>PF19192 (190 residues) FLQTILMIDDEAFRRETGATTLPPDENWDESEGASVGSPLKLVAPSASVEGDELDVQAVS RSFAEEALACAILSPQSLQENEDFRPAFVATAKRADALILDWNLNGDNGATAEKLIKAVL RNDTKSPRRRLRLLTIYTGEPDLTQIAERVSKATTESLPEDELKWDDDRRRVAFSRGPLR VAVFAKEHVR |
Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | 20 40 60 80 100 120 140 160 180 | | | | | | | | | | |||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Seq | FLQTILMIDDEAFRRETGATTLPPDENWDESEGASVGSPLKLVAPSASVEGDELDVQAVSRSFAEEALACAILSPQSLQENEDFRPAFVATAKRADALILDWNLNGDNGATAEKLIKAVLRNDTKSPRRRLRLLTIYTGEPDLTQIAERVSKATTESLPEDELKWDDDRRRVAFSRGPLRVAVFAKEHVR | |||||||||||||||||||
1 | 1e5dA2 | 0.09 | 0.06 | 0.64 | 0.52 | DisCoVER | -TNKVVIFYDSM------------------------------------WHSTEM-ARVLAESFRDEGCTVKLMWC-----KACHHSQIMSEISDAGAVIVGSPTHNGILPYVAGTLQYIKGLR-----PQNKIGGAFGSFGWSGESTKVLAEWLTGM-------------------GFDMPAPVKVNVP- | |||||||||||||
2 | 5ck3B | 0.09 | 0.07 | 0.82 | 1.00 | DEthreader | -P-SVLLIGAKTALTL-ERGPLL-----------------NP-DGTSPVAQ-----TSVELAVGTARKFLLIDTPGHPKLRGTTLQHLLLTISKLKAVIFLLDALYLSASYLYDVLLSLQKRFHSRKAPSSIPVLIAANKAVASLVKSRLEHLGRWLGAVFKFE--------EMMEFDMEVEVMGGNGPG | |||||||||||||
3 | 5vtoA | 0.10 | 0.08 | 0.81 | 0.54 | CEthreader | GVRSVFLAGPFMGLVNPE--------------------------TNSMPSAEQLPFLTLIEHFEKQGLEVFNAHRREALTPEECTPLDQLEIRKADVFVAIPGIP--PSPGTHVEIGWASAFD--------KPIVLLLEEGREEEYGFLVRGLGTVAAVEFVHYKDIALAKPQIDAAIRKVVDRVNNPAA | |||||||||||||
4 | 6jfkA | 0.11 | 0.09 | 0.84 | 0.52 | EigenThreader | RRHMVAFFGRAMLWDKVLPSGIGHTTNCGSEEKTVNQLAHALHQDKQLHAGSSKCPLLKD-------DLVLMDSPGIDVTTE--LDSWIDKFCDADVFVLVANSESTLMQTEKHFFHKVSERLS----RPNIFILNNRWDASASEHMERCTSFLVDELGV-----------------VDRIFFVSGMPEG | |||||||||||||
5 | 4s04A | 0.14 | 0.09 | 0.64 | 0.44 | HHpred | -----------------------------------------------VIEDDALLLQGLILAMQSEGYVCDGVSTAHE-----AAL-SL-ASNHYSLIVLDLGLPDEDG---LHFLSRMRREK-MTQ-----PVLILTARDTLEDRNARIRALLRRHNNQGDNEISVG--NLRLNVTRRLVWLGETA--- | |||||||||||||
6 | 2oqrA | 0.20 | 0.12 | 0.61 | 0.27 | MRFsearch | ---SVLIVEDEES-----------------------------------------LADPLAFLLRKEGFEATVVT---------DGPAALAEFDRADIVLLDLMLPGMSGTDVCKQLRARS---------SVPVIMVTARPYSARELIARIRAVLRRGGDDDSEM-----SDGVLESGPVRMDV------- | |||||||||||||
7 | 1m5tA | 0.14 | 0.07 | 0.53 | 0.62 | FFAS-3D | --KKVLIVED-----------------------------------------NELNMKLFHDLLEAQGYETLQT--------REGLSALSIARENKDLILMDIQLPEISGLEVTKWLK------EDDDLAHIPVVAVYISKPSVVHFLETIKRLLERQ--------------------------------- | |||||||||||||
8 | 4yt2A1 | 0.10 | 0.08 | 0.83 | 0.54 | SPARKS-K | -----------------------NMKVSVYGAGNQNLYINKLNLPEKFGGEPPYGGSRMAIEFAEAGHDVVLAEPNKNIMSDDLWKKVEDAAKHGEIHVLF--TPFGK--ATFRIAKTIIEHVPENA------VICNTCTVSPVVLYYSLEPILRTKRKDAAVPGTPQHGHYVIGGKTTDGKELATEEQI | |||||||||||||
9 | 3c8fA | 0.12 | 0.08 | 0.66 | 0.69 | CNFpred | SGGGVTASGGEAILQA-------------------------------------EFVRDWFRACKKEGIHTCLDTNG----VRRYDPVIDELLEVTDLVMLDLKQMNDSNHRTLEFAKYLANK-----NVKVWIRYVVVPGWDDDDSAHRLGEFTRDM------------------GNVEKIELLPYHELG | |||||||||||||
10 | 5ck3B | 0.07 | 0.05 | 0.76 | 0.83 | DEthreader | --PSVLLIGAKTATLER-------------------------------S--PVAQ-PTSVELAVARKFLLIDTPG-HPKLRGTTLQHLLLTISKLKAVIFLLDLYSQTASYLYDVLLSLQKRFHSRKAPSSIPVLIAANAVLVSRLEHELGRRGWLGAVGS-EFK------FEEMEFDMEVEVMGGNGP- | |||||||||||||
|
|
References: | |
1. | Wei Zheng, Yang Li, Chengxin Zhang, Robin Pearce, S. M. Mortuza, Yang Zhang. "Deep-learning contact-map guided protein structure prediction in CASP13." Proteins: Structure, Function, and Bioinformatics, 87: 1149-1164 (2019). |