>PF19169 (353 residues) KFEVAIQNEINKYFILLAEKNIYSKKNIKRMFGSIISNLSEMNENTFYLRNMSINESSCD YNDKSLYDTVVIPKRLGIRDLEIIPRESIYLFNGSNRTESKIIETQNKKHSIVFDQSLAK ITRSGTWLTDYDIFKIDLNIIVNHVLFNNQNVIYPIVADFVNINIERINSSTYVETINTE PVIVNYLENPNINIKSYDKKTLIHKLVKNIFDGEHYLPWYVTNYNKSLARVLFLLNTERR PYISFLRKLLTTNNKKKLVNYSMFYCFNYQAYSFYNLIWIEPSIHKQYYEIEHIIKFIII MDELVKLPDLELHKIFSDFNISYGWCERDVDVPEIKESYSKFRRELLDIVNTL |
Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | 20 40 60 80 100 120 140 160 180 200 220 240 260 280 300 320 340 | | | | | | | | | | | | | | | | | | |||||||||||||
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Seq | KFEVAIQNEINKYFILLAEKNIYSKKNIKRMFGSIISNLSEMNENTFYLRNMSINESSCDYNDKSLYDTVVIPKRLGIRDLEIIPRESIYLFNGSNRTESKIIETQNKKHSIVFDQSLAKITRSGTWLTDYDIFKIDLNIIVNHVLFNNQNVIYPIVADFVNINIERINSSTYVETINTEPVIVNYLENPNINIKSYDKKTLIHKLVKNIFDGEHYLPWYVTNYNKSLARVLFLLNTERRPYISFLRKLLTTNNKKKLVNYSMFYCFNYQAYSFYNLIWIEPSIHKQYYEIEHIIKFIIIMDELVKLPDLELHKIFSDFNISYGWCERDVDVPEIKESYSKFRRELLDIVNTL | |||||||||||||||||||
1 | 4edgA | 0.07 | 0.05 | 0.67 | 0.75 | DisCoVER | ------------------------------------------------DDMIEM------H---ELIQEFYYYALTKTVEGEALFTDALIKE-------RGIGFA---PDSSHFCHDFLQYDIELAYEAGLLYDRFRNRIMFPLKNAQGRIVGYSGRTYPKYLNSPET-PIFQKRKLLYNLDKARFMDVLKNVVATMGTQLSDEH-----------ITFIRKLTS--NI--T-------------L--MF-DGDFAGSEATLKTGQHLLQGLNVFVIQLPSGMDPDEY-FVDKKSFAHYKVSEIA-SYERYLKELSHDIS-LMK----------SSILQQKAINDVAPFF--- | |||||||||||||
2 | 6s2cA | 0.07 | 0.05 | 0.73 | 0.67 | DEthreader | LKPYTGLI--AIPFTNLI--S-NRLQIT--ET-V-LESMLLKLS-LHSKAMNVD--ASINRTIAPAVVGVNNSPVF--------PFGALYTVTKQTGQQVFI---------TIHIG--LYWAGRFDIIAHNVALSV-PK--AQAAN----S-QQSDVCLTVDM--FVVGDARTSFW-------------------ERL--QAIPMCIAWTMYYSRGTTAWDYANVYPVLIPDIWCQYFTAKLPLFAGAFKGIHRNLVA-------------MTTGNVQY----IVEAVP--AG-EL-PV--GKQIPLLAGENAPIELTNA----LTQSVIPVACANLAR--SCWLLSNV---- | |||||||||||||
3 | 1vt4I | 0.02 | 0.02 | 1.00 | 0.75 | CEthreader | GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG | |||||||||||||
4 | 6dtdA | 0.05 | 0.05 | 0.93 | 0.60 | EigenThreader | LKNVLFIFLEKLQVLRNYYSHYKYSESLLKNMYKVFDANVRLVKRDYMNFHYHFADKEGNMTIAGLLFFVSLFLDFCRSRISLPKLKLFKVPFDIFEPF-KNTLVRHQD------RVLRYFDLNEILRFQI-DLGTYHFSIYNKRIG--DEDEVRHLTHHLYGFAIKFCSAHNNLFPSLQTDKT---CNGRSKF---NLTQRRLDLLCKQTNQKIRIGKRNAGLIADWLVNDMMRFQANSTEYRMLQRALALFGSENFRLKAYFNQMNLVHPFLAETQWEHQTN--ILSFYRNYLEARKKYLKGVQKTNRNTLVTGWKYDQILS--FDRVGFVAKAIPLYFAEEYK------D | |||||||||||||
5 | 2pffB | 0.15 | 0.11 | 0.72 | 0.41 | HHpred | ------------------------------------------------DAYSTRPLTL---------------SHGSLEHVLLVPTASFFIASQLQEQFNKLPEPTEGFEPTTPAELVGKFLGYVSSL---VEPS---------KVGQFDQVLNLCLTEF--------ENCYEGNDIHALAAKLLQEN-DTTLVKT---KELIKNYITARIMAKNSALFRAVGEG-----NAQLVAIFTDDYFEELRDLYQTYHVGDLIKFSAETLSELKVFTLNILEWLENPTPDKDYLLSIPIPLIGVTAKLLGFTPGELR--------SYLKSQGLVTAVAIAESWESFFVSVRKAITVL | |||||||||||||
