Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threading program | | 20 40 60 80 100 120 140 160 180 200 220 240 260 280
| | | | | | | | | | | | | | |
| Seq | YKYKCMLRKPSMAMDNTADTQRVTACCTGLFNDETSLNKCAPGWCPDTKLCHDAMISHCSSAFGWQDGSNPRDYSTSSCARYVNNSKKELAADFLQKTLPSAFGSYRLITGEAIPPPIQSLNNYLSDTCKLFPGSCSSFLSGFCQNLSREDMTQSQVYADVCGCYMPESQYPFSDKVPRPCDPICNLPNAIPFATPGSDTEERCTDTVCILDNISIDVKNSSGGKIALNQLCGNSRGKDSKFSQCYFDNVTVDGVNAMLTSGDTIQQGCDICFSGGTAENPNEVSCG |
1 | 1ktkE | 0.05 | 0.03 | 0.68 | 0.72 | DisCoVER | | -----------------G-AVVSQHPSRVIA----KSGTSVKIECRSLDFQATTMF-WYRQFPMLMATSAEGSKATYEQGLINHASLTLST--LT-----------VTSAHPEDSSFYICSALFGP--GT-RLTVLEDLKN--FP---------------PEVAVFEPSEISHTQKATLVCLATFYPDHVELSWWVNGGVSTQPLKRYALSSRLRVSAFWQNPRNHFRCQVQFYGLSE-PVTQIVSA--------EAWGRA-------------------------- |
2 | 4wz9A | 0.07 | 0.06 | 0.79 | 0.83 | DEthreader | | ------------NAFEATALEAGIQI-AGAMENLVTYR-EQALLFNP--ST-YRGKTNVAT-TIAHEYAHQWF-FAYEFYALDMAYPGQEYWELFNQVIQYAMGQDGQTRPMNWLDRVAYDKSGSVL-N-----MMRHVLGD---VLPNVTVAQIMRTWTN-AGYPER---PNTNIWM--IPYNYVFNFFQWLATAARIETWIVFKQQGYYR---------------VNYDNWLIALNASIHNQLDDWLARSG----------RLDLVARFMLAPWTAANVALFM-F |
3 | 4kc7A | 0.06 | 0.06 | 0.94 | 0.69 | CEthreader | | ----------------QPTFRWAVVHDPSIIKVGNMYYVFGTHLQVAKSKDLMHWEQINTSAHDKNPIIPNINEELKETLSWARTRNDIWAPQVIQLSDGRYYMYYCASTFGSPRSAIGIA--VSDDIEGPYKHYAVIVKSGQVYSVDGPSEDGTPYDSRKHPNALDPGVFYDKEGNLWMVYGSWFGGIYILKLDPNTGLPLPGQGYGKRLVGGNHSSMESPDTDYYYLFLSFGGLDYRGGYNIRVARSMENCMGSKTVISNYGAKLVGNFILSESNTIDFKAFGYV |
4 | 1dkrB | 0.07 | 0.06 | 0.82 | 0.62 | EigenThreader | | -------------SNQYGDKNLKIFSLNSNPELAKEIQLGKESIRGCDCYI-------IQSTSDP--VNEHIMELLIMVDALKRASAKTINIVIP---------YYGYARQDREPITAKLFANLLETAG---ATRVIALD-----LHAPQIQGFFDIPIDHLMGYFEGKNLEDDHGGVTRARKLADRLKAPIAIIDKRMNIVGNIEKTAILID-DIID----TAGTITLAANALVE---NGAKEVYACC--THPVLSGPAVERINNSTIKAIIRVHEQQSVSYLF-- |
5 | 5mv9A1 | 0.09 | 0.03 | 0.36 | 0.23 | HHpred | | -------------------------------------------------------------DRLWS-HTREP--LKQA----LLKKGSEELSQEACLAFIKYMGDYP---SKRTR-SVNELTDQIFEGPLKAEPLKDEAYVQILKQLT-----DNHLLWLCTGLFPPSNILVQRFLQSRK----------------------------------------------------------------------------------------------------------- |
6 | 3l6aA1 | 0.11 | 0.04 | 0.36 | 0.55 | MRFsearch | | -------------------------------------------KEELLKLTETVVTEYLNSG------------NANEAVNGVREMPKHFLPEMLSKVIILSLDR--------SDEDKEKASSLISLLKQEGIATSDNFMQAFLNVLCPKLEVDIPLVKSYLAQFAA------------------------------------------------------------------------------------------------------------------------ |
7 | 4bkxA | 0.11 | 0.06 | 0.49 | 0.42 | FFAS-3D | | YQAD----ITDLLKEGEEDGRD-------------QSRLETQVWEAHNPLTDKQIDQFLVVARSVGTFARALDSLHMSAAAASRDITLFHAMDTLHKAISALVPQGGPVLCRDEMEEWSASENLFEEALEKYGKDFTDIQQDFLPWKSLTSIIE--YYYMW------------------------------------------------------------------------------------------------------------------------------ |
8 | 7c7lA1 | 0.13 | 0.11 | 0.85 | 0.78 | SPARKS-K | | KTLKLRIVRPYNSEKNNREKIALKEACSKHLKVTTQVEACFCKARKLDDKFYQKLRGQF--------PDAVFWQEISEIFRQLQKQAAEIYNQSLIELYYEIFIKGKGIANAS------SVEHYLSDVCYTKNAAIASGLRSKIKNFRLKELKNMKSGLP-------------TTKSDNFPIPLVKQYTGFEISNHNSD---------FIIKIPFGRWQVKKEIDFDFEQV-----QKSPKPISLLLSNKGWSKDEGTMNGDYQTSY--IEVKRGSKIGEKSAWMLN |
9 | 3v09A | 0.13 | 0.05 | 0.36 | 0.69 | CNFpred | | ----------------------LKKCCATD-----DPHACYAKVLDEFQPLVDEPKNLV----------------KQNCELYEQLGDYNFQNALLVRYTKKVPQV---------------STPTLVEISRS----LGKVGSKCCKHPEAERLPCSVVLNRLCVLHE------------------------------------------------------------------------------------------------------------------------- |
10 | 5vchA | 0.06 | 0.05 | 0.80 | 0.83 | DEthreader | | PEIPHDDFLNKSLIPSVQTADLVKLALIA-N-VDDIRVFAQF-TSAVYRKSKIALGPEIT-LAALKVASEEIDNTPATALRLISN-ASGE-LS-PSQVGVPIIEHLP-TL--SSSPERRSILLAIS-VL---VTGSPDYTLSQF-DK---IIPATVTGLACILSTNLQ-DE-------VARYHEQYLVAAGLEFAAIVSAISCAAGG---NTAFEYIFLFLKFQIFAVFEKESERIE----NSTENLEKRKQFQSEEIKQQVIE----------------------- |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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