>PF19186 (202 residues) MKYITGNYLDLGKKESEIRYNLKSIIKYIYCQIPLDHDKMKKLYKYVEVDCDYDYKKDDD YDYLGPDFMPNKMQDDEYVYKFKHELNESYFPEPHSGEDINNELIREMHEFLIEKSPKKL ILKDIRTIKLIKNKGVNKDRRGVRDLDWKLHFWQEYIISSKRSLKLHDLIIAAYKIKSHK FEKWYEMFCRVSYDDFIIFHNS |
Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | 20 40 60 80 100 120 140 160 180 200 | | | | | | | | | | | |||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Seq | MKYITGNYLDLGKKESEIRYNLKSIIKYIYCQIPLDHDKMKKLYKYVEVDCDYDYKKDDDYDYLGPDFMPNKMQDDEYVYKFKHELNESYFPEPHSGEDINNELIREMHEFLIEKSPKKLILKDIRTIKLIKNKGVNKDRRGVRDLDWKLHFWQEYIISSKRSLKLHDLIIAAYKIKSHKFEKWYEMFCRVSYDDFIIFHNS | |||||||||||||||||||
1 | 4ygqA | 0.09 | 0.05 | 0.58 | 0.61 | DisCoVER | MKAVLFDIDGTIL----T----------------------EEPLIMLFLPQVYDKLSRKLGISKDEARFRRDSYDWHDWNFLQVYDTIP-------------------T-----------LLRYKLGIVTSGPKQRLKLTGLLDYFVITRDAIKIFTILVEPG----------------------------EAVMVGDTLY- | |||||||||||||
2 | 5a7mA | 0.08 | 0.05 | 0.64 | 0.67 | DEthreader | YPETL--------AT--L--TL--S---F--PDCEHKNNLVCRAQALISLFTLEE---------LILNGPGVPRLGLPNYQVWNEALH-GLD--GQFATTQARALIKVAASRSFPEWG-YVSSDCD------------------------------GQTYLISVRLANLVRLGYDKKNQYRS-LGWKDVV-YG--------- | |||||||||||||
3 | 2jjdF1 | 0.07 | 0.06 | 0.88 | 0.57 | CEthreader | FIDGYRQKDYFIATQGPLAHTVEDFWRMIWEWYQYWPTEGSVTHGEITIEIKNDTLSE---AISIRDFLVTLNGEQVRVVRQFHFHGWP-EIGIPAEGKGMIDLIAAVQKQQQQTGNHPITVHGAGRTGTFIALSNILERVKAEGLLDVFQAVKSLRLQRPHMVQTLEQYEFCYKVVQDFID-------------------- | |||||||||||||
4 | 5h03A | 0.09 | 0.08 | 0.88 | 0.62 | EigenThreader | SKAESTSINNYIKNSSEINSYSI------KKKFALDNNEDLKNISTAVKKSMLTKPMTEPDINTNTPAASYNDEENLRVLIDDLIKQ---LNFENDVISASQWGEENYAPWLKESSALKKRKIPEDIITYRMGDYDFNKVENVSKFKEKWLKLILRLHLNGSNAAYVGYKNEYS---------------SLGGKTNKLIIDI | |||||||||||||
5 | 3jc5c | 0.14 | 0.08 | 0.55 | 0.32 | HHpred | --------------------------------------QFSEAYNKILRNSSS------ASSCQLVIFVSCLNIDA--LCATKMLLLVQSQIVPIFGY-------SELRRHYSQLD------DNINSLLLVG-FGGVIDLEAFLEIDPQQFRRDIYVLDAHRPWNLDNIFGS------------------------------ | |||||||||||||
6 | 1vt4I | 0.13 | 0.09 | 0.66 | 0.40 | MRFsearch | --------------EEMVQKFVEEVLRINYKFLRMYIEQRDRLYNDN-----------------------------QVFAKYN--------------VSRLQPYLKLRQALLELRPAKNVLIDGGKTWVALDV-----------CLSYKVQFWLNLKNCNSPETVLEMLQKLLYQIDIHSIQAELRRLLKSYENCLLVLLNV | |||||||||||||
7 | 5espA | 0.14 | 0.12 | 0.89 | 0.46 | FFAS-3D | -----DKYPLITKKQADYK-LFKMAHNLIKNKSHLTKEGLLELVAIKAVINNGLFPGINTILRPDTSLPQILNPDAEGCFSVVVFKSKTSKLGEAVKSNRDEYLIKSLIEYL---GCGNTSLDPRGTIDFKVTN--------FSSIKDIIPFFIKYPLKGNKNLDFTDFVVRLMENKSHLTKEGLDQIKKIRNR-----MNT | |||||||||||||
8 | 4trbA | 0.12 | 0.10 | 0.84 | 0.53 | SPARKS-K | -QKIPVKVV----TWDEIVSLSTKLAEKIKADYNVNLVPARLVADVLGVF-DILSWIETASHTPEAKVKYPFKVSDKNVLIIDDITDTG-------------DSIELARKYVMENFR----PTEVKTATLQYIKPAAK-----IIPD-----YYAEEIVSWAWFMYEDEINLVNKILIERLKRNFVESYGIPPISLDKILTE | |||||||||||||
9 | 6lbkA | 0.06 | 0.04 | 0.72 | 0.64 | CNFpred | ----------------KLSQQILELFETCQQQA-SDLKKKELCRAQLQREIQLLFPQSRLFLVGSSLNGFGA-SDGDLCLVVK-------------QKTEARHILTLVHKHFCTRLSGYIERPQLPIVKFRDKV---------------SCVEFALNVNNTVGIRNTFLLRTYAYLEN-RVRPLVLVIKKWA---------- | |||||||||||||
10 | 1w27A | 0.07 | 0.05 | 0.75 | 0.83 | DEthreader | --------IAAEAMTGSHLDEVKMTISQVAAISARDSTLPHLPLRGTI-------------------------------MAMVLFENILAVEAAPQWLGPQIEVIRSSTKMIEREINNFGTPIGVSDNRLAAGKMFFSFAEI--AMASYCSELQFANPVTNVNSLGLISSRKTSEAVEILKMSTFMSKGIID--L------- | |||||||||||||
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References: | |
1. | Wei Zheng, Yang Li, Chengxin Zhang, Robin Pearce, S. M. Mortuza, Yang Zhang. "Deep-learning contact-map guided protein structure prediction in CASP13." Proteins: Structure, Function, and Bioinformatics, 87: 1149-1164 (2019). |