKTALEMNKNFPTSKEDEKNKDVMWDIQHLSADQKKELSVYTTELLNDVRKKLDQSIKFAWDIAKYVIAINKAAKEKYTLQESIRKMLVNMLFDDGRLGYSHLHSLLQDGKTGKEKLEDSSQYQNGEVASMKSKEELQQEIASNQEKLATAQQAESDAQQARSASQQALNTAKTTQATAEKELSVHKATLANLQAVATKSTTNYEEKVRQTATAEKSLQQTKDQLATINELIQNRAAVLEKAKTNVAEAQAIEQTSAKVLKEKQEAQKAEE | |||||||||||||
8 | 4e40A | 0.09 | 0.05 | 0.57 | 0.85 | EigenThreader | ELEDSDDVAAACELRAQLAGASGILLRPAVIRNATTEFSRKKSEDILAKGGAAVERASAAVDRVQKVRKAAAVAHHALEHVKEEVEIVAKKVNEIIELTAGATEHAKGAKANGDASAVKVSNLLARAK--------------------------------------------------------------------------------ESENQYVKEAAEECS---------------------ESTNYDVTAKSLAAALDKLPGVKEDNAV------KTTFQSILTSLDNLDKDVKSVEQRAEELETALEKAERQLEKAEKAAEEAETESSKV------------------------------------------------------------------- | |||||||||||||
9 | 2tmaA | 0.16 | 0.11 | 0.68 | 0.88 | HHpred | -----------------------------DAIKKKMQMLKLDKENALDRAEQAEADKKAAEDRSKQLEDELVSLQKKLKGTEDELDKYSEALKDAQEKLELAEKKATDAEADVASLNRRIQLVEEELDRAQERLATALQKLEEAEKAADESERGMKVIESRAQKDEEKMEIQEIQLKEAKHIAEDADRKYEEVARKLVIIESDLERAEERAELSEGKC-----------AELEEEIKTVTNNLKSLEAQAEKYSQKEDKYEEEIKVLSDKLK-------EAETRAEFAERSVTKLEKSIDDLEDELYAQKLKYKAISEE---------------------------------------------------------------------------------- | |||||||||||||
10 | 6yvuB | 0.12 | 0.12 | 1.00 | 0.52 | MRFsearch | --MKFQESLKKVDEIKAQRKERRELEGTRVSLEERTKNLVSKMEKAEKTLKSTKHSISEAENMLEELRGQQTEHETEIKDLTQLLEKERSILDDIKLSLKNISAEIIRHEKELEPWDLQLQEKESQIQLAESELSLLEETQAKLKKNVETLEEKILAKKTHKQELQDLILDLKKKLNSLKDERSQGEKNFTSAHLKLKEMQKVLNAHRQRAMEARSSLSKAVDKIERELSERENNFRVASDTVHEMEEELKKLRDHEPDLESQISKAEMEADSLASELTLAEQQVKEAEMAYVKQNSKVESVCQKLDILVAKLKKVKSASKKSGGDVVKFQKLLQNSERDVELSSDELKVIEEQLKHTKLALAENDTNMNETLNLLKEQSEQLKEQMEDMEESINEFKSIE | |||||||||||||
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References: | |
1. | Wei Zheng, Yang Li, Chengxin Zhang, Robin Pearce, S. M. Mortuza, Yang Zhang. "Deep-learning contact-map guided protein structure prediction in CASP13." Proteins: Structure, Function, and Bioinformatics, 87: 1149-1164 (2019). |