>PF19203 (228 residues) MWSQFIAILSQSMPIGVCRKYPVCQTHLKKLKAADLSQESKDSETAAMTEYISSNRPWGQ GSYPSKGYVSPVSGCTLHFGNVSTLHPDSAALDGRLREMAEVLGVQDYASAPVRVSSTGY IDKVKGMVYEIDGLESMSMADLMGCTQLHQLAGKVASDIQSGAVNHREFAGEILSSLVGP LRELLPKEDCDSIVSILEKVRDGEAVSAEELIPLMNKFQEAGLVPGVL |
Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | 20 40 60 80 100 120 140 160 180 200 220 | | | | | | | | | | | | |||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Seq | MWSQFIAILSQSMPIGVCRKYPVCQTHLKKLKAADLSQESKDSETAAMTEYISSNRPWGQGSYPSKGYVSPVSGCTLHFGNVSTLHPDSAALDGRLREMAEVLGVQDYASAPVRVSSTGYIDKVKGMVYEIDGLESMSMADLMGCTQLHQLAGKVASDIQSGAVNHREFAGEILSSLVGPLRELLPKEDCDSIVSILEKVRDGEAVSAEELIPLMNKFQEAGLVPGVL | |||||||||||||||||||
1 | 5cowA | 0.05 | 0.04 | 0.68 | 0.62 | DisCoVER | AVNFIVGCQFFFLVTRTLAHDRELAKLVQTL----I----PRPVRLEV------FPGLQRSVFK--SSVFLGHHIIQMLAQDFECPWRRLAIAELLKKFSVSVVLIPLILVTNAL-------------------RF------------------AL--WIVEFY-----ET--ETKSIK-ELAFL-SSKTLLIESFTKFLQGKDVKDQDHLKRII-DA--LEK----- | |||||||||||||
2 | 4he8N | 0.06 | 0.04 | 0.70 | 0.83 | DEthreader | ------------------MTLAILAVFSVALTLLGPVKRATLLGLALALASLLLTWG---KPFAF-G---------PYAV--D-----GV-SQVFTLLALGAALGLLLVAELSLGKAALAKASVVGNLAALQKEA--LL--S------AHAGYMALALYTGNAQALGFYLLTYVLATGLAFAVLQDLRAVVAAGVLLLALGLLPLVL-AL------------------ | |||||||||||||
3 | 3gjxA3 | 0.13 | 0.13 | 1.00 | 0.49 | CEthreader | VAENFVPPLLDAVNVPAAREPEVLSTMAIIVNKLGGHTAEIPQIFDAVFECTLNMINKDFEEYHRTNFFLLLQAVVLDSIIWAFKHTMRNVADTGLQILFTLLQNVAQEEAAAQSFYQTYFCDILQHIFSVVTDTSHTAGLTMHASILAYMFNLVEEGKPGNPVNNQMFIQDYVANLLKSAFPHLQDAQVKLFVTGLFSLNQDIPAFKEHLRDFLVQIKEFAGEDTSD | |||||||||||||
4 | 5flzB | 0.09 | 0.09 | 0.99 | 0.60 | EigenThreader | QNYTAFVNNLVSSGTVVS---LKSLYREIYENIIRLRIYCRFTEHLEYYEYLMNWLTKGLLRATYGEFFIYHIPIEFNQELAYKIFMIGKSYIFLEKYCKKYHVLYQSNSYRGIMGKSDFMDALIEKANDILATPSDSLPNYKLTRVLQEAVQLSSLRHLMNSPRNRFKKNNYFYQKEMLKSNDIIRQFQQFNSKMESYYLNCIQPYPTSLVLLLNSVYEFVKVYCNL | |||||||||||||
5 | 6ff6A | 0.12 | 0.10 | 0.81 | 0.29 | HHpred | FYQTFFDEADE--------------------------------LLADMEQHLLDDAEQLNAIFRAAHSIKGGAYAVELMENMLDFQNTDNLFLELKDLMQRMLDY--YKNKPQSF-YQAFFDMMLKVMEQLLKLDAAMLNAIFRA--AHFIKGAAGT---FGFTILQETTHLMEN-LLDEARRGLNTDIKDIMQEQLDAYKNSEEPDAASFEYICNALRQLALEA--- | |||||||||||||
6 | 6tc0C | 0.09 | 0.07 | 0.85 | 0.48 | MRFsearch | --TKCFAGLLNKQPPGQ-QLEEFLQLAVGTVEAGLASESSRDQAFTLLLWVTKAL------------------LSACLTTRLMGLLSDPELGCAAADGFSLLMS-------VRIMFRQRFFTDNVPALVQGFPNYLKGLSHVLNLPELPTLLSLLLEALSCPDSVVQLSTLSCLQPLLLEAPQIMSLHVDTLVTKFLNLSSSYSMAVRIAALQCMHALTRL------- | |||||||||||||
7 | 1uddA | 0.14 | 0.11 | 0.83 | 0.66 | FFAS-3D | MRVMITDKLRRDS----EQIWKKIFEHVVQLYSGTLPLEKFKFYVLQDFNYLVG--------------------LTRALAVISSKAEYPLMAEENYVKLLKELDLEDAIKTEPTLVNSAYMDFMLATAYK--GNIIEGLTALLPCFWSYEIAEYHKDKLRDNPIKIKVYLSNEYLNLVGRLRKISGHSGYDRLRRIFITG-------SKFELAFWEMAWRGG------ | |||||||||||||
8 | 4uosA | 0.14 | 0.11 | 0.78 | 0.60 | SPARKS-K | ---------------------GDNEEVKKMLEKMIEEKKMLEKAIKKVKEMLEKMIKEIKKMLENGE--------------------DSEKILKKAKEMAEKILKMVIELAEKILKKKEMAEKILKKVKELGV----------DNEEVKKMLEKMIEEIKKMLEKAIKKVKEMLEKMIKEIKKMLSEKILKKAKEMAEKILKMVIELAEKILKKAKEMAEKILKKVKE | |||||||||||||
9 | 4a0cA | 0.09 | 0.09 | 0.93 | 0.76 | CNFpred | CCFNMLTELVNVLPGALTQHIVLVPGIIFSLNDKSSSSNLKIDALSCLYVILCNH--------SPQVFHPHVQALVPPVVACVGDP-FYKITSEALLVTQQLVKVIRPLDQPSSFDATPYIKDLFTCTIKRKERAISCMGQIICNLGLPNTLQIFLERLKNEI--TRLTTVKALTLIAGSPLKIDLRPVLGEGVPILASFLRKNQRLKLGTLSALDILIKNY------ | |||||||||||||
10 | 5yfpD | 0.08 | 0.06 | 0.79 | 0.83 | DEthreader | ISHNGFTSLYLY----DNHFGL-PV-QDILS---------I-ILRECFWEIFLLELLVRYINDLISSN-----------------VPPS-VFNMKVILDPFLLFTQTFFDDYKSPKIMTMDYLFTVEVES-NNPY---ENHNIFKTALDFQRLFYNLNVFNTKIYCILDLLNHFYNYYLGLFNLIWLQI------K---LDDKASFDETIDGFKTLKFKLITI-LQLP | |||||||||||||
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References: | |
1. | Wei Zheng, Yang Li, Chengxin Zhang, Robin Pearce, S. M. Mortuza, Yang Zhang. "Deep-learning contact-map guided protein structure prediction in CASP13." Proteins: Structure, Function, and Bioinformatics, 87: 1149-1164 (2019). |