>PF19207 (273 residues) DPREQETIDEVRATGVLPYAREAIARREDAHDRAVVRNLIECLVDACKEKATDADGTPLS PPEPLGPVGSDVVVPYLFDVALSFADSAEVRACLAPDGVTWSAYRADPWHSIKPSYVGMA GNPWCTYPGCPETRCKSCTLILAAVGVNDPTDPARAIAHRWPIGVRWTWTHAQMEDQMIA RLRYRPDFMVETSTMRTVTSKPAQGVNVMHGTGDMWDGGQDEAWYVAVAQRATRDWGDGG GPALAAHDCVVGLAEARHALSRLEFAVRHWRLD |
Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | 20 40 60 80 100 120 140 160 180 200 220 240 260 | | | | | | | | | | | | | | |||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Seq | DPREQETIDEVRATGVLPYAREAIARREDAHDRAVVRNLIECLVDACKEKATDADGTPLSPPEPLGPVGSDVVVPYLFDVALSFADSAEVRACLAPDGVTWSAYRADPWHSIKPSYVGMAGNPWCTYPGCPETRCKSCTLILAAVGVNDPTDPARAIAHRWPIGVRWTWTHAQMEDQMIARLRYRPDFMVETSTMRTVTSKPAQGVNVMHGTGDMWDGGQDEAWYVAVAQRATRDWGDGGGPALAAHDCVVGLAEARHALSRLEFAVRHWRLD | |||||||||||||||||||
1 | 4i14A | 0.07 | 0.05 | 0.66 | 0.57 | DisCoVER | ------------------------------------TRLD-SV-----------------------RAVADIAGKAVIVID-DEDRENEGDLIFAAEKALCVPLDGAICDRLGTVDARTMRLLAVPLRAKDGGVRPGHTEAAVDLARMAG-------LQPAGAICEIAHTDEITIADLIEWRRK-HEKHI-ERVAEARIPT--HGEFRAIGYTSIY---EDVEHVALVRGEVHLAVAREGRGVVLYMRIGAQIDGY----------------- | |||||||||||||
2 | 1yiqA1 | 0.06 | 0.05 | 0.79 | 0.83 | DEthreader | ---------A--DIPANVD-GARIIAADKEPGNWGRTQRSEATPIYTTGPFSPQSDR-NGVVGKVYEAIQRAWS----------RSYTITGAPRVVNGKVVIGNGGAFGVRG-YVTAY-AETGK-EAW-RFYTVPGGTAWDSFAYDPNLVYWHYQMILA----LMQAPK-AFWGAHDWQPMSYNGLVYIAHIMSGKLIAWDKQQAAWEVPYVTNSAD-G-RVI--AY--AAD-G------------------MAAPVTFMAGWGVQPYAEPAP | |||||||||||||
3 | 1vt4I3 | 0.07 | 0.07 | 0.99 | 0.64 | CEthreader | GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG----GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG | |||||||||||||
4 | 3u9rB | 0.09 | 0.08 | 0.94 | 0.57 | EigenThreader | IN-------------PRSAEFAANAATMLEQVNALRTLLGRIHEAAQARHSARGKLLVRERINRLLD---PGSPFLELSALAAVAAAGIVAGIGRVEGVCMIVGNDATVKGGTYYIYLVDSGGAGSCTAGGAYVPAMSDETVMVREQATIGADVHCKVSGVADHYAEDDDHALAIARRCVANLNWRKQGFKTLVCGFAHLHGYPIAILANNGILFAEAAQKGAHFIELACQRGIGVMGGEQAAGVLAQVKREQAERAQTREVLALALSAALNA | |||||||||||||
5 | 2eabA3 | 0.17 | 0.10 | 0.59 | 0.32 | HHpred | ------------------------GTDGNTYESSLVWQMLNDAIEAAKAKGDPDG---------LVG---NTTDCSADNWAK--NDSGNFTD--ANANRSWSCAK---SLL-KPIEVGDSGQ------------------IKEWYFEGASGYQ-ADNQHRHMSHLLITIDNSEY--MDAA--KTSL----RYR--------C------FKGNVQS-NTGWAIGQRINSWART----GDGN----TTYQLVELQLK------------------ | |||||||||||||
6 | 6wmrZ | 0.09 | 0.04 | 0.49 | 0.33 | MRFsearch | --NLTKQINQFQILMMMDIEELKQVNLETQAKKEMIEANLRLVVSEAKKYTN--------------------------------------------------------------------------------------------------------------RGLHFLD---IIQEGNIGLMKAVDKFDYR------------KGFKFST---------YATWWIRQAITRSIADQARTIRVPVHMIETINKVNRIKRQIEKLKKILNISH-- | |||||||||||||
7 | 6p4oB | 0.09 | 0.08 | 0.91 | 0.43 | FFAS-3D | -KEREDIIQKVSKKLGADIMRFVFSDLDEEYNLSLLQTLLKEIIRRAKWLGLYDKPLPATLVKLTEKYGRNLALQFII-----SSQNWKIEAELVLGKKFKYKLKLANFKELKELVIDEVIKGWKIIREPEPLVVDN--------RVFIPDFLVEKGNLKVYVEIVGFWTKEYIKEKLDKLKKVKYPILILLNEELGKEKFNGMNVITYKRK-------IDISLVYKWLRELENKYLNEVKVDYTISGDIISLNEIASKLSLPVEVIRK---- | |||||||||||||
8 | 6rreB | 0.12 | 0.10 | 0.83 | 0.58 | SPARKS-K | YGCERQAVFSFIDNYVLPLIDNFSLDLTRYDSKKVTESLIHTIYSLRSKHAP------------------LAEFTMSLCVTYQK-DEQLFCAGFGIGDTGIAIKRNEGTIEQLVCHTEVDGFKDAFDNYSSANIDLVIERNSVFNTKVMPGD------------ELVGYT-------------YVPPMLE--MTEKEFEVETRIVRHLNLDPGNFDDKDPLFSQLLQVVKSKQKQLVETGQIQRFGDDFTVGRQLLINQLRIHALSIGVSDGL | |||||||||||||
9 | 4fx5A | 0.09 | 0.07 | 0.70 | 0.55 | CNFpred | EDWEPKELRKIADAGTVGIIRDPA----------TLAEDFREMTAKSMGK---------------------EVADVALRLWAPKATIRYVKQVSPN----LADLSGMRVPGDNPLTGDYPTGAWGAE---------SREYHICVEVEPG--------QEKLAGRVQLVAKDA--------------------GGATLLGEG---KIRAVWTETDLSTRINGRVAHYTGQAEMAAA-------IQEGLDAQADLDTATARLGRAMDLAVESGHE | |||||||||||||
10 | 4a01A | 0.05 | 0.03 | 0.73 | 0.83 | DEthreader | --KDVGADLVGKVERIPDPNAVIADNVGDNGDIAGMGSDLFGSYAESSCAALVVASS-----------------------TAMLY-LIVSS-------------VG----ILVCLLTTLFATDF------PALKKQLVSTMTGVAVSFVALPTSKSWQLFLCVVGWAIIVVIIPIFII--LIVGAMLPYWF----------------------SAMTMKSVGSAALKMVEEVRRQ-NTIPAKPDYATCVKISTASIMPDTSGPSLNILIKMAS | |||||||||||||
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References: | |
1. | Wei Zheng, Yang Li, Chengxin Zhang, Robin Pearce, S. M. Mortuza, Yang Zhang. "Deep-learning contact-map guided protein structure prediction in CASP13." Proteins: Structure, Function, and Bioinformatics, 87: 1149-1164 (2019). |