Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80
| | | | |
| Seq | VLIHETNGHIEQIELDIAPHKNEIFTIIGGTQTFIGQWPDIDVVILKAESSTSSTNENKLPKPFEIEEVNGKILLVRMDENSEHQDFTLDEYKLF |
1 | 3htxD | 0.08 | 0.07 | 0.97 | 1.17 | DEthreader | | AVYIPCEVVELDTLYISSRHLDSIAERGLKQVMISRMFGKSECRLYSEIPKIVKRNARSYI--CG-QDIHGDAILASVGYRLDYDDVTVNSFYRI |
2 | 3htxD | 0.12 | 0.12 | 0.97 | 1.33 | DEthreader | | AVYIPCIDVVELDTLYISHYLDSIAERLGLQVMISRMFGKSECRLYSEIPIVKSRNAASY---ICGQDIHGDAILASVGYRLDYDDVTVNSFYRI |
3 | 5u70A3 | 0.05 | 0.03 | 0.63 | 0.78 | DisCoVER | | VYHIRMGD-SKFF--------------MEYEGKSFTYAF-YGVCLIGI-------RRELLNPGPRHIMASDTCFYINI--------TKEFI---- |
4 | 3htxD4 | 0.07 | 0.06 | 0.88 | 1.00 | DEthreader | | AVYIPCEVVELDTLYISSRHLDSIAERGLKQVMISRMFGKSECRLYSEIPKIVKRNARSYI--CG-QDIHGDAILASVGYRLDYDDV-------- |
5 | 6a5fA | 0.02 | 0.02 | 0.99 | 0.57 | CEthreader | | FLAPGSHAQAGWRVGIDDGMLEASGGTWSMQPVTLLINNEDGYSIDANRIHAVRKGAPDGSTSPFDVLDISGVQMLKWEN-GKVVEGAGGIFGDG |
6 | 3s6bA | 0.05 | 0.04 | 0.92 | 0.63 | EigenThreader | | SCSVNEKSGDNIDISVFYKGTLIDAYVSKKNFSVVHGVGKLFHIEINQGH----YSDPDQ----WTSATSLSAQFTLLITNNGLTKRTQDSPPLG |
7 | 4nzrM3 | 0.17 | 0.13 | 0.75 | 0.30 | HHpred | | ------FEDVKTLAIDAK-DISALKTTIDEKPT--------YLIIRGLSGNGSQLNELQLPESVKKVSLYGDYTGVNVAKQANVVE--------- |
8 | 2wp8J1 | 0.15 | 0.08 | 0.56 | 0.40 | MRFsearch | | --------------------TARVMGGLKNGVLYQGNIQIKPVLIVGQKNL--------------NRAFNGDQVIVELL--------PQSEWKAP |
9 | 6g7dA2 | 0.07 | 0.06 | 0.84 | 0.34 | FFAS-3D | | ------RTPLRFLFIDGGHTEEAAQRDFDGWARWVEV---GGALVIHDVFPDPKDGGQAPTGDFREVNAYGSMRVLERTSGIAGQPLKL------ |
10 | 6rfgA | 0.15 | 0.15 | 0.99 | 0.78 | SPARKS-K | | NIFLETDAGRVKFAIKNTDDVNKFVELLSEQSEFYLVVKDKDIFYFKCDRGSISIVNNEFY-VFDFTNVTGVEFIVTMPCRIIPKNNHAVISVVT |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
|