6 | 4m8mA | 0.10 | 0.07 | 0.76 | 0.37 | MRFsearch | --MIRVDEKCLAFAELIRDKQFLSLLYLTEIMEDLLQSLMDQSEKALYTLS-----------------------------------------------EDWLLCQAQDFEPLKLKVVFAEISSLEVIALTCDTRDIEIEYEKEFVMLQEVDDTSEIRGHVTMLNTLK-----HYQVGDGACIKVITPSFSIKYFHLVAVHSFVENLFKSIWGLP------NNKAPLAVKYFFDFLDEQAELPLRFWVNILKN----------------------PDFVFSDMEKSPHLDGCLSVIAQAFYYKLVKDQSSQELKTFLQEESKKHQNENESAALRELYKYMQRYFTEIFQKLEQ- | |||||||||||||
7 | 2yinA | 0.09 | 0.07 | 0.85 | 0.56 | FFAS-3D | -WEEAI--SLCKELAEQYEMEIFDYELLSQNLIQQAKFYESIMKILYYGQGFPSFLRNKVF----IYRGKEYERREDFQMQLMTQFPNAEKMNTTSAPGDDVKNAPGQYIQCFTVQPVLDEDQIINFYKSNYVQRFHYSRPVRR---GTVDPENEFASMWIERTSFVTAYK--------LPGILRWFEVVHMSQTTISLENAIETMSTA---------------NEKILMMINQYQSDETLPINLLNGIVDPAVMGGFAKYEKAFFTEEYVRD-------HPEDQDKLTHLKDLIWQIPFLGAGIKIHEKRVSDNLRPFH------------DRMEECFKNLKMKVEKEYGV- | |||||||||||||
8 | 6thhC | 0.12 | 0.12 | 0.99 | 0.64 | SPARKS-K | SKLQVAREVIERNGLLIYFVNKFSKGDVQKALDKILELLEKRYAELYYVKFSDDPNDYCVVCGPIYSSNPVLKDRVKPPYFIVTFYPNIIDFDFSQSSIKYYIDEEKDTYFTAFEKGGRLEPYVKKVLPAY--FSSKVIIKASEVSLSTRLSKLPYAPISIFLTSPVLISSNLYEPIHERVISITSTYNYTFSLNSNLLTLYSIFAYSAKYDARKIC--GRSDLDNCLGYLTEELYSSVDPALGVLS-IGGVGTPIDTDEKFFSAFLPVSGYLLKVTGKVSETLKSSIFSIAYALKDIIFLRDGVDFKEDRIGISVNAAISSLEYALDDQHRAQVYSALQDIFKTLYSIEEES | |||||||||||||
9 | 1pwuA | 0.13 | 0.12 | 0.88 | 0.65 | CNFpred | -----INQRLQDTGGLIDSPSINVRKQYKRDIQNIDALLHQSI-KIYLYENMNIGADLVDSTDNTKINRGIFNEFKKNFKYSISS--NYMIVDIN---ERPALD--NERLKWRIQLTRAGYLENGKLILQR---NIGLEIKDVQIIKQS-------EKEYIRIDAKVVPKSKIDTKI-TKLITFNVH-----NRYASNIVESAYLILNEWKNN------IQSDLIKKVTNYLRFVFTDI--TLPNIAEQYTHQEIYEQVHSKGLYVPE-----SRSILLHGPSKGVELDSEGFIHCFGHAVDDYAGTNSKKFIDIFKE-AFRLMHSTDHAERLKVQKNAFQFINDQIKFIINS | |||||||||||||
10 | 4r04A | 0.04 | 0.03 | 0.70 | 0.67 | DEthreader | IGGELVNTLKKAIVESSTTEARMEIYDRQKRFINYYKIDDIDIRNSLFEQELLN--------------DIVRLALGVYLDVDMLLDRWMI--------NYTSENF-------------------------------L-VINQALISKQSLEFKFLQSLWSDASKYLSEDNGVDFGDDISGHGEFSVLSIEVNLLGCNQYLAHS---NK-EA---------------IMSDLSSK-EY-----I---F--F---------KAKSKNIPGLASISEDIKTLLLDAVSPKFLNNLKLNIESSIGDYIYYEKLEPVNEGSDFILVR-KIRIKGISNTQSFNK---G---S------- | |||||||||||||
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References: | |
1. | Wei Zheng, Yang Li, Chengxin Zhang, Robin Pearce, S. M. Mortuza, Yang Zhang. "Deep-learning contact-map guided protein structure prediction in CASP13." Proteins: Structure, Function, and Bioinformatics, 87: 1149-1164 (2019). |