Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80 100 120 140
| | | | | | | |
| Seq | FGVPDASWLTALTGDRPDAEVPFFDKAVGEAPEDKAAYTERPYPVSSTQSPTTTQSPTTTTTLKPTTMAVLASIGATPTPVVCHDVRGDMPGIGCDNLVAMGFTVLRREGLPQGGYHTVVMKKHGANRKWIPYITSVKTNPRRGDGVEGWHIMRKKRS |
1 | 3ghpA | 0.06 | 0.05 | 0.79 | 0.67 | DisCoVER | | SYI----TM--G----------YD----KNAAEVGEIIKATVKIN----KIT-------NFSG-YQVNIKYDPTVLQAVLPTSGELLVDYGPIVQGVHKISEGILNLSRSYTPEETGTLAVVGFKVLQKTTVVFEDTGTTLFNWYRIYFVIQPGEIN- |
2 | 1pavA | 0.03 | 0.01 | 0.49 | 0.54 | CEthreader | | ---------------------------------------------MDVKPDRVIDARGSYCPGPLMELIKAYKQAKVGEVISVYSTDAGTKKDAPAWIQKSGQELVGVFDRNGYYEIVMKKVK----------------------------------- |
3 | 4tw5A | 0.06 | 0.06 | 0.92 | 0.50 | EigenThreader | | LNPTNFKEELS---KGLHII---DFYSPYCPHCKHLAPVWMETWEEFRTKESLIAFARRESMAKSESQYLELIAGKATRPHLVSFWTKDMKNSDWKIISRINTGHVNCEDLVDREPKVALVLPNKTSNN----LFDYPNGYSAKSDGYVDFARRTF-- |
4 | 1soxA | 0.21 | 0.20 | 0.95 | 0.37 | HHpred | | VGARSVKWLRRVAVSPDESPSHWQQNDYGFSPCDTVDYRTAELPVQS---AV--TQPRPGAAVGELTVKGYAWSGGG-REVVRVDVSLDGGTKVA-RLMAWAWALWELTPVEAGTELEIVCKAVDSSYNVQPDSVAPIWNLR-GVLSTAWHRVRVSVQ |
5 | 2pffB | 0.23 | 0.03 | 0.14 | 0.87 | MRFsearch | | -----------------------------------------------------------------------------------------------------GLGVLTHRNKDGTGVRVIVAGT----------------------------------- |
6 | 6y5q8 | 0.18 | 0.15 | 0.79 | 0.33 | FFAS-3D | | --AQDPKLLVHLKATRNSVPVPRHWCFKRKYLQGKRGIEKPPFELPDFIKRDIDYQKLHDAFFKWQTKPKLTIHGDL------YYEGKEFEGDLSDELRI-------SLGMPVGPNAHKVMQRYGPPPSY-PNLKIPGLNS----------------- |
7 | 5aftV | 0.04 | 0.03 | 0.90 | 0.64 | SPARKS-K | | SGNKVSR--QSVLCGSQNIVTIIMNDCIIRGDLANVRVGRHCVVIRPPFKKFSKGVAFFPLHIGDHVF-----IEEDCV-VNAAQIGSYVH-VGKNCVIGRRCVLKDCCKILDNTV-------LPPETVVPPFTVFSGCPGLFSGELPECTQELMIDV |
8 | 1ufkA | 0.09 | 0.03 | 0.34 | 0.54 | CNFpred | | -------------------------------------------------------------------APRYREALVPGGRALLTGILKDRAPLVREAMAGAGFRPLEEAAE--GEWVLLAYGR----------------------------------- |
9 | 4dfeA | 0.07 | 0.06 | 0.77 | 0.67 | DEthreader | | -SRVLG-TGS-LTSLAFISQR-AIEAADIDPQSIDLIIAAFAVATDSASALHADLVNVEKVAALEKA-------------IPHQMQSTCKLGLPQERM---IVTVGEHGNT--SAASLALAVIKR-GQN-VLIEGVG-----G--GFT-WG-AS---- |
10 | 3s6pA2 | 0.15 | 0.13 | 0.88 | 0.56 | MUSTER | | -DVSEAYALHTLTFARPSSAAALALPQGGTAPAGTPAWEQASSGGYLTWRHNGTTFPAGSVSYVPEGFALERYDPNDGSWTDFAS-AGDTVTFRQVAVDEVVVTNNPAGGGSAPTFTVRVPPSNAYTNTVFRNTLLETRPS----------------- |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